RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 CCDC39Q9UFE4 941 aa13.1□□□□□ -0.31
TWNK-202ENST00000370228 RGS17Q9UGC6 210 aaPredicted RBP13.1□□□□□ -0.31
TWNK-202ENST00000370228 IGHDP01880 384 aa13.1□□□□□ -0.31
TWNK-202ENST00000370228 KIAA2012Q0VF49 1180 aa13.1□□□□□ -0.31
TWNK-202ENST00000370228 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
TWNK-202ENST00000370228 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
TWNK-202ENST00000370228 ZNF521Q96K83 1311 aa13.09□□□□□ -0.31
TWNK-202ENST00000370228 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
TWNK-202ENST00000370228 GPATCH11Q8N954 259 aa13.09□□□□□ -0.31
TWNK-202ENST00000370228 SLIT3O75094 1523 aa13.08□□□□□ -0.31
TWNK-202ENST00000370228 TTC36A6NLP5 189 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 RASSF4Q9H2L5 321 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 BCL9LQ86UU0 1499 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.32
TWNK-202ENST00000370228 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
TWNK-202ENST00000370228 PDE3AQ14432 1141 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 NBPF9Q3BBW0 867 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 LGR6Q9HBX8 967 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 CPDO75976 1380 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 PTF1AQ7RTS3 328 aa13.08□□□□□ -0.32
TWNK-202ENST00000370228 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
TWNK-202ENST00000370228 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
TWNK-202ENST00000370228 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
TWNK-202ENST00000370228 DNAJC21Q5F1R6 531 aaKnown RBP13.07□□□□□ -0.32
TWNK-202ENST00000370228 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
TWNK-202ENST00000370228 GJD4Q96KN9 370 aaPredicted RBP13.07□□□□□ -0.32
TWNK-202ENST00000370228 TBC1D32Q96NH3 1257 aa13.07□□□□□ -0.32
TWNK-202ENST00000370228 IL2RBP14784 551 aa13.06□□□□□ -0.32
TWNK-202ENST00000370228 KCNQ4P56696 695 aa13.06□□□□□ -0.32
TWNK-202ENST00000370228 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
TWNK-202ENST00000370228 DDX41Q9UJV9 622 aaKnown RBP13.06□□□□□ -0.32
TWNK-202ENST00000370228 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
TWNK-202ENST00000370228 CTNNA3Q9UI47 895 aa13.06□□□□□ -0.32
TWNK-202ENST00000370228 MORC2Q9Y6X9 1032 aaPredicted RBP13.06□□□□□ -0.32
TWNK-202ENST00000370228 COL3A1P02461 1466 aaPredicted RBP13.05□□□□□ -0.32
TWNK-202ENST00000370228 KIF1CO43896 1103 aaKnown RBP13.05□□□□□ -0.32
TWNK-202ENST00000370228 FCHSD2O94868 740 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
TWNK-202ENST00000370228 RUNDC1Q96C34 613 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 PLEKHF1Q96S99 279 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 MEGF6O75095 1541 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 CYP27B1O15528 508 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 TMPOP42166 694 aaKnown RBP13.05□□□□□ -0.32
TWNK-202ENST00000370228 DDB1Q16531 1140 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 RAD50Q92878 1312 aa13.05□□□□□ -0.32
TWNK-202ENST00000370228 CCDC189A1A4V9 331 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 TDO2P48775 406 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
TWNK-202ENST00000370228 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 TRPC5Q9UL62 973 aaPredicted RBP13.04□□□□□ -0.32
TWNK-202ENST00000370228 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 EXOC5O00471 708 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 KCNQ2O43526 872 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
TWNK-202ENST00000370228 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 BORCS6Q96GS4 357 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
TWNK-202ENST00000370228 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 ANAPC15P60006 121 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 SLC39A6Q13433 755 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 ZNF853P0CG23 659 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 DDIT3P35638 169 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 ZNF445P59923 1031 aa13.03□□□□□ -0.32
TWNK-202ENST00000370228 TRMT2AQ8IZ69 625 aaKnown RBP13.03□□□□□ -0.32
TWNK-202ENST00000370228 CRB1P82279 1406 aa13.02□□□□□ -0.32
TWNK-202ENST00000370228 GYS2P54840 703 aa13.02□□□□□ -0.32
TWNK-202ENST00000370228 RWDD1Q9H446 243 aaPredicted RBP13.02□□□□□ -0.32
TWNK-202ENST00000370228 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
TWNK-202ENST00000370228 CTIFO43310 598 aaKnown RBP13.02□□□□□ -0.33
TWNK-202ENST00000370228 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
TWNK-202ENST00000370228 MED4Q9NPJ6 270 aa13.02□□□□□ -0.33
TWNK-202ENST00000370228 SUFUQ9UMX1 484 aa13.02□□□□□ -0.33
TWNK-202ENST00000370228 RTL1A6NKG5 1358 aa13.02□□□□□ -0.33
TWNK-202ENST00000370228 RBSNQ9H1K0 784 aa13.02□□□□□ -0.33
TWNK-202ENST00000370228 RXRBP28702 533 aa13.01□□□□□ -0.33
TWNK-202ENST00000370228 VPS72Q15906 364 aa13.01□□□□□ -0.33
TWNK-202ENST00000370228 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
TWNK-202ENST00000370228 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
TWNK-202ENST00000370228 TNNT1P13805 278 aa13.01□□□□□ -0.33
TWNK-202ENST00000370228 CASQ1P31415 396 aa13.01□□□□□ -0.33
TWNK-202ENST00000370228 CXorf56Q9H5V9 222 aa13.01□□□□□ -0.33
TWNK-202ENST00000370228 SLIT2O94813 1529 aa13.01□□□□□ -0.33
TWNK-202ENST00000370228 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
TWNK-202ENST00000370228 OTUD6BQ8N6M0 293 aa13□□□□□ -0.33
TWNK-202ENST00000370228 MARCH10Q8NA82 808 aaPredicted RBP13□□□□□ -0.33
TWNK-202ENST00000370228 IL17REQ8NFR9 667 aa13□□□□□ -0.33
TWNK-202ENST00000370228 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
TWNK-202ENST00000370228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13□□□□□ -0.33
TWNK-202ENST00000370228 CRYBG1Q9Y4K1 1723 aa13□□□□□ -0.33
TWNK-202ENST00000370228 CALR3Q96L12 384 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms