RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SRCAPQ6ZRS2 3230 aa17.66■□□□□ 0.42
SSR4-202ENST00000370085 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
SSR4-202ENST00000370085 CT47B1P0C2W7 299 aaPredicted RBP17.66■□□□□ 0.42
SSR4-202ENST00000370085 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
SSR4-202ENST00000370085 FKBP8Q14318 412 aa17.66■□□□□ 0.42
SSR4-202ENST00000370085 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
SSR4-202ENST00000370085 VAMP4O75379 141 aa17.65■□□□□ 0.42
SSR4-202ENST00000370085 ANXA1P04083 346 aa17.65■□□□□ 0.42
SSR4-202ENST00000370085 PROSER3Q2NL68 480 aa17.65■□□□□ 0.42
SSR4-202ENST00000370085 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
SSR4-202ENST00000370085 XAGE3Q8WTP9 111 aa17.65■□□□□ 0.42
SSR4-202ENST00000370085 CDCA7LQ96GN5 454 aa17.65■□□□□ 0.42
SSR4-202ENST00000370085 SETDB2Q96T68 719 aa17.65■□□□□ 0.42
SSR4-202ENST00000370085 NPHP1O15259 732 aa17.64■□□□□ 0.41
SSR4-202ENST00000370085 HSP90AB3PQ58FF7 597 aa17.64■□□□□ 0.41
SSR4-202ENST00000370085 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
SSR4-202ENST00000370085 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
SSR4-202ENST00000370085 TTLL7Q6ZT98 887 aa17.63■□□□□ 0.41
SSR4-202ENST00000370085 TRMT2AQ8IZ69 625 aaKnown RBP17.63■□□□□ 0.41
SSR4-202ENST00000370085 ZBTB3Q9H5J0 574 aa17.63■□□□□ 0.41
SSR4-202ENST00000370085 CARMIL3Q8ND23 1372 aa17.63■□□□□ 0.41
SSR4-202ENST00000370085 TM4SF1P30408 202 aa17.62■□□□□ 0.41
SSR4-202ENST00000370085 NFIXQ14938 502 aa17.62■□□□□ 0.41
SSR4-202ENST00000370085 GIGYF2Q6Y7W6 1299 aaKnown RBP17.62■□□□□ 0.41
SSR4-202ENST00000370085 ANKRD13DQ6ZTN6 518 aa17.62■□□□□ 0.41
SSR4-202ENST00000370085 LRP10Q7Z4F1 713 aa17.62■□□□□ 0.41
SSR4-202ENST00000370085 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
SSR4-202ENST00000370085 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
SSR4-202ENST00000370085 BCL2L12Q9HB09 334 aa17.62■□□□□ 0.41
SSR4-202ENST00000370085 NUP98P52948 1817 aa17.61■□□□□ 0.41
SSR4-202ENST00000370085 TBC1D9BQ66K14 1250 aa17.61■□□□□ 0.41
SSR4-202ENST00000370085 RIC3Q7Z5B4 369 aa17.61■□□□□ 0.41
SSR4-202ENST00000370085 NIP7Q9Y221 180 aaKnown RBP eCLIP17.61■□□□□ 0.41
SSR4-202ENST00000370085 POLRMTO00411 1230 aaKnown RBP17.6■□□□□ 0.41
SSR4-202ENST00000370085 CD2APQ9Y5K6 639 aa17.6■□□□□ 0.41
SSR4-202ENST00000370085 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
SSR4-202ENST00000370085 TCERG1O14776 1098 aaKnown RBP17.59■□□□□ 0.41
SSR4-202ENST00000370085 SERPINB2P05120 415 aa17.59■□□□□ 0.41
SSR4-202ENST00000370085 HLFQ16534 295 aa17.59■□□□□ 0.41
SSR4-202ENST00000370085 PARP10Q53GL7 1025 aa17.59■□□□□ 0.41
SSR4-202ENST00000370085 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
SSR4-202ENST00000370085 PHAXQ9H814 394 aaKnown RBP17.59■□□□□ 0.41
SSR4-202ENST00000370085 GTF2E1P29083 439 aaPredicted RBP17.58■□□□□ 0.4
SSR4-202ENST00000370085 ST5P78524 1137 aa17.58■□□□□ 0.4
SSR4-202ENST00000370085 DDR1Q08345 913 aa17.58■□□□□ 0.4
SSR4-202ENST00000370085 FLIIQ13045 1269 aa17.58■□□□□ 0.4
SSR4-202ENST00000370085 ALDH1L2Q3SY69 923 aa17.58■□□□□ 0.4
SSR4-202ENST00000370085 TPTE2Q6XPS3 522 aa17.58■□□□□ 0.4
SSR4-202ENST00000370085 NBPF5PQ86XG9 351 aaPredicted RBP17.58■□□□□ 0.4
SSR4-202ENST00000370085 FHDC1Q9C0D6 1143 aaPredicted RBP17.58■□□□□ 0.4
SSR4-202ENST00000370085 NEXNQ0ZGT2 675 aa17.57■□□□□ 0.4
SSR4-202ENST00000370085 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
SSR4-202ENST00000370085 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
SSR4-202ENST00000370085 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
SSR4-202ENST00000370085 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
SSR4-202ENST00000370085 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
SSR4-202ENST00000370085 KSR2Q6VAB6 950 aa17.56■□□□□ 0.4
SSR4-202ENST00000370085 ANKRD36CQ5JPF3 1778 aa17.56■□□□□ 0.4
SSR4-202ENST00000370085 GPTP24298 496 aa17.55■□□□□ 0.4
SSR4-202ENST00000370085 ZNF34Q8IZ26 560 aa17.55■□□□□ 0.4
SSR4-202ENST00000370085 SYT17Q9BSW7 474 aa17.55■□□□□ 0.4
SSR4-202ENST00000370085 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
SSR4-202ENST00000370085 AFDNP55196 1824 aaKnown RBP17.55■□□□□ 0.4
SSR4-202ENST00000370085 ARFGEF2Q9Y6D5 1785 aa17.55■□□□□ 0.4
SSR4-202ENST00000370085 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
SSR4-202ENST00000370085 PI4KAP2A4QPH2 592 aa17.54■□□□□ 0.4
SSR4-202ENST00000370085 TGFB2P61812 414 aa17.54■□□□□ 0.4
SSR4-202ENST00000370085 PI4KAP1Q8N8J0 262 aa17.54■□□□□ 0.4
SSR4-202ENST00000370085 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
SSR4-202ENST00000370085 C10orf71Q711Q0 1435 aa17.54■□□□□ 0.4
SSR4-202ENST00000370085 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
SSR4-202ENST00000370085 NRXN2Q9P2S2 1712 aa17.53■□□□□ 0.4
SSR4-202ENST00000370085 YTHDC1Q96MU7 727 aaKnown RBP17.53■□□□□ 0.4
SSR4-202ENST00000370085 MAP3K2Q9Y2U5 619 aa17.53■□□□□ 0.4
SSR4-202ENST00000370085 PTPRCP08575 1304 aa17.52■□□□□ 0.4
SSR4-202ENST00000370085 KIF13BQ9NQT8 1826 aa17.52■□□□□ 0.4
SSR4-202ENST00000370085 FAM177BA6PVY3 158 aa17.52■□□□□ 0.4
SSR4-202ENST00000370085 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
SSR4-202ENST00000370085 PDE6BP35913 854 aa17.52■□□□□ 0.4
SSR4-202ENST00000370085 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.4
SSR4-202ENST00000370085 G2E3Q7L622 706 aa17.52■□□□□ 0.4
SSR4-202ENST00000370085 SSH1Q8WYL5 1049 aa17.52■□□□□ 0.4
SSR4-202ENST00000370085 METTL22Q9BUU2 404 aaPredicted RBP17.52■□□□□ 0.4
SSR4-202ENST00000370085 UTP14AQ9BVJ6 771 aaKnown RBP17.52■□□□□ 0.4
SSR4-202ENST00000370085 BRIP1Q9BX63 1249 aa17.52■□□□□ 0.4
SSR4-202ENST00000370085 TRIM28Q13263 835 aaKnown RBP17.51■□□□□ 0.39
SSR4-202ENST00000370085 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
SSR4-202ENST00000370085 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
SSR4-202ENST00000370085 MYD88Q99836 296 aa17.51■□□□□ 0.39
SSR4-202ENST00000370085 UBN2Q6ZU65 1347 aa17.5■□□□□ 0.39
SSR4-202ENST00000370085 KIF16BQ96L93 1317 aa17.5■□□□□ 0.39
SSR4-202ENST00000370085 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
SSR4-202ENST00000370085 CCDC191Q8NCU4 936 aa17.5■□□□□ 0.39
SSR4-202ENST00000370085 ISCA1Q9BUE6 129 aa17.5■□□□□ 0.39
SSR4-202ENST00000370085 TRMT112Q9UI30 125 aaKnown RBP17.5■□□□□ 0.39
SSR4-202ENST00000370085 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
SSR4-202ENST00000370085 RARSP54136 660 aaKnown RBP17.49■□□□□ 0.39
SSR4-202ENST00000370085 SUSD4Q5VX71 490 aa17.49■□□□□ 0.39
SSR4-202ENST00000370085 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
SSR4-202ENST00000370085 CWC25Q9NXE8 425 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms