RNA–Protein interactions for RNA: ENST00000369600.5

PHTF1-203, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-203ENST00000369600 LRMPQ12912 555 aa17.09■□□□□ 0.33
PHTF1-203ENST00000369600 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
PHTF1-203ENST00000369600 LIG1P18858 919 aa17.09■□□□□ 0.33
PHTF1-203ENST00000369600 ME3Q16798 604 aa17.09■□□□□ 0.33
PHTF1-203ENST00000369600 CHPF2Q9P2E5 772 aa17.09■□□□□ 0.33
PHTF1-203ENST00000369600 U2AF2P26368 475 aaKnown RBP eCLIP17.08■□□□□ 0.33
PHTF1-203ENST00000369600 FOSBP53539 338 aa17.08■□□□□ 0.33
PHTF1-203ENST00000369600 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.33
PHTF1-203ENST00000369600 CDC37L1Q7L3B6 337 aa17.08■□□□□ 0.32
PHTF1-203ENST00000369600 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 TTC6Q86TZ1 520 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
PHTF1-203ENST00000369600 CLASRPQ8N2M8 674 aaKnown RBP17.07■□□□□ 0.32
PHTF1-203ENST00000369600 KIAA1524Q8TCG1 905 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 ZNF592Q92610 1267 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 TRIM5Q9C035 493 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 NUP62CLQ9H1M0 184 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 NRBP1Q9UHY1 535 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 GOLGA6L6A8MZA4 724 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 CEBPZQ03701 1054 aaKnown RBP17.07■□□□□ 0.32
PHTF1-203ENST00000369600 CCDC186Q7Z3E2 898 aa17.07■□□□□ 0.32
PHTF1-203ENST00000369600 FAM227BQ96M60 508 aa17.06■□□□□ 0.32
PHTF1-203ENST00000369600 DACT1Q9NYF0 836 aa17.06■□□□□ 0.32
PHTF1-203ENST00000369600 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
PHTF1-203ENST00000369600 MAP3K11Q16584 847 aa17.06■□□□□ 0.32
PHTF1-203ENST00000369600 SIL1Q9H173 461 aa17.06■□□□□ 0.32
PHTF1-203ENST00000369600 C9orf78Q9NZ63 289 aaPredicted RBP17.06■□□□□ 0.32
PHTF1-203ENST00000369600 KCNQ3O43525 872 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 FLT4P35916 1363 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 KRT85P78386 507 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 AACSQ86V21 672 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 RUFY2Q8WXA3 655 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 FUCA2Q9BTY2 467 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 CCDC8Q9H0W5 538 aaPredicted RBP17.05■□□□□ 0.32
PHTF1-203ENST00000369600 TPCN1Q9ULQ1 816 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 TSPOAP1O95153 1857 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 PPFIA3O75145 1194 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 GLRX3O76003 335 aaKnown RBP17.05■□□□□ 0.32
PHTF1-203ENST00000369600 TYRO3Q06418 890 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 BICD2Q8TD16 824 aa17.05■□□□□ 0.32
PHTF1-203ENST00000369600 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
PHTF1-203ENST00000369600 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 DNAAF4Q8WXU2 420 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 RBM8AQ9Y5S9 174 aaKnown RBP17.04■□□□□ 0.32
PHTF1-203ENST00000369600 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
PHTF1-203ENST00000369600 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 USP6P35125 1406 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 ZSCAN20P17040 1043 aaPredicted RBP17.04■□□□□ 0.32
PHTF1-203ENST00000369600 ST3GAL1Q11201 340 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
PHTF1-203ENST00000369600 NAA30Q147X3 362 aaPredicted RBP17.03■□□□□ 0.32
PHTF1-203ENST00000369600 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
PHTF1-203ENST00000369600 AOX1Q06278 1338 aa17.03■□□□□ 0.32
PHTF1-203ENST00000369600 HDGFP51858 240 aaKnown RBP17.03■□□□□ 0.32
PHTF1-203ENST00000369600 FAM200AQ8TCP9 573 aa17.03■□□□□ 0.32
PHTF1-203ENST00000369600 DDX11Q96FC9 970 aa17.03■□□□□ 0.32
PHTF1-203ENST00000369600 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
PHTF1-203ENST00000369600 C3P01024 1663 aa17.03■□□□□ 0.32
PHTF1-203ENST00000369600 SPATA32Q96LK8 384 aa17.02■□□□□ 0.32
PHTF1-203ENST00000369600 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.32
PHTF1-203ENST00000369600 TAF6LQ9Y6J9 622 aa17.02■□□□□ 0.32
PHTF1-203ENST00000369600 MON2Q7Z3U7 1717 aa17.02■□□□□ 0.32
PHTF1-203ENST00000369600 CWF19L2Q2TBE0 894 aaKnown RBP17.02■□□□□ 0.32
PHTF1-203ENST00000369600 DIP2BQ9P265 1576 aa17.02■□□□□ 0.31
PHTF1-203ENST00000369600 IGSF1Q8N6C5 1336 aa17.02■□□□□ 0.31
PHTF1-203ENST00000369600 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.31
PHTF1-203ENST00000369600 POLA2Q14181 598 aa17.02■□□□□ 0.31
PHTF1-203ENST00000369600 VPS53Q5VIR6 699 aa17.02■□□□□ 0.31
PHTF1-203ENST00000369600 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.31
PHTF1-203ENST00000369600 MRVI1Q9Y6F6 885 aa17.02■□□□□ 0.31
PHTF1-203ENST00000369600 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
PHTF1-203ENST00000369600 DNAJC25Q9H1X3 360 aa17.01■□□□□ 0.31
PHTF1-203ENST00000369600 A0A087WWV3 80 aa17.01■□□□□ 0.31
PHTF1-203ENST00000369600 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-203ENST00000369600 LARP1Q6PKG0 1096 aaKnown RBP17.01■□□□□ 0.31
PHTF1-203ENST00000369600 CBX8Q9HC52 389 aa17.01■□□□□ 0.31
PHTF1-203ENST00000369600 SBNO1A3KN83 1393 aa17.01■□□□□ 0.31
PHTF1-203ENST00000369600 PLEKHG3A1L390 1219 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
PHTF1-203ENST00000369600 DMTNQ08495 405 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 ABTB2Q8N961 1025 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 GPATCH3Q96I76 525 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 ZSCAN31Q96LW9 406 aaPredicted RBP17■□□□□ 0.31
PHTF1-203ENST00000369600 FSD1Q9BTV5 496 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
PHTF1-203ENST00000369600 MAP3K5Q99683 1374 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 CCDC171Q6TFL3 1326 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 KLHDC4Q8TBB5 520 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
PHTF1-203ENST00000369600 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
PHTF1-203ENST00000369600 A0A0U1RQG5 324 aaPredicted RBP16.99■□□□□ 0.31
PHTF1-203ENST00000369600 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
PHTF1-203ENST00000369600 BLOC1S2Q6QNY1 142 aa16.99■□□□□ 0.31
PHTF1-203ENST00000369600 NAP1L2Q9ULW6 460 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms