RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 NPM2Q86SE8 214 aaKnown RBP17.48■□□□□ 0.39
RPF1-201ENST00000370654 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
RPF1-201ENST00000370654 TIAM2Q8IVF5 1701 aa17.48■□□□□ 0.39
RPF1-201ENST00000370654 CACNA1SQ13698 1873 aa17.47■□□□□ 0.39
RPF1-201ENST00000370654 GLTPD2A6NH11 291 aa17.47■□□□□ 0.39
RPF1-201ENST00000370654 FAM177BA6PVY3 158 aa17.47■□□□□ 0.39
RPF1-201ENST00000370654 POTECB2RU33 542 aa17.47■□□□□ 0.39
RPF1-201ENST00000370654 EIF4A1P60842 406 aaKnown RBP17.47■□□□□ 0.39
RPF1-201ENST00000370654 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
RPF1-201ENST00000370654 CLEC4GQ6UXB4 293 aa17.47■□□□□ 0.39
RPF1-201ENST00000370654 NGEFQ8N5V2 710 aa17.47■□□□□ 0.39
RPF1-201ENST00000370654 TNRC6CQ9HCJ0 1690 aaKnown RBP17.47■□□□□ 0.39
RPF1-201ENST00000370654 FER1L6Q2WGJ9 1857 aa17.47■□□□□ 0.39
RPF1-201ENST00000370654 ST5P78524 1137 aa17.46■□□□□ 0.39
RPF1-201ENST00000370654 STYK1Q6J9G0 422 aa17.46■□□□□ 0.39
RPF1-201ENST00000370654 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
RPF1-201ENST00000370654 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
RPF1-201ENST00000370654 NIP7Q9Y221 180 aaKnown RBP eCLIP17.46■□□□□ 0.39
RPF1-201ENST00000370654 NPHP1O15259 732 aa17.45■□□□□ 0.38
RPF1-201ENST00000370654 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
RPF1-201ENST00000370654 C16orf71Q8IYS4 520 aaPredicted RBP17.45■□□□□ 0.38
RPF1-201ENST00000370654 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
RPF1-201ENST00000370654 ZC3H4Q9UPT8 1303 aaKnown RBP17.44■□□□□ 0.38
RPF1-201ENST00000370654 TTLL7Q6ZT98 887 aa17.44■□□□□ 0.38
RPF1-201ENST00000370654 C7orf43Q8WVR3 580 aa17.44■□□□□ 0.38
RPF1-201ENST00000370654 MASTLQ96GX5 879 aa17.44■□□□□ 0.38
RPF1-201ENST00000370654 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
RPF1-201ENST00000370654 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
RPF1-201ENST00000370654 FSTL1Q12841 308 aa17.43■□□□□ 0.38
RPF1-201ENST00000370654 CNKSR1Q969H4 720 aa17.43■□□□□ 0.38
RPF1-201ENST00000370654 KLRG2A4D1S0 409 aaPredicted RBP17.42■□□□□ 0.38
RPF1-201ENST00000370654 ERFEQ4G0M1 354 aa17.42■□□□□ 0.38
RPF1-201ENST00000370654 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
RPF1-201ENST00000370654 RRP7AQ9Y3A4 280 aaKnown RBP17.42■□□□□ 0.38
RPF1-201ENST00000370654 ARFGEF2Q9Y6D5 1785 aa17.42■□□□□ 0.38
RPF1-201ENST00000370654 MYL6BP14649 208 aa17.41■□□□□ 0.38
RPF1-201ENST00000370654 VEGFAP15692 232 aaPredicted RBP17.41■□□□□ 0.38
RPF1-201ENST00000370654 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
RPF1-201ENST00000370654 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
RPF1-201ENST00000370654 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
RPF1-201ENST00000370654 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
RPF1-201ENST00000370654 DICER1Q9UPY3 1922 aaKnown RBP17.41■□□□□ 0.38
RPF1-201ENST00000370654 NEFMP07197 916 aa17.4■□□□□ 0.38
RPF1-201ENST00000370654 DDX10Q13206 875 aaKnown RBP17.4■□□□□ 0.38
RPF1-201ENST00000370654 TPTE2Q6XPS3 522 aa17.4■□□□□ 0.38
RPF1-201ENST00000370654 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
RPF1-201ENST00000370654 LTBP3Q9NS15 1303 aa17.4■□□□□ 0.38
RPF1-201ENST00000370654 NPR1P16066 1061 aa17.4■□□□□ 0.38
RPF1-201ENST00000370654 SMC1BQ8NDV3 1235 aa17.4■□□□□ 0.38
RPF1-201ENST00000370654 MAP3K15Q6ZN16 1313 aa17.39■□□□□ 0.37
RPF1-201ENST00000370654 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
RPF1-201ENST00000370654 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
RPF1-201ENST00000370654 NUP98P52948 1817 aa17.39■□□□□ 0.37
RPF1-201ENST00000370654 RGL2O15211 777 aa17.39■□□□□ 0.37
RPF1-201ENST00000370654 DDNO94850 711 aaPredicted RBP17.39■□□□□ 0.37
RPF1-201ENST00000370654 RIPK4P57078 832 aa17.39■□□□□ 0.37
RPF1-201ENST00000370654 LRP10Q7Z4F1 713 aa17.39■□□□□ 0.37
RPF1-201ENST00000370654 ZBTB3Q9H5J0 574 aa17.39■□□□□ 0.37
RPF1-201ENST00000370654 ANXA1P04083 346 aa17.38■□□□□ 0.37
RPF1-201ENST00000370654 POTEIP0CG38 1075 aa17.38■□□□□ 0.37
RPF1-201ENST00000370654 POTEJP0CG39 1038 aa17.38■□□□□ 0.37
RPF1-201ENST00000370654 GPTP24298 496 aa17.38■□□□□ 0.37
RPF1-201ENST00000370654 PDIA6Q15084 440 aa17.38■□□□□ 0.37
RPF1-201ENST00000370654 PROSER3Q2NL68 480 aa17.38■□□□□ 0.37
RPF1-201ENST00000370654 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
RPF1-201ENST00000370654 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
RPF1-201ENST00000370654 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
RPF1-201ENST00000370654 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
RPF1-201ENST00000370654 RALBP1Q15311 655 aa17.37■□□□□ 0.37
RPF1-201ENST00000370654 IFFO2Q5TF58 517 aa17.37■□□□□ 0.37
RPF1-201ENST00000370654 SUSD4Q5VX71 490 aa17.37■□□□□ 0.37
RPF1-201ENST00000370654 C3orf67Q6ZVT6 689 aa17.37■□□□□ 0.37
RPF1-201ENST00000370654 KLRG1Q96E93 195 aa17.37■□□□□ 0.37
RPF1-201ENST00000370654 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
RPF1-201ENST00000370654 TSPYL4Q9UJ04 414 aa17.37■□□□□ 0.37
RPF1-201ENST00000370654 DPY19L2Q6NUT2 758 aa17.36■□□□□ 0.37
RPF1-201ENST00000370654 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
RPF1-201ENST00000370654 KRT24Q2M2I5 525 aa17.35■□□□□ 0.37
RPF1-201ENST00000370654 CCDC93Q567U6 631 aa17.35■□□□□ 0.37
RPF1-201ENST00000370654 ZNF34Q8IZ26 560 aa17.35■□□□□ 0.37
RPF1-201ENST00000370654 GTF2E1P29083 439 aaPredicted RBP17.34■□□□□ 0.37
RPF1-201ENST00000370654 CRY2Q49AN0 593 aa17.34■□□□□ 0.37
RPF1-201ENST00000370654 SOGA3Q5TF21 947 aa17.34■□□□□ 0.37
RPF1-201ENST00000370654 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
RPF1-201ENST00000370654 SNED1Q8TER0 1413 aa17.34■□□□□ 0.37
RPF1-201ENST00000370654 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
RPF1-201ENST00000370654 ZNF541Q9H0D2 1346 aa17.34■□□□□ 0.37
RPF1-201ENST00000370654 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
RPF1-201ENST00000370654 NEUROD2Q15784 382 aa17.33■□□□□ 0.36
RPF1-201ENST00000370654 NECTIN2Q92692 538 aa17.33■□□□□ 0.36
RPF1-201ENST00000370654 NTSR2O95665 410 aa17.32■□□□□ 0.36
RPF1-201ENST00000370654 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
RPF1-201ENST00000370654 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
RPF1-201ENST00000370654 COL4A5P29400 1685 aa17.32■□□□□ 0.36
RPF1-201ENST00000370654 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
RPF1-201ENST00000370654 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
RPF1-201ENST00000370654 SYNE4Q8N205 404 aa17.31■□□□□ 0.36
RPF1-201ENST00000370654 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
RPF1-201ENST00000370654 ALDH1B1P30837 517 aa17.3■□□□□ 0.36
RPF1-201ENST00000370654 ERBB4Q15303 1308 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms