RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 TAF7Q15545 349 aaPredicted RBP12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 ADCK5Q3MIX3 580 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 CCDC30Q5VVM6 783 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 AACSQ86V21 672 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 NGDNQ8NEJ9 315 aaKnown RBP12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 RTL1A6NKG5 1358 aa12.3□□□□□ -0.44
PRPF38B-201ENST00000370021 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
PRPF38B-201ENST00000370021 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
PRPF38B-201ENST00000370021 URI1O94763 535 aaPredicted RBP12.29□□□□□ -0.44
PRPF38B-201ENST00000370021 CACTINQ8WUQ7 758 aaKnown RBP12.29□□□□□ -0.44
PRPF38B-201ENST00000370021 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
PRPF38B-201ENST00000370021 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
PRPF38B-201ENST00000370021 PTPN21Q16825 1174 aa12.29□□□□□ -0.44
PRPF38B-201ENST00000370021 TIGD1Q96MW7 591 aa12.29□□□□□ -0.44
PRPF38B-201ENST00000370021 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 NOL10Q9BSC4 688 aaKnown RBP12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 ADGRB1O14514 1584 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 CCT2P78371 535 aaKnown RBP12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 RAB11FIP4Q86YS3 637 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 PHAXQ9H814 394 aaKnown RBP12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 FRMPD1Q5SYB0 1578 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 TEFQ10587 303 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 CUL4AQ13619 759 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 DNAJC2Q99543 621 aaKnown RBP12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 FEZ1Q99689 392 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 SIGLEC1Q9BZZ2 1709 aa12.28□□□□□ -0.44
PRPF38B-201ENST00000370021 CCDC69A6NI79 296 aa12.27□□□□□ -0.44
PRPF38B-201ENST00000370021 IL13P35225 146 aa12.27□□□□□ -0.44
PRPF38B-201ENST00000370021 ERCC6LQ2NKX8 1250 aa12.27□□□□□ -0.44
PRPF38B-201ENST00000370021 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.44
PRPF38B-201ENST00000370021 SYT10Q6XYQ8 523 aa12.27□□□□□ -0.44
PRPF38B-201ENST00000370021 UBXN4Q92575 508 aa12.27□□□□□ -0.44
PRPF38B-201ENST00000370021 ANAPC15P60006 121 aa12.27□□□□□ -0.45
PRPF38B-201ENST00000370021 PTH1RQ03431 593 aa12.27□□□□□ -0.45
PRPF38B-201ENST00000370021 TEX35Q5T0J7 233 aa12.27□□□□□ -0.45
PRPF38B-201ENST00000370021 NR1I2O75469 434 aa12.27□□□□□ -0.45
PRPF38B-201ENST00000370021 PDCP20941 246 aa12.27□□□□□ -0.45
PRPF38B-201ENST00000370021 NUDT16Q96DE0 195 aaKnown RBP12.27□□□□□ -0.45
PRPF38B-201ENST00000370021 NDUFB9Q9Y6M9 179 aa12.27□□□□□ -0.45
PRPF38B-201ENST00000370021 FANCAO15360 1455 aa12.27□□□□□ -0.45
PRPF38B-201ENST00000370021 USP27XA6NNY8 438 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 ATP8B2P98198 1209 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 ME3Q16798 604 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 TMC6Q7Z403 805 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 CCDC34Q96HJ3 373 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 MTMR6Q9Y217 621 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 IQSEC2Q5JU85 1478 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 NSD2O96028 1365 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 SBNO2Q9Y2G9 1366 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 ZNF75DP51815 510 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 G3BP1Q13283 466 aaKnown RBP eCLIP12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 PAXBP1Q9Y5B6 917 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 DNAI1Q9UI46 699 aa12.26□□□□□ -0.45
PRPF38B-201ENST00000370021 HSPA4P34932 840 aa12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 AOPEPQ8N6M6 819 aa12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 RBM8AQ9Y5S9 174 aaKnown RBP12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 MRVI1Q9Y6F6 885 aa12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 PTPRCP08575 1304 aa12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 ARHGEF28Q8N1W1 1705 aaKnown RBP12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 JAK2O60674 1132 aa12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 SNW1Q13573 536 aaKnown RBP12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 ARHGAP29Q52LW3 1261 aa12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 KIF1BPQ96EK5 621 aa12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 FAM227BQ96M60 508 aa12.25□□□□□ -0.45
PRPF38B-201ENST00000370021 PPP6R1Q9UPN7 881 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 PI4KAP2A4QPH2 592 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 CHST3Q7LGC8 479 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 CCAR1Q8IX12 1150 aaKnown RBP12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 PI4KAP1Q8N8J0 262 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 NEK11Q8NG66 645 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 FTOQ9C0B1 505 aaKnown RBP eCLIP12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 SGSM2O43147 1006 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 PSMA5P28066 241 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 CCDC144CPQ8IYA2 1237 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 ZNF397Q8NF99 534 aaPredicted RBP12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 ZSCAN31Q96LW9 406 aaPredicted RBP12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 ARGLU1Q9NWB6 273 aaPredicted RBP12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
PRPF38B-201ENST00000370021 NBPF7P0C2Y1 421 aaPredicted RBP12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 TPM4P67936 248 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 CYB5RLQ6IPT4 315 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 C10orf67Q8IYJ2 551 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 BRF1Q92994 677 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 SERPINC1P01008 464 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 ATP2B1P20020 1258 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 TAF3Q5VWG9 929 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 NEUROD6Q96NK8 337 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms