RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
GTF2B-201ENST00000370500 ARXQ96QS3 562 aa12.56□□□□□ -0.4
GTF2B-201ENST00000370500 C5P01031 1676 aa12.55□□□□□ -0.4
GTF2B-201ENST00000370500 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
GTF2B-201ENST00000370500 PPP1R37O75864 691 aa12.55□□□□□ -0.4
GTF2B-201ENST00000370500 ITPK1Q13572 414 aa12.55□□□□□ -0.4
GTF2B-201ENST00000370500 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
GTF2B-201ENST00000370500 MAP3K5Q99683 1374 aa12.55□□□□□ -0.4
GTF2B-201ENST00000370500 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
GTF2B-201ENST00000370500 TEFQ10587 303 aa12.54□□□□□ -0.4
GTF2B-201ENST00000370500 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
GTF2B-201ENST00000370500 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
GTF2B-201ENST00000370500 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
GTF2B-201ENST00000370500 SCN11AQ9UI33 1791 aa12.53□□□□□ -0.4
GTF2B-201ENST00000370500 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
GTF2B-201ENST00000370500 MRC1P22897 1456 aa12.53□□□□□ -0.4
GTF2B-201ENST00000370500 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
GTF2B-201ENST00000370500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
GTF2B-201ENST00000370500 PTCD1O75127 700 aaKnown RBP12.53□□□□□ -0.4
GTF2B-201ENST00000370500 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
GTF2B-201ENST00000370500 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
GTF2B-201ENST00000370500 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
GTF2B-201ENST00000370500 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
GTF2B-201ENST00000370500 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.4
GTF2B-201ENST00000370500 GNPATO15228 680 aa12.52□□□□□ -0.41
GTF2B-201ENST00000370500 RPS6KA4O75676 772 aa12.52□□□□□ -0.41
GTF2B-201ENST00000370500 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
GTF2B-201ENST00000370500 ADAMTS7Q9UKP4 1686 aa12.51□□□□□ -0.41
GTF2B-201ENST00000370500 CEMIPQ8WUJ3 1361 aa12.51□□□□□ -0.41
GTF2B-201ENST00000370500 TTC5Q8N0Z6 440 aa12.51□□□□□ -0.41
GTF2B-201ENST00000370500 SYT17Q9BSW7 474 aa12.51□□□□□ -0.41
GTF2B-201ENST00000370500 TEX13AQ9BXU3 409 aaPredicted RBP12.51□□□□□ -0.41
GTF2B-201ENST00000370500 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
GTF2B-201ENST00000370500 FHDC1Q9C0D6 1143 aaPredicted RBP12.5□□□□□ -0.41
GTF2B-201ENST00000370500 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
GTF2B-201ENST00000370500 PHF14O94880 888 aa12.49□□□□□ -0.41
GTF2B-201ENST00000370500 ZNF790Q6PG37 636 aa12.49□□□□□ -0.41
GTF2B-201ENST00000370500 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
GTF2B-201ENST00000370500 PTCD2Q8WV60 388 aaKnown RBP12.49□□□□□ -0.41
GTF2B-201ENST00000370500 PLEKHF1Q96S99 279 aa12.49□□□□□ -0.41
GTF2B-201ENST00000370500 COL24A1Q17RW2 1714 aa12.49□□□□□ -0.41
GTF2B-201ENST00000370500 STARD3NLO95772 234 aa12.48□□□□□ -0.41
GTF2B-201ENST00000370500 RFC4P35249 363 aa12.48□□□□□ -0.41
GTF2B-201ENST00000370500 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
GTF2B-201ENST00000370500 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
GTF2B-201ENST00000370500 HS6ST3Q8IZP7 471 aa12.48□□□□□ -0.41
GTF2B-201ENST00000370500 PRKRIP1Q9H875 184 aaPredicted RBP12.48□□□□□ -0.41
GTF2B-201ENST00000370500 TUBGCP6Q96RT7 1819 aa12.48□□□□□ -0.41
GTF2B-201ENST00000370500 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
GTF2B-201ENST00000370500 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
GTF2B-201ENST00000370500 CYP19A1P11511 503 aaPredicted RBP12.47□□□□□ -0.41
GTF2B-201ENST00000370500 FOXK1P85037 733 aa12.47□□□□□ -0.41
GTF2B-201ENST00000370500 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
GTF2B-201ENST00000370500 ARHGEF1Q92888 912 aaKnown RBP12.47□□□□□ -0.41
GTF2B-201ENST00000370500 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
GTF2B-201ENST00000370500 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
GTF2B-201ENST00000370500 CICQ96RK0 1608 aaPredicted RBP12.47□□□□□ -0.41
GTF2B-201ENST00000370500 UBR3Q6ZT12 1888 aa12.47□□□□□ -0.41
GTF2B-201ENST00000370500 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
GTF2B-201ENST00000370500 INTS5Q6P9B9 1019 aaKnown RBP12.46□□□□□ -0.41
GTF2B-201ENST00000370500 DNAJC10Q8IXB1 793 aa12.46□□□□□ -0.41
GTF2B-201ENST00000370500 CD2APQ9Y5K6 639 aa12.46□□□□□ -0.41
GTF2B-201ENST00000370500 TBC1D12O60347 775 aa12.45□□□□□ -0.42
GTF2B-201ENST00000370500 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
GTF2B-201ENST00000370500 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
GTF2B-201ENST00000370500 ADGRD1Q6QNK2 874 aa12.45□□□□□ -0.42
GTF2B-201ENST00000370500 PLPP6Q8IY26 295 aa12.45□□□□□ -0.42
GTF2B-201ENST00000370500 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
GTF2B-201ENST00000370500 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
GTF2B-201ENST00000370500 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
GTF2B-201ENST00000370500 WDR43Q15061 677 aaKnown RBP eCLIP12.44□□□□□ -0.42
GTF2B-201ENST00000370500 MCM10Q7L590 875 aa12.44□□□□□ -0.42
GTF2B-201ENST00000370500 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
GTF2B-201ENST00000370500 KCPQ6ZWJ8 1503 aa12.44□□□□□ -0.42
GTF2B-201ENST00000370500 HEG1Q9ULI3 1381 aa12.44□□□□□ -0.42
GTF2B-201ENST00000370500 LMOD3Q0VAK6 560 aa12.43□□□□□ -0.42
GTF2B-201ENST00000370500 HCSTQ9UBK5 93 aa12.43□□□□□ -0.42
GTF2B-201ENST00000370500 A0A087WZG4 1122 aa12.43□□□□□ -0.42
GTF2B-201ENST00000370500 ZPR1O75312 459 aa12.43□□□□□ -0.42
GTF2B-201ENST00000370500 GYS1P13807 737 aa12.43□□□□□ -0.42
GTF2B-201ENST00000370500 SMIM5Q71RC9 77 aa12.43□□□□□ -0.42
GTF2B-201ENST00000370500 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
GTF2B-201ENST00000370500 USP42Q9H9J4 1324 aaKnown RBP12.42□□□□□ -0.42
GTF2B-201ENST00000370500 TK2O00142 265 aa12.42□□□□□ -0.42
GTF2B-201ENST00000370500 MMP10P09238 476 aa12.42□□□□□ -0.42
GTF2B-201ENST00000370500 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
GTF2B-201ENST00000370500 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
GTF2B-201ENST00000370500 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
GTF2B-201ENST00000370500 RUNDC1Q96C34 613 aa12.42□□□□□ -0.42
GTF2B-201ENST00000370500 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
GTF2B-201ENST00000370500 NARFQ9UHQ1 456 aa12.42□□□□□ -0.42
GTF2B-201ENST00000370500 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
GTF2B-201ENST00000370500 TJP1Q07157 1748 aa12.41□□□□□ -0.42
GTF2B-201ENST00000370500 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
GTF2B-201ENST00000370500 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
GTF2B-201ENST00000370500 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
GTF2B-201ENST00000370500 RIPK4P57078 832 aa12.41□□□□□ -0.42
GTF2B-201ENST00000370500 NPM2Q86SE8 214 aaKnown RBP12.41□□□□□ -0.42
GTF2B-201ENST00000370500 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
GTF2B-201ENST00000370500 PARP3Q9Y6F1 533 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms