RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 LINC00116Q8NCU8 138 aa15.53■□□□□ 0.08
TUBE1-202ENST00000368662 ZBTB40Q9NUA8 1239 aa15.53■□□□□ 0.08
TUBE1-202ENST00000368662 ZNF330Q9Y3S2 320 aaPredicted RBP15.53■□□□□ 0.08
TUBE1-202ENST00000368662 ALDH1L1O75891 902 aa15.52■□□□□ 0.08
TUBE1-202ENST00000368662 EIF5P55010 431 aaKnown RBP15.52■□□□□ 0.08
TUBE1-202ENST00000368662 LINS1Q8NG48 757 aa15.52■□□□□ 0.08
TUBE1-202ENST00000368662 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.08
TUBE1-202ENST00000368662 METTL22Q9BUU2 404 aaPredicted RBP15.52■□□□□ 0.08
TUBE1-202ENST00000368662 APBA3O96018 575 aa15.52■□□□□ 0.07
TUBE1-202ENST00000368662 TTLL7Q6ZT98 887 aa15.51■□□□□ 0.07
TUBE1-202ENST00000368662 A0A087WZG4 1122 aa15.5■□□□□ 0.07
TUBE1-202ENST00000368662 GNAI3P08754 354 aa15.5■□□□□ 0.07
TUBE1-202ENST00000368662 MAP3K15Q6ZN16 1313 aa15.5■□□□□ 0.07
TUBE1-202ENST00000368662 MYH14Q7Z406 1995 aaKnown RBP15.49■□□□□ 0.07
TUBE1-202ENST00000368662 ERVV-1B6SEH8 477 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 TXNRD1Q16881 649 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 DZIP3Q86Y13 1208 aaKnown RBP15.49■□□□□ 0.07
TUBE1-202ENST00000368662 HDAC5Q9UQL6 1122 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 ARFGEF2Q9Y6D5 1785 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 COL15A1P39059 1388 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 TAF1LQ8IZX4 1826 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 KCNQ4P56696 695 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 ARXQ96QS3 562 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 MYD88Q99836 296 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 ZBTB3Q9H5J0 574 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 RGPD3A6NKT7 1758 aaPredicted RBP15.49■□□□□ 0.07
TUBE1-202ENST00000368662 RGPD4Q7Z3J3 1758 aa15.49■□□□□ 0.07
TUBE1-202ENST00000368662 TNS1Q9HBL0 1735 aaKnown RBP15.48■□□□□ 0.07
TUBE1-202ENST00000368662 RPS6KA4O75676 772 aa15.48■□□□□ 0.07
TUBE1-202ENST00000368662 LRRC4BQ9NT99 713 aa15.48■□□□□ 0.07
TUBE1-202ENST00000368662 NUP188Q5SRE5 1749 aa15.48■□□□□ 0.07
TUBE1-202ENST00000368662 GIGYF2Q6Y7W6 1299 aaKnown RBP15.47■□□□□ 0.07
TUBE1-202ENST00000368662 AK7Q96M32 723 aa15.47■□□□□ 0.07
TUBE1-202ENST00000368662 MEIS3Q99687 375 aa15.47■□□□□ 0.07
TUBE1-202ENST00000368662 RTCBQ9Y3I0 505 aaKnown RBP15.47■□□□□ 0.07
TUBE1-202ENST00000368662 C4BP0C0L5 1744 aa15.47■□□□□ 0.07
TUBE1-202ENST00000368662 NEURL1BA8MQ27 555 aa15.47■□□□□ 0.07
TUBE1-202ENST00000368662 RGL2O15211 777 aa15.47■□□□□ 0.07
TUBE1-202ENST00000368662 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
TUBE1-202ENST00000368662 USP44Q9H0E7 712 aa15.47■□□□□ 0.07
TUBE1-202ENST00000368662 GNPATO15228 680 aa15.46■□□□□ 0.07
TUBE1-202ENST00000368662 IGKV5-2P06315 115 aa15.46■□□□□ 0.07
TUBE1-202ENST00000368662 UBTFL1P0CB47 393 aaPredicted RBP15.46■□□□□ 0.07
TUBE1-202ENST00000368662 SF3B2Q13435 895 aaKnown RBP15.46■□□□□ 0.07
TUBE1-202ENST00000368662 CWF19L2Q2TBE0 894 aaKnown RBP15.46■□□□□ 0.07
TUBE1-202ENST00000368662 C9orf78Q9NZ63 289 aaPredicted RBP15.46■□□□□ 0.07
TUBE1-202ENST00000368662 GNAI2P04899 355 aa15.46■□□□□ 0.06
TUBE1-202ENST00000368662 TCIRG1Q13488 830 aa15.46■□□□□ 0.06
TUBE1-202ENST00000368662 CCDC191Q8NCU4 936 aa15.46■□□□□ 0.06
TUBE1-202ENST00000368662 TBC1D2BQ9UPU7 963 aa15.46■□□□□ 0.06
TUBE1-202ENST00000368662 ADRA2BP18089 450 aa15.45■□□□□ 0.06
TUBE1-202ENST00000368662 TRIM28Q13263 835 aaKnown RBP15.45■□□□□ 0.06
TUBE1-202ENST00000368662 GCKRQ14397 625 aa15.45■□□□□ 0.06
TUBE1-202ENST00000368662 PROM2Q8N271 834 aa15.45■□□□□ 0.06
TUBE1-202ENST00000368662 ZNF652Q9Y2D9 606 aa15.45■□□□□ 0.06
TUBE1-202ENST00000368662 PCDHB15Q9Y5E8 787 aa15.45■□□□□ 0.06
TUBE1-202ENST00000368662 UTYO14607 1347 aa15.44■□□□□ 0.06
TUBE1-202ENST00000368662 GRM8O00222 908 aa15.44■□□□□ 0.06
TUBE1-202ENST00000368662 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
TUBE1-202ENST00000368662 CLEC4GQ6UXB4 293 aa15.44■□□□□ 0.06
TUBE1-202ENST00000368662 CCDC125Q86Z20 511 aa15.44■□□□□ 0.06
TUBE1-202ENST00000368662 RPAP2Q8IXW5 612 aaPredicted RBP15.44■□□□□ 0.06
TUBE1-202ENST00000368662 ISCA1Q9BUE6 129 aa15.44■□□□□ 0.06
TUBE1-202ENST00000368662 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
TUBE1-202ENST00000368662 CAMTA2O94983 1202 aa15.43■□□□□ 0.06
TUBE1-202ENST00000368662 HDAC1Q13547 482 aaPredicted RBP15.43■□□□□ 0.06
TUBE1-202ENST00000368662 ATP5J2-PTCD1G3V325 749 aa15.43■□□□□ 0.06
TUBE1-202ENST00000368662 BAG6P46379 1132 aa15.43■□□□□ 0.06
TUBE1-202ENST00000368662 TRAPPC3LQ5T215 181 aa15.43■□□□□ 0.06
TUBE1-202ENST00000368662 CENPQQ7L2Z9 268 aaPredicted RBP15.43■□□□□ 0.06
TUBE1-202ENST00000368662 C1orf115Q9H7X2 142 aa15.43■□□□□ 0.06
TUBE1-202ENST00000368662 NBPF7P0C2Y1 421 aaPredicted RBP15.42■□□□□ 0.06
TUBE1-202ENST00000368662 SSFA2P28290 1259 aa15.42■□□□□ 0.06
TUBE1-202ENST00000368662 HLFQ16534 295 aa15.42■□□□□ 0.06
TUBE1-202ENST00000368662 NARFQ9UHQ1 456 aa15.42■□□□□ 0.06
TUBE1-202ENST00000368662 ZPR1O75312 459 aa15.41■□□□□ 0.06
TUBE1-202ENST00000368662 AFDNP55196 1824 aaKnown RBP15.41■□□□□ 0.06
TUBE1-202ENST00000368662 CAMKK2Q96RR4 588 aa15.41■□□□□ 0.06
TUBE1-202ENST00000368662 HMMRO75330 724 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 RFC4P35249 363 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 CEP85Q6P2H3 762 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
TUBE1-202ENST00000368662 LRRFIP2Q9Y608 721 aaKnown RBP15.4■□□□□ 0.06
TUBE1-202ENST00000368662 NUP98P52948 1817 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 KDM2BQ8NHM5 1336 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 PARP10Q53GL7 1025 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 ZNF34Q8IZ26 560 aa15.4■□□□□ 0.06
TUBE1-202ENST00000368662 ANKRD36CQ5JPF3 1778 aa15.39■□□□□ 0.06
TUBE1-202ENST00000368662 H7C1W4 665 aa15.39■□□□□ 0.05
TUBE1-202ENST00000368662 EN1Q05925 392 aaPredicted RBP15.39■□□□□ 0.05
TUBE1-202ENST00000368662 FLAD1Q8NFF5 587 aa15.39■□□□□ 0.05
TUBE1-202ENST00000368662 SCN7AQ01118 1682 aa15.39■□□□□ 0.05
TUBE1-202ENST00000368662 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
TUBE1-202ENST00000368662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.38■□□□□ 0.05
TUBE1-202ENST00000368662 PHF14O94880 888 aa15.38■□□□□ 0.05
TUBE1-202ENST00000368662 IGHDP01880 384 aa15.38■□□□□ 0.05
TUBE1-202ENST00000368662 NLRP10Q86W26 655 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms