RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 CKAP4Q07065 602 aaKnown RBP12.36□□□□□ -0.43
RPRD2-202ENST00000369068 TUBBP07437 444 aa12.35□□□□□ -0.43
RPRD2-202ENST00000369068 CETN2P41208 172 aa12.35□□□□□ -0.43
RPRD2-202ENST00000369068 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
RPRD2-202ENST00000369068 EBAG9O00559 213 aa12.35□□□□□ -0.43
RPRD2-202ENST00000369068 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
RPRD2-202ENST00000369068 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
RPRD2-202ENST00000369068 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
RPRD2-202ENST00000369068 TTC31Q49AM3 519 aaPredicted RBP12.35□□□□□ -0.43
RPRD2-202ENST00000369068 CCDC178Q5BJE1 867 aa12.35□□□□□ -0.43
RPRD2-202ENST00000369068 HMG20BQ9P0W2 317 aa12.35□□□□□ -0.43
RPRD2-202ENST00000369068 MRC2Q9UBG0 1479 aa12.35□□□□□ -0.43
RPRD2-202ENST00000369068 HSF2BPO75031 334 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 GABPB1Q06547 395 aaPredicted RBP12.34□□□□□ -0.43
RPRD2-202ENST00000369068 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 MAATS1Q7Z4T9 603 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 CEP112Q8N8E3 955 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 GOLGA1Q92805 767 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 F13A1P00488 732 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 TYRO3Q06418 890 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 TDRD12Q587J7 1177 aaKnown RBP12.34□□□□□ -0.43
RPRD2-202ENST00000369068 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
RPRD2-202ENST00000369068 JADE2Q9NQC1 790 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 PPP1R12BO60237 982 aaPredicted RBP12.34□□□□□ -0.43
RPRD2-202ENST00000369068 LIG1P18858 919 aa12.34□□□□□ -0.43
RPRD2-202ENST00000369068 F6X3S4 739 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 MYL6BP14649 208 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 PTGS1P23219 599 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 DNAJC25Q9H1X3 360 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 IDH1O75874 414 aaKnown RBP12.33□□□□□ -0.44
RPRD2-202ENST00000369068 CCT2P78371 535 aaKnown RBP12.33□□□□□ -0.44
RPRD2-202ENST00000369068 MCM10Q7L590 875 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 NPHP3Q7Z494 1330 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 RPRD2Q5VT52 1461 aaKnown RBP12.33□□□□□ -0.44
RPRD2-202ENST00000369068 C10orf67Q8IYJ2 551 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 TSG101Q99816 390 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 TAOK3Q9H2K8 898 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 BTBD11A6QL63 1104 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 RTEL1-TNFRSF6BF6WH68 1400 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 OPA1O60313 960 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 TATP17735 454 aaPredicted RBP12.33□□□□□ -0.44
RPRD2-202ENST00000369068 DNA2P51530 1060 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 ERO1AQ96HE7 468 aa12.33□□□□□ -0.44
RPRD2-202ENST00000369068 INTS4Q96HW7 963 aaKnown RBP12.33□□□□□ -0.44
RPRD2-202ENST00000369068 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
RPRD2-202ENST00000369068 NEK1Q96PY6 1258 aa12.32□□□□□ -0.44
RPRD2-202ENST00000369068 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
RPRD2-202ENST00000369068 SYT1P21579 422 aa12.32□□□□□ -0.44
RPRD2-202ENST00000369068 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
RPRD2-202ENST00000369068 N4BP3O15049 544 aa12.32□□□□□ -0.44
RPRD2-202ENST00000369068 PIP4K2BP78356 416 aa12.32□□□□□ -0.44
RPRD2-202ENST00000369068 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
RPRD2-202ENST00000369068 MIS18AQ9NYP9 233 aa12.32□□□□□ -0.44
RPRD2-202ENST00000369068 DNM1Q05193 864 aaKnown RBP12.31□□□□□ -0.44
RPRD2-202ENST00000369068 KCNG4Q8TDN1 519 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 MRPS27Q92552 414 aaKnown RBP12.31□□□□□ -0.44
RPRD2-202ENST00000369068 ESYT1Q9BSJ8 1104 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
RPRD2-202ENST00000369068 CUL7Q14999 1698 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 SYKP43405 635 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 MTIF2P46199 727 aaKnown RBP12.31□□□□□ -0.44
RPRD2-202ENST00000369068 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
RPRD2-202ENST00000369068 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
RPRD2-202ENST00000369068 NBPF11Q86T75 865 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 TXNDC2Q86VQ3 553 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
RPRD2-202ENST00000369068 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 AKAP2Q9Y2D5 859 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 SEC24BO95487 1268 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
RPRD2-202ENST00000369068 AOPEPQ8N6M6 819 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 USP16Q9Y5T5 823 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 ZNF213O14771 459 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 PDE1AP54750 535 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 OTUD6BQ8N6M0 293 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 ATRIPQ8WXE1 791 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
RPRD2-202ENST00000369068 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.31□□□□□ -0.443e-6■■□□□ 11.4
RPRD2-202ENST00000369068 ZNF445P59923 1031 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 EPRSP07814 1512 aaKnown RBP12.3□□□□□ -0.44
RPRD2-202ENST00000369068 FAM177BA6PVY3 158 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
RPRD2-202ENST00000369068 MATR3P43243 847 aaKnown RBP eCLIP12.3□□□□□ -0.44
RPRD2-202ENST00000369068 SPAG1Q07617 926 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
RPRD2-202ENST00000369068 VPS18Q9P253 973 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 SLC12A7Q9Y666 1083 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 FLIIQ13045 1269 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 NSD2O96028 1365 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 A0A1B0GUL7 405 aa12.3□□□□□ -0.44
RPRD2-202ENST00000369068 CTAGE9A4FU28 777 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms