RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 CHGBP05060 677 aa13.08□□□□□ -0.32
LRIF1-201ENST00000369763 TFIP11Q9UBB9 837 aaKnown RBP13.08□□□□□ -0.32
LRIF1-201ENST00000369763 TAF6LQ9Y6J9 622 aa13.08□□□□□ -0.32
LRIF1-201ENST00000369763 RPAP1Q9BWH6 1393 aaPredicted RBP13.07□□□□□ -0.32
LRIF1-201ENST00000369763 MYL6BP14649 208 aa13.07□□□□□ -0.32
LRIF1-201ENST00000369763 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
LRIF1-201ENST00000369763 TLR7Q9NYK1 1049 aaKnown RBP13.07□□□□□ -0.32
LRIF1-201ENST00000369763 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
LRIF1-201ENST00000369763 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
LRIF1-201ENST00000369763 ESCO1Q5FWF5 840 aa13.07□□□□□ -0.32
LRIF1-201ENST00000369763 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
LRIF1-201ENST00000369763 SIRT1Q96EB6 747 aa13.07□□□□□ -0.32
LRIF1-201ENST00000369763 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
LRIF1-201ENST00000369763 CKAP2LQ8IYA6 745 aa13.07□□□□□ -0.32
LRIF1-201ENST00000369763 PRDM10Q9NQV6 1147 aa13.07□□□□□ -0.32
LRIF1-201ENST00000369763 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
LRIF1-201ENST00000369763 PHF14O94880 888 aa13.06□□□□□ -0.32
LRIF1-201ENST00000369763 F13A1P00488 732 aa13.06□□□□□ -0.32
LRIF1-201ENST00000369763 CEBPZQ03701 1054 aaKnown RBP13.06□□□□□ -0.32
LRIF1-201ENST00000369763 SLC39A6Q13433 755 aa13.06□□□□□ -0.32
LRIF1-201ENST00000369763 C3P01024 1663 aa13.06□□□□□ -0.32
LRIF1-201ENST00000369763 ME3Q16798 604 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 PDCL3Q9H2J4 239 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.05□□□□□ -0.32
LRIF1-201ENST00000369763 SPATA31D1Q6ZQQ2 1576 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 KDRP35968 1356 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 RAB11FIP3O75154 756 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 PSME1Q06323 249 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 TTC14Q96N46 770 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 HYPKQ9NX55 129 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 CYP46A1Q9Y6A2 500 aa13.05□□□□□ -0.32
LRIF1-201ENST00000369763 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.04□□□□□ -0.32
LRIF1-201ENST00000369763 GLRX3O76003 335 aaKnown RBP13.04□□□□□ -0.32
LRIF1-201ENST00000369763 HS1BP3Q53T59 392 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
LRIF1-201ENST00000369763 DDX11Q96FC9 970 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 LRRC2Q9BYS8 371 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 POLA2Q14181 598 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 NAP1L2Q9ULW6 460 aaPredicted RBP13.04□□□□□ -0.32
LRIF1-201ENST00000369763 RBM8AQ9Y5S9 174 aaKnown RBP13.04□□□□□ -0.32
LRIF1-201ENST00000369763 REREQ9P2R6 1566 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 TPCN1Q9ULQ1 816 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 TCHHQ07283 1943 aa13.04□□□□□ -0.32
LRIF1-201ENST00000369763 NMIQ13287 307 aaPredicted RBP13.03□□□□□ -0.32
LRIF1-201ENST00000369763 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 FBXW7Q969H0 707 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 SETD1AO15047 1707 aaKnown RBP13.03□□□□□ -0.32
LRIF1-201ENST00000369763 TECPR2O15040 1411 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 ZKSCAN1P17029 563 aaPredicted RBP13.03□□□□□ -0.32
LRIF1-201ENST00000369763 UBE2HP62256 183 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 ITSN1Q15811 1721 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 MON2Q7Z3U7 1717 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 AP5Z1O43299 807 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 EAF2Q96CJ1 260 aaPredicted RBP13.03□□□□□ -0.32
LRIF1-201ENST00000369763 BICC1Q9H694 974 aaKnown RBP13.03□□□□□ -0.32
LRIF1-201ENST00000369763 MTMR6Q9Y217 621 aa13.03□□□□□ -0.32
LRIF1-201ENST00000369763 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.32
LRIF1-201ENST00000369763 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
LRIF1-201ENST00000369763 GOLGA6L4A6NEF3 574 aa13.02□□□□□ -0.33
LRIF1-201ENST00000369763 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
LRIF1-201ENST00000369763 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
LRIF1-201ENST00000369763 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
LRIF1-201ENST00000369763 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.33
LRIF1-201ENST00000369763 SUCLG2Q96I99 432 aa13.02□□□□□ -0.33
LRIF1-201ENST00000369763 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 SLFNL1Q499Z3 407 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 LIG1P18858 919 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 CREB3L3Q68CJ9 461 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 LUZP1Q86V48 1076 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 DRC7Q8IY82 874 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 RUFY2Q8WXA3 655 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 SASS6Q6UVJ0 657 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
LRIF1-201ENST00000369763 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
LRIF1-201ENST00000369763 ADCY9O60503 1353 aa13□□□□□ -0.33
LRIF1-201ENST00000369763 A0A087WWV3 80 aa13□□□□□ -0.33
LRIF1-201ENST00000369763 GPATCH3Q96I76 525 aa13□□□□□ -0.33
LRIF1-201ENST00000369763 ZC3H6P61129 1189 aaKnown RBP13□□□□□ -0.33
LRIF1-201ENST00000369763 ZNF589Q86UQ0 364 aaPredicted RBP13□□□□□ -0.33
LRIF1-201ENST00000369763 DBF4Q9UBU7 674 aaPredicted RBP13□□□□□ -0.33
LRIF1-201ENST00000369763 SSH2Q76I76 1423 aa13□□□□□ -0.33
LRIF1-201ENST00000369763 SASH1O94885 1247 aa13□□□□□ -0.33
LRIF1-201ENST00000369763 FGD1P98174 961 aa13□□□□□ -0.33
LRIF1-201ENST00000369763 TTC6Q86TZ1 520 aa13□□□□□ -0.33
LRIF1-201ENST00000369763 JAK2O60674 1132 aa12.99□□□□□ -0.33
LRIF1-201ENST00000369763 KDM4AO75164 1064 aa12.99□□□□□ -0.33
LRIF1-201ENST00000369763 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
LRIF1-201ENST00000369763 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
LRIF1-201ENST00000369763 PYCARDQ9ULZ3 195 aa12.99□□□□□ -0.33
LRIF1-201ENST00000369763 ATP6V1DQ9Y5K8 247 aa12.99□□□□□ -0.33
LRIF1-201ENST00000369763 CCDC171Q6TFL3 1326 aa12.99□□□□□ -0.33
LRIF1-201ENST00000369763 LARP1Q6PKG0 1096 aaKnown RBP12.99□□□□□ -0.33
LRIF1-201ENST00000369763 SEC62Q99442 399 aaKnown RBP12.99□□□□□ -0.33
LRIF1-201ENST00000369763 PLEKHG1Q9ULL1 1385 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms