RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CEP85Q6P2H3 762 aa29.98■■■□□ 2.39
SNX3-203ENST00000368979 TTLL7Q6ZT98 887 aa29.98■■■□□ 2.39
SNX3-203ENST00000368979 KRT27Q7Z3Y8 459 aa29.98■■■□□ 2.39
SNX3-203ENST00000368979 RPAP2Q8IXW5 612 aaPredicted RBP29.98■■■□□ 2.39
SNX3-203ENST00000368979 ANKRD44Q8N8A2 993 aa29.98■■■□□ 2.39
SNX3-203ENST00000368979 ITPK1Q13572 414 aa29.97■■■□□ 2.39
SNX3-203ENST00000368979 ZBTB1Q9Y2K1 713 aa29.97■■■□□ 2.39
SNX3-203ENST00000368979 LY75O60449 1722 aa29.97■■■□□ 2.39
SNX3-203ENST00000368979 IGKV5-2P06315 115 aa29.96■■■□□ 2.39
SNX3-203ENST00000368979 NEXNQ0ZGT2 675 aa29.96■■■□□ 2.39
SNX3-203ENST00000368979 CWF19L2Q2TBE0 894 aaKnown RBP29.96■■■□□ 2.39
SNX3-203ENST00000368979 UBTFL1P0CB47 393 aaPredicted RBP29.96■■■□□ 2.39
SNX3-203ENST00000368979 SMC5Q8IY18 1101 aa29.96■■■□□ 2.39
SNX3-203ENST00000368979 MYD88Q99836 296 aa29.95■■■□□ 2.38
SNX3-203ENST00000368979 AFDNP55196 1824 aaKnown RBP29.94■■■□□ 2.38
SNX3-203ENST00000368979 NEURL1BA8MQ27 555 aa29.93■■■□□ 2.38
SNX3-203ENST00000368979 FAM196AQ6ZSG2 479 aa29.93■■■□□ 2.38
SNX3-203ENST00000368979 NBPF7P0C2Y1 421 aaPredicted RBP29.92■■■□□ 2.38
SNX3-203ENST00000368979 IL6STP40189 918 aaPredicted RBP29.92■■■□□ 2.38
SNX3-203ENST00000368979 INTS5Q6P9B9 1019 aaKnown RBP29.92■■■□□ 2.38
SNX3-203ENST00000368979 BCL11BQ9C0K0 894 aaPredicted RBP29.92■■■□□ 2.38
SNX3-203ENST00000368979 CCDC87Q9NVE4 849 aa29.92■■■□□ 2.38
SNX3-203ENST00000368979 UTYO14607 1347 aa29.92■■■□□ 2.38
SNX3-203ENST00000368979 CRKLP46109 303 aaKnown RBP29.91■■■□□ 2.38
SNX3-203ENST00000368979 POTEAQ6S8J7 498 aa29.91■■■□□ 2.38
SNX3-203ENST00000368979 LRRFIP2Q9Y608 721 aaKnown RBP29.91■■■□□ 2.38
SNX3-203ENST00000368979 RXRBP28702 533 aa29.91■■■□□ 2.38
SNX3-203ENST00000368979 SKAP1Q86WV1 359 aa29.9■■■□□ 2.38
SNX3-203ENST00000368979 ZBTB3Q9H5J0 574 aa29.9■■■□□ 2.38
SNX3-203ENST00000368979 ZNF330Q9Y3S2 320 aaPredicted RBP29.9■■■□□ 2.38
SNX3-203ENST00000368979 GRM8O00222 908 aa29.89■■■□□ 2.38
SNX3-203ENST00000368979 GCC1Q96CN9 775 aa29.89■■■□□ 2.38
SNX3-203ENST00000368979 C9orf78Q9NZ63 289 aaPredicted RBP29.89■■■□□ 2.38
SNX3-203ENST00000368979 MYH14Q7Z406 1995 aaKnown RBP29.89■■■□□ 2.37
SNX3-203ENST00000368979 GCKRQ14397 625 aa29.88■■■□□ 2.37
SNX3-203ENST00000368979 KIF6Q6ZMV9 814 aa29.88■■■□□ 2.37
SNX3-203ENST00000368979 PDZRN3Q9UPQ7 1066 aa29.88■■■□□ 2.37
SNX3-203ENST00000368979 EIF5P55010 431 aaKnown RBP29.87■■■□□ 2.37
SNX3-203ENST00000368979 MAP3K15Q6ZN16 1313 aa29.87■■■□□ 2.37
SNX3-203ENST00000368979 LINC00116Q8NCU8 138 aa29.86■■■□□ 2.37
SNX3-203ENST00000368979 HMMRO75330 724 aa29.86■■■□□ 2.37
SNX3-203ENST00000368979 ATP8B2P98198 1209 aa29.86■■■□□ 2.37
SNX3-203ENST00000368979 ATP5J2-PTCD1G3V325 749 aa29.85■■■□□ 2.37
SNX3-203ENST00000368979 CNTNAP4Q9C0A0 1308 aa29.85■■■□□ 2.37
SNX3-203ENST00000368979 DCTPP1Q9H773 170 aa29.85■■■□□ 2.37
SNX3-203ENST00000368979 HDAC5Q9UQL6 1122 aa29.85■■■□□ 2.37
SNX3-203ENST00000368979 TAF1LQ8IZX4 1826 aa29.84■■■□□ 2.37
SNX3-203ENST00000368979 ANKRD36CQ5JPF3 1778 aa29.84■■■□□ 2.37
SNX3-203ENST00000368979 ISCA1Q9BUE6 129 aa29.82■■■□□ 2.36
SNX3-203ENST00000368979 CCNL1Q9UK58 526 aaPredicted RBP29.82■■■□□ 2.36
SNX3-203ENST00000368979 PNMA6EA0A0J9YXQ4 647 aa29.81■■■□□ 2.36
SNX3-203ENST00000368979 TCIRG1Q13488 830 aa29.81■■■□□ 2.36
SNX3-203ENST00000368979 GIGYF2Q6Y7W6 1299 aaKnown RBP29.81■■■□□ 2.36
SNX3-203ENST00000368979 DZIP3Q86Y13 1208 aaKnown RBP29.81■■■□□ 2.36
SNX3-203ENST00000368979 ERVV-1B6SEH8 477 aa29.81■■■□□ 2.36
SNX3-203ENST00000368979 KCNQ4P56696 695 aa29.81■■■□□ 2.36
SNX3-203ENST00000368979 NUCB1Q02818 461 aa29.81■■■□□ 2.36
SNX3-203ENST00000368979 SUCLG2Q96I99 432 aa29.81■■■□□ 2.36
SNX3-203ENST00000368979 COL15A1P39059 1388 aa29.8■■■□□ 2.36
SNX3-203ENST00000368979 MTX1Q13505 466 aa29.8■■■□□ 2.36
SNX3-203ENST00000368979 NPM2Q86SE8 214 aaKnown RBP29.8■■■□□ 2.36
SNX3-203ENST00000368979 CCDC191Q8NCU4 936 aa29.8■■■□□ 2.36
SNX3-203ENST00000368979 TRIM28Q13263 835 aaKnown RBP29.79■■■□□ 2.36
SNX3-203ENST00000368979 RC3H1Q5TC82 1133 aaKnown RBP29.79■■■□□ 2.36
SNX3-203ENST00000368979 SSH3Q8TE77 659 aa29.79■■■□□ 2.36
SNX3-203ENST00000368979 KAZALD1Q96I82 304 aa29.79■■■□□ 2.36
SNX3-203ENST00000368979 CWC25Q9NXE8 425 aaPredicted RBP29.79■■■□□ 2.36
SNX3-203ENST00000368979 NUP98P52948 1817 aa29.78■■■□□ 2.36
SNX3-203ENST00000368979 BCORQ6W2J9 1755 aa29.78■■■□□ 2.36
SNX3-203ENST00000368979 TRIM37O94972 964 aa29.78■■■□□ 2.36
SNX3-203ENST00000368979 POLA2Q14181 598 aa29.78■■■□□ 2.36
SNX3-203ENST00000368979 HLFQ16534 295 aa29.78■■■□□ 2.36
SNX3-203ENST00000368979 RGS3P49796 1198 aa29.77■■■□□ 2.36
SNX3-203ENST00000368979 CASP7P55210 303 aa29.77■■■□□ 2.36
SNX3-203ENST00000368979 HSP90AB3PQ58FF7 597 aa29.77■■■□□ 2.36
SNX3-203ENST00000368979 PPP1R42Q7Z4L9 355 aa29.77■■■□□ 2.36
SNX3-203ENST00000368979 C4BP0C0L5 1744 aa29.77■■■□□ 2.36
SNX3-203ENST00000368979 A0A087WZG4 1122 aa29.76■■■□□ 2.36
SNX3-203ENST00000368979 ARXQ96QS3 562 aa29.76■■■□□ 2.36
SNX3-203ENST00000368979 TBC1D2BQ9UPU7 963 aa29.76■■■□□ 2.36
SNX3-203ENST00000368979 H7C1W4 665 aa29.76■■■□□ 2.35
SNX3-203ENST00000368979 CHD1LQ86WJ1 897 aa29.76■■■□□ 2.35
SNX3-203ENST00000368979 UBE3BQ7Z3V4 1068 aa29.75■■■□□ 2.35
SNX3-203ENST00000368979 ANKRD45Q5TZF3 282 aa29.74■■■□□ 2.35
SNX3-203ENST00000368979 SRGAP3O43295 1099 aa29.73■■■□□ 2.35
SNX3-203ENST00000368979 CAMTA2O94983 1202 aa29.73■■■□□ 2.35
SNX3-203ENST00000368979 PDE4AP27815 886 aa29.73■■■□□ 2.35
SNX3-203ENST00000368979 BICC1Q9H694 974 aaKnown RBP29.73■■■□□ 2.35
SNX3-203ENST00000368979 SCN7AQ01118 1682 aa29.72■■■□□ 2.35
SNX3-203ENST00000368979 LNPKQ9C0E8 428 aa29.71■■■□□ 2.35
SNX3-203ENST00000368979 RPS6KA4O75676 772 aa29.71■■■□□ 2.35
SNX3-203ENST00000368979 JARID2Q92833 1246 aaPredicted RBP29.71■■■□□ 2.35
SNX3-203ENST00000368979 EPHA10Q5JZY3 1008 aa29.7■■■□□ 2.34
SNX3-203ENST00000368979 SLC27A3Q5K4L6 730 aa29.7■■■□□ 2.34
SNX3-203ENST00000368979 LRRC4BQ9NT99 713 aa29.7■■■□□ 2.34
SNX3-203ENST00000368979 RABL6Q3YEC7 729 aaPredicted RBP29.69■■■□□ 2.34
SNX3-203ENST00000368979 NLRP10Q86W26 655 aa29.69■■■□□ 2.34
SNX3-203ENST00000368979 ZNF34Q8IZ26 560 aa29.69■■■□□ 2.34
SNX3-203ENST00000368979 TNS1Q9HBL0 1735 aaKnown RBP29.69■■■□□ 2.34
SNX3-203ENST00000368979 EXOC6BQ9Y2D4 811 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms