RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 USP16Q9Y5T5 823 aa11.52□□□□□ -0.57
SCNM1-201ENST00000368902 COL11A2P13942 1736 aaPredicted RBP11.52□□□□□ -0.57
SCNM1-201ENST00000368902 A0A087WZG4 1122 aa11.51□□□□□ -0.57
SCNM1-201ENST00000368902 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
SCNM1-201ENST00000368902 NFIXQ14938 502 aa11.51□□□□□ -0.57
SCNM1-201ENST00000368902 CCDC184Q52MB2 194 aa11.51□□□□□ -0.57
SCNM1-201ENST00000368902 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
SCNM1-201ENST00000368902 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
SCNM1-201ENST00000368902 IL6STP40189 918 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-201ENST00000368902 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
SCNM1-201ENST00000368902 TSPYL4Q9UJ04 414 aa11.5□□□□□ -0.57
SCNM1-201ENST00000368902 PDZRN3Q9UPQ7 1066 aa11.5□□□□□ -0.57
SCNM1-201ENST00000368902 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-201ENST00000368902 CCDC88AQ3V6T2 1871 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 GLTPD2A6NH11 291 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 NFKBIEO00221 500 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 APAF1O14727 1248 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 HSPA1AP0DMV8 641 aaKnown RBP11.49□□□□□ -0.57
SCNM1-201ENST00000368902 HSPA1BP0DMV9 641 aaKnown RBP11.49□□□□□ -0.57
SCNM1-201ENST00000368902 PRELPP51888 382 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 C2CD5Q86YS7 1000 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 TTLL6Q8N841 843 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 MRS2Q9HD23 443 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 BABAM1Q9NWV8 329 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 TRIM35Q9UPQ4 493 aa11.49□□□□□ -0.57
SCNM1-201ENST00000368902 SERPINB2P05120 415 aa11.48□□□□□ -0.57
SCNM1-201ENST00000368902 VEGFAP15692 232 aaPredicted RBP11.48□□□□□ -0.57
SCNM1-201ENST00000368902 BCL2L12Q9HB09 334 aa11.48□□□□□ -0.57
SCNM1-201ENST00000368902 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
SCNM1-201ENST00000368902 ANKRD31Q8N7Z5 1873 aa11.48□□□□□ -0.57
SCNM1-201ENST00000368902 H0YIN7 160 aa11.47□□□□□ -0.57
SCNM1-201ENST00000368902 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
SCNM1-201ENST00000368902 LAS1LQ9Y4W2 734 aaKnown RBP11.47□□□□□ -0.57
SCNM1-201ENST00000368902 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
SCNM1-201ENST00000368902 SIPA1L3O60292 1781 aaPredicted RBP11.46□□□□□ -0.57
SCNM1-201ENST00000368902 CHL1O00533 1208 aa11.46□□□□□ -0.57
SCNM1-201ENST00000368902 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.57
SCNM1-201ENST00000368902 NBPF26B4DH59 902 aa11.45□□□□□ -0.58
SCNM1-201ENST00000368902 NBPF10Q6P3W6 841 aaKnown RBP11.45□□□□□ -0.58
SCNM1-201ENST00000368902 DZIP3Q86Y13 1208 aaKnown RBP11.45□□□□□ -0.58
SCNM1-201ENST00000368902 NBPF15Q8N660 670 aa11.45□□□□□ -0.58
SCNM1-201ENST00000368902 BRIP1Q9BX63 1249 aa11.45□□□□□ -0.58
SCNM1-201ENST00000368902 FER1L6Q2WGJ9 1857 aa11.44□□□□□ -0.58
SCNM1-201ENST00000368902 BCORQ6W2J9 1755 aa11.44□□□□□ -0.58
SCNM1-201ENST00000368902 CAMTA2O94983 1202 aa11.44□□□□□ -0.58
SCNM1-201ENST00000368902 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
SCNM1-201ENST00000368902 PDE6BP35913 854 aa11.44□□□□□ -0.58
SCNM1-201ENST00000368902 DPY19L2Q6NUT2 758 aa11.44□□□□□ -0.58
SCNM1-201ENST00000368902 TAOK3Q9H2K8 898 aa11.44□□□□□ -0.58
SCNM1-201ENST00000368902 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
SCNM1-201ENST00000368902 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
SCNM1-201ENST00000368902 ERFEQ4G0M1 354 aa11.43□□□□□ -0.58
SCNM1-201ENST00000368902 TBC1D9BQ66K14 1250 aa11.43□□□□□ -0.58
SCNM1-201ENST00000368902 NGEFQ8N5V2 710 aa11.43□□□□□ -0.58
SCNM1-201ENST00000368902 ZNF622Q969S3 477 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCNM1-201ENST00000368902 CFAP44Q96MT7 982 aa11.43□□□□□ -0.58
SCNM1-201ENST00000368902 ZNF219Q9P2Y4 722 aaPredicted RBP11.43□□□□□ -0.58
SCNM1-201ENST00000368902 CACNA1SQ13698 1873 aa11.42□□□□□ -0.58
SCNM1-201ENST00000368902 LTBP3Q9NS15 1303 aa11.42□□□□□ -0.58
SCNM1-201ENST00000368902 POTECB2RU33 542 aa11.42□□□□□ -0.58
SCNM1-201ENST00000368902 C21orf2O43822 256 aa11.42□□□□□ -0.58
SCNM1-201ENST00000368902 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
SCNM1-201ENST00000368902 PRR5LQ6MZQ0 368 aa11.42□□□□□ -0.58
SCNM1-201ENST00000368902 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
SCNM1-201ENST00000368902 CNBD1Q8NA66 436 aa11.42□□□□□ -0.58
SCNM1-201ENST00000368902 SETDB2Q96T68 719 aa11.42□□□□□ -0.58
SCNM1-201ENST00000368902 NPHP1O15259 732 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 MYL6BP14649 208 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 SOGA3Q5TF21 947 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 CCDC24Q8N4L8 307 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 CNKSR1Q969H4 720 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 CREBZFQ9NS37 354 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 IFT57Q9NWB7 429 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
SCNM1-201ENST00000368902 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
SCNM1-201ENST00000368902 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 RGL2O15211 777 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 ZNF853P0CG23 659 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 GNAI1P63096 354 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 ST5P78524 1137 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 KRT24Q2M2I5 525 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 STYK1Q6J9G0 422 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
SCNM1-201ENST00000368902 FAM9BQ8IZU0 186 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 NECTIN2Q92692 538 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 MBIPQ9NS73 344 aa11.4□□□□□ -0.58
SCNM1-201ENST00000368902 CNTNAP1P78357 1384 aa11.4□□□□□ -0.59
SCNM1-201ENST00000368902 ERVV-1B6SEH8 477 aa11.39□□□□□ -0.59
SCNM1-201ENST00000368902 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
SCNM1-201ENST00000368902 HLFQ16534 295 aa11.39□□□□□ -0.59
SCNM1-201ENST00000368902 CCDC27Q2M243 656 aa11.39□□□□□ -0.59
SCNM1-201ENST00000368902 DUSP27Q5VZP5 1158 aa11.39□□□□□ -0.59
SCNM1-201ENST00000368902 KIF6Q6ZMV9 814 aa11.39□□□□□ -0.59
SCNM1-201ENST00000368902 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
SCNM1-201ENST00000368902 SLX4Q8IY92 1834 aa11.39□□□□□ -0.59
SCNM1-201ENST00000368902 IQCA1LA6NCM1 817 aa11.38□□□□□ -0.59
SCNM1-201ENST00000368902 HOXB7P09629 217 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms