RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SNRPA1P09661 255 aaKnown RBP19.57■□□□□ 0.72
LMO4-201ENST00000370542 CARMIL3Q8ND23 1372 aa19.57■□□□□ 0.72
LMO4-201ENST00000370542 RGL2O15211 777 aa19.56■□□□□ 0.72
LMO4-201ENST00000370542 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
LMO4-201ENST00000370542 TBC1D2BQ9UPU7 963 aa19.56■□□□□ 0.72
LMO4-201ENST00000370542 DCTN1Q14203 1278 aa19.55■□□□□ 0.72
LMO4-201ENST00000370542 TAF7Q15545 349 aaPredicted RBP19.55■□□□□ 0.72
LMO4-201ENST00000370542 ERICH6Q7L0X2 663 aa19.55■□□□□ 0.72
LMO4-201ENST00000370542 ABHD8Q96I13 439 aa19.55■□□□□ 0.72
LMO4-201ENST00000370542 BRIP1Q9BX63 1249 aa19.55■□□□□ 0.72
LMO4-201ENST00000370542 CREBZFQ9NS37 354 aa19.55■□□□□ 0.72
LMO4-201ENST00000370542 BCORQ6W2J9 1755 aa19.55■□□□□ 0.72
LMO4-201ENST00000370542 ANKRD31Q8N7Z5 1873 aa19.54■□□□□ 0.72
LMO4-201ENST00000370542 PRAMEF22A3QJZ6 481 aa19.54■□□□□ 0.72
LMO4-201ENST00000370542 GLTPD2A6NH11 291 aa19.54■□□□□ 0.72
LMO4-201ENST00000370542 RGS19P49795 217 aa19.54■□□□□ 0.72
LMO4-201ENST00000370542 PRR5LQ6MZQ0 368 aa19.54■□□□□ 0.72
LMO4-201ENST00000370542 CLEC4GQ6UXB4 293 aa19.54■□□□□ 0.72
LMO4-201ENST00000370542 TTLL6Q8N841 843 aa19.54■□□□□ 0.72
LMO4-201ENST00000370542 H0YIN7 160 aa19.53■□□□□ 0.72
LMO4-201ENST00000370542 CTCFP49711 727 aaPredicted RBP19.53■□□□□ 0.72
LMO4-201ENST00000370542 MLLT1Q03111 559 aaPredicted RBP19.53■□□□□ 0.72
LMO4-201ENST00000370542 MKRN1Q9UHC7 482 aaKnown RBP19.53■□□□□ 0.72
LMO4-201ENST00000370542 BICDL1Q6ZP65 573 aa19.52■□□□□ 0.72
LMO4-201ENST00000370542 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.72
LMO4-201ENST00000370542 DLG5Q8TDM6 1919 aa19.52■□□□□ 0.72
LMO4-201ENST00000370542 NBPF26B4DH59 902 aa19.51■□□□□ 0.71
LMO4-201ENST00000370542 NBPF10Q6P3W6 841 aaKnown RBP19.51■□□□□ 0.71
LMO4-201ENST00000370542 DZIP3Q86Y13 1208 aaKnown RBP19.51■□□□□ 0.71
LMO4-201ENST00000370542 NBPF15Q8N660 670 aa19.51■□□□□ 0.71
LMO4-201ENST00000370542 SETDB2Q96T68 719 aa19.51■□□□□ 0.71
LMO4-201ENST00000370542 POTECB2RU33 542 aa19.5■□□□□ 0.71
LMO4-201ENST00000370542 PDE6BP35913 854 aa19.5■□□□□ 0.71
LMO4-201ENST00000370542 NFE2L2Q16236 605 aa19.49■□□□□ 0.71
LMO4-201ENST00000370542 NPM2Q86SE8 214 aaKnown RBP19.49■□□□□ 0.71
LMO4-201ENST00000370542 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
LMO4-201ENST00000370542 ZNF330Q9Y3S2 320 aaPredicted RBP19.49■□□□□ 0.71
LMO4-201ENST00000370542 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
LMO4-201ENST00000370542 NFKBIEO00221 500 aa19.48■□□□□ 0.71
LMO4-201ENST00000370542 RALBP1Q15311 655 aa19.48■□□□□ 0.71
LMO4-201ENST00000370542 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
LMO4-201ENST00000370542 CNTNAP1P78357 1384 aa19.47■□□□□ 0.71
LMO4-201ENST00000370542 KLRG2A4D1S0 409 aaPredicted RBP19.47■□□□□ 0.71
LMO4-201ENST00000370542 NEFMP07197 916 aa19.47■□□□□ 0.71
LMO4-201ENST00000370542 LMNB1P20700 586 aa19.47■□□□□ 0.71
LMO4-201ENST00000370542 PIP4K2AP48426 406 aaPredicted RBP19.47■□□□□ 0.71
LMO4-201ENST00000370542 CNBD1Q8NA66 436 aa19.47■□□□□ 0.71
LMO4-201ENST00000370542 COL11A2P13942 1736 aaPredicted RBP19.47■□□□□ 0.71
LMO4-201ENST00000370542 LBX1P52954 281 aa19.46■□□□□ 0.71
LMO4-201ENST00000370542 EIF4A1P60842 406 aaKnown RBP19.46■□□□□ 0.71
LMO4-201ENST00000370542 RASSF7Q02833 373 aa19.46■□□□□ 0.71
LMO4-201ENST00000370542 AIDAQ96BJ3 306 aa19.46■□□□□ 0.71
LMO4-201ENST00000370542 WBP1LQ9NX94 342 aa19.46■□□□□ 0.71
LMO4-201ENST00000370542 MIS18AQ9NYP9 233 aa19.46■□□□□ 0.71
LMO4-201ENST00000370542 LAMB4A4D0S4 1761 aa19.46■□□□□ 0.71
LMO4-201ENST00000370542 SRGNP10124 158 aa19.45■□□□□ 0.7
LMO4-201ENST00000370542 STYK1Q6J9G0 422 aa19.45■□□□□ 0.7
LMO4-201ENST00000370542 ZNF652Q9Y2D9 606 aa19.45■□□□□ 0.7
LMO4-201ENST00000370542 FER1L6Q2WGJ9 1857 aa19.44■□□□□ 0.7
LMO4-201ENST00000370542 CCDC24Q8N4L8 307 aa19.44■□□□□ 0.7
LMO4-201ENST00000370542 LTBP3Q9NS15 1303 aa19.44■□□□□ 0.7
LMO4-201ENST00000370542 ST5P78524 1137 aa19.43■□□□□ 0.7
LMO4-201ENST00000370542 CNKSR1Q969H4 720 aa19.43■□□□□ 0.7
LMO4-201ENST00000370542 ARFGEF2Q9Y6D5 1785 aa19.42■□□□□ 0.7
LMO4-201ENST00000370542 CCDC88AQ3V6T2 1871 aa19.42■□□□□ 0.7
LMO4-201ENST00000370542 C7orf43Q8WVR3 580 aa19.42■□□□□ 0.7
LMO4-201ENST00000370542 ZNF622Q969S3 477 aaKnown RBP eCLIP19.42■□□□□ 0.7
LMO4-201ENST00000370542 MASTLQ96GX5 879 aa19.42■□□□□ 0.7
LMO4-201ENST00000370542 SLX4Q8IY92 1834 aa19.41■□□□□ 0.7
LMO4-201ENST00000370542 ERVV-1B6SEH8 477 aa19.41■□□□□ 0.7
LMO4-201ENST00000370542 VEGFBP49765 207 aa19.41■□□□□ 0.7
LMO4-201ENST00000370542 HLFQ16534 295 aa19.41■□□□□ 0.7
LMO4-201ENST00000370542 CHADLQ6NUI6 762 aa19.41■□□□□ 0.7
LMO4-201ENST00000370542 NBPF5PQ86XG9 351 aaPredicted RBP19.41■□□□□ 0.7
LMO4-201ENST00000370542 THUMPD2Q9BTF0 503 aaKnown RBP19.41■□□□□ 0.7
LMO4-201ENST00000370542 BABAM1Q9NWV8 329 aa19.41■□□□□ 0.7
LMO4-201ENST00000370542 PPP4R2Q9NY27 417 aa19.41■□□□□ 0.7
LMO4-201ENST00000370542 DICER1Q9UPY3 1922 aaKnown RBP19.41■□□□□ 0.7
LMO4-201ENST00000370542 C21orf2O43822 256 aa19.4■□□□□ 0.7
LMO4-201ENST00000370542 HSPA8P11142 646 aaKnown RBP19.4■□□□□ 0.7
LMO4-201ENST00000370542 TPTE2Q6XPS3 522 aa19.4■□□□□ 0.7
LMO4-201ENST00000370542 NIP7Q9Y221 180 aaKnown RBP eCLIP19.4■□□□□ 0.7
LMO4-201ENST00000370542 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
LMO4-201ENST00000370542 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
LMO4-201ENST00000370542 ERBB4Q15303 1308 aa19.39■□□□□ 0.69
LMO4-201ENST00000370542 CCDC85CA6NKD9 419 aa19.38■□□□□ 0.69
LMO4-201ENST00000370542 SOGA3Q5TF21 947 aa19.38■□□□□ 0.69
LMO4-201ENST00000370542 PASKQ96RG2 1323 aa19.38■□□□□ 0.69
LMO4-201ENST00000370542 TIAM2Q8IVF5 1701 aa19.37■□□□□ 0.69
LMO4-201ENST00000370542 MAP3K15Q6ZN16 1313 aa19.37■□□□□ 0.69
LMO4-201ENST00000370542 MYBBP1AQ9BQG0 1328 aaKnown RBP19.37■□□□□ 0.69
LMO4-201ENST00000370542 NPR1P16066 1061 aa19.37■□□□□ 0.69
LMO4-201ENST00000370542 TMPOP42166 694 aaKnown RBP19.37■□□□□ 0.69
LMO4-201ENST00000370542 LRP10Q7Z4F1 713 aa19.37■□□□□ 0.69
LMO4-201ENST00000370542 NUP98P52948 1817 aa19.37■□□□□ 0.69
LMO4-201ENST00000370542 RIPK4P57078 832 aa19.36■□□□□ 0.69
LMO4-201ENST00000370542 DPY19L2Q6NUT2 758 aa19.36■□□□□ 0.69
LMO4-201ENST00000370542 RIC1Q4ADV7 1423 aa19.35■□□□□ 0.69
LMO4-201ENST00000370542 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
LMO4-201ENST00000370542 NPHP1O15259 732 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms