RNA–Protein interactions for RNA: ENST00000370792.7

USP33-202, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 1 (best) BASIC

Gene USP33, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-202ENST00000370792 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
USP33-202ENST00000370792 JAKMIP1Q96N16 626 aaKnown RBP17.22■□□□□ 0.35
USP33-202ENST00000370792 LIMCH1Q9UPQ0 1083 aa17.22■□□□□ 0.35
USP33-202ENST00000370792 SMC3Q9UQE7 1217 aa17.22■□□□□ 0.35
USP33-202ENST00000370792 STX6O43752 255 aa17.22■□□□□ 0.35
USP33-202ENST00000370792 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
USP33-202ENST00000370792 PSME1Q06323 249 aa17.22■□□□□ 0.35
USP33-202ENST00000370792 AIMP1Q12904 312 aaKnown RBP17.22■□□□□ 0.35
USP33-202ENST00000370792 CLASRPQ8N2M8 674 aaKnown RBP17.22■□□□□ 0.35
USP33-202ENST00000370792 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
USP33-202ENST00000370792 RBM10P98175 930 aaKnown RBP17.21■□□□□ 0.35
USP33-202ENST00000370792 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
USP33-202ENST00000370792 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
USP33-202ENST00000370792 AACSQ86V21 672 aa17.2■□□□□ 0.34
USP33-202ENST00000370792 CCDC39Q9UFE4 941 aa17.2■□□□□ 0.34
USP33-202ENST00000370792 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
USP33-202ENST00000370792 ZNF500O60304 480 aaPredicted RBP17.2■□□□□ 0.34
USP33-202ENST00000370792 CACNA1FO60840 1977 aa17.2■□□□□ 0.34
USP33-202ENST00000370792 LTN1O94822 1766 aa17.2■□□□□ 0.34
USP33-202ENST00000370792 HSP90AB4PQ58FF6 505 aa17.2■□□□□ 0.34
USP33-202ENST00000370792 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
USP33-202ENST00000370792 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
USP33-202ENST00000370792 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
USP33-202ENST00000370792 SIL1Q9H173 461 aa17.2■□□□□ 0.34
USP33-202ENST00000370792 PXDNQ92626 1479 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 GJB2P29033 226 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 FAM227BQ96M60 508 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 ZNF830Q96NB3 372 aaPredicted RBP17.19■□□□□ 0.34
USP33-202ENST00000370792 ECHDC1Q9NTX5 307 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 HYPKQ9NX55 129 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
USP33-202ENST00000370792 USP25Q9UHP3 1055 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 TCHHQ07283 1943 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 RNMTO43148 476 aaKnown RBP17.19■□□□□ 0.34
USP33-202ENST00000370792 F13A1P00488 732 aa17.19■□□□□ 0.34
USP33-202ENST00000370792 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
USP33-202ENST00000370792 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
USP33-202ENST00000370792 KLHDC4Q8TBB5 520 aa17.18■□□□□ 0.34
USP33-202ENST00000370792 TCEANC2Q96MN5 208 aa17.18■□□□□ 0.34
USP33-202ENST00000370792 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.18■□□□□ 0.34
USP33-202ENST00000370792 TTC41PQ6P2S7 1318 aa17.18■□□□□ 0.34
USP33-202ENST00000370792 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
USP33-202ENST00000370792 SUCLG2Q96I99 432 aa17.18■□□□□ 0.34
USP33-202ENST00000370792 TLR7Q9NYK1 1049 aaKnown RBP17.18■□□□□ 0.34
USP33-202ENST00000370792 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
USP33-202ENST00000370792 EPB41L2O43491 1005 aaKnown RBP17.17■□□□□ 0.34
USP33-202ENST00000370792 PHF14O94880 888 aa17.17■□□□□ 0.34
USP33-202ENST00000370792 HOXB7P09629 217 aa17.17■□□□□ 0.34
USP33-202ENST00000370792 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
USP33-202ENST00000370792 RGPD2P0DJD1 1756 aa17.17■□□□□ 0.34
USP33-202ENST00000370792 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
USP33-202ENST00000370792 KCNJ4P48050 445 aa17.17■□□□□ 0.34
USP33-202ENST00000370792 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
USP33-202ENST00000370792 PLCB2Q00722 1185 aa17.17■□□□□ 0.34
USP33-202ENST00000370792 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
USP33-202ENST00000370792 CCDC183Q5T5S1 534 aa17.17■□□□□ 0.34
USP33-202ENST00000370792 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
USP33-202ENST00000370792 GIMAP6Q6P9H5 292 aa17.16■□□□□ 0.34
USP33-202ENST00000370792 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
USP33-202ENST00000370792 RUFY2Q8WXA3 655 aa17.16■□□□□ 0.34
USP33-202ENST00000370792 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
USP33-202ENST00000370792 USP42Q9H9J4 1324 aaKnown RBP17.16■□□□□ 0.34
USP33-202ENST00000370792 ME3Q16798 604 aa17.16■□□□□ 0.34
USP33-202ENST00000370792 NFAT5O94916 1531 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
USP33-202ENST00000370792 EAF2Q96CJ1 260 aaPredicted RBP17.15■□□□□ 0.34
USP33-202ENST00000370792 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 CHMP3Q9Y3E7 222 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 RBM8AQ9Y5S9 174 aaKnown RBP17.15■□□□□ 0.34
USP33-202ENST00000370792 CYP46A1Q9Y6A2 500 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 SASH1O94885 1247 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 MTX1Q13505 466 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 TMEM87AQ8NBN3 555 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 JARID2Q92833 1246 aaPredicted RBP17.15■□□□□ 0.34
USP33-202ENST00000370792 GPATCH3Q96I76 525 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 KAZALD1Q96I82 304 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
USP33-202ENST00000370792 UQCRHLA0A096LP55 91 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 UQCRHP07919 91 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 UBE2HP62256 183 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 MTMR6Q9Y217 621 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 TAF6LQ9Y6J9 622 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 FAM173BQ6P4H8 233 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 ANKRD24Q8TF21 1146 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 FAM13BQ9NYF5 915 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 MYL6BP14649 208 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 FGD1P98174 961 aa17.14■□□□□ 0.33
USP33-202ENST00000370792 C17orf53Q8N3J3 647 aaPredicted RBP17.14■□□□□ 0.33
USP33-202ENST00000370792 GCP02774 474 aa17.13■□□□□ 0.33
USP33-202ENST00000370792 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
USP33-202ENST00000370792 CREB3L3Q68CJ9 461 aa17.13■□□□□ 0.33
USP33-202ENST00000370792 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
USP33-202ENST00000370792 EDC3Q96F86 508 aaKnown RBP17.13■□□□□ 0.33
USP33-202ENST00000370792 ZSWIM6Q9HCJ5 1215 aa17.13■□□□□ 0.33
USP33-202ENST00000370792 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1381.7 ms