RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 ERVV-1B6SEH8 477 aa24.08■■□□□ 1.45
LMNA-204ENST00000368298 HYPKQ9NX55 129 aa24.08■■□□□ 1.45
LMNA-204ENST00000368298 ANXA1P04083 346 aa24.07■■□□□ 1.44
LMNA-204ENST00000368298 MMP10P09238 476 aa24.07■■□□□ 1.44
LMNA-204ENST00000368298 TTLL7Q6ZT98 887 aa24.07■■□□□ 1.44
LMNA-204ENST00000368298 MAP3K15Q6ZN16 1313 aa24.06■■□□□ 1.44
LMNA-204ENST00000368298 ZBED9Q6R2W3 1325 aa24.06■■□□□ 1.44
LMNA-204ENST00000368298 NFIXQ14938 502 aa24.05■■□□□ 1.44
LMNA-204ENST00000368298 COPS6Q7L5N1 327 aa24.05■■□□□ 1.44
LMNA-204ENST00000368298 PPP1R1BQ9UD71 204 aaPredicted RBP24.05■■□□□ 1.44
LMNA-204ENST00000368298 ZNF652Q9Y2D9 606 aa24.05■■□□□ 1.44
LMNA-204ENST00000368298 KIF6Q6ZMV9 814 aa24.04■■□□□ 1.44
LMNA-204ENST00000368298 CACNA1FO60840 1977 aa24.03■■□□□ 1.44
LMNA-204ENST00000368298 POLRMTO00411 1230 aaKnown RBP24.03■■□□□ 1.44
LMNA-204ENST00000368298 TBC1D9BQ66K14 1250 aa24.03■■□□□ 1.44
LMNA-204ENST00000368298 XAGE3Q8WTP9 111 aa24.03■■□□□ 1.44
LMNA-204ENST00000368298 PARP3Q9Y6F1 533 aa24.03■■□□□ 1.44
LMNA-204ENST00000368298 NUP98P52948 1817 aa24.03■■□□□ 1.44
LMNA-204ENST00000368298 DDR1Q08345 913 aa24.02■■□□□ 1.44
LMNA-204ENST00000368298 HLFQ16534 295 aa24.02■■□□□ 1.44
LMNA-204ENST00000368298 STK31Q9BXU1 1019 aa24.02■■□□□ 1.44
LMNA-204ENST00000368298 GIGYF2Q6Y7W6 1299 aaKnown RBP24.01■■□□□ 1.43
LMNA-204ENST00000368298 NRXN2Q9P2S2 1712 aa24.01■■□□□ 1.43
LMNA-204ENST00000368298 ATP10DQ9P241 1426 aa24■■□□□ 1.43
LMNA-204ENST00000368298 AIMP1Q12904 312 aaKnown RBP24■■□□□ 1.43
LMNA-204ENST00000368298 PLBD2Q8NHP8 589 aa24■■□□□ 1.43
LMNA-204ENST00000368298 ZNF428Q96B54 188 aa24■■□□□ 1.43
LMNA-204ENST00000368298 ZBTB3Q9H5J0 574 aa24■■□□□ 1.43
LMNA-204ENST00000368298 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
LMNA-204ENST00000368298 CT47B1P0C2W7 299 aaPredicted RBP23.99■■□□□ 1.43
LMNA-204ENST00000368298 ANKRD13DQ6ZTN6 518 aa23.99■■□□□ 1.43
LMNA-204ENST00000368298 SETDB2Q96T68 719 aa23.99■■□□□ 1.43
LMNA-204ENST00000368298 CD2APQ9Y5K6 639 aa23.99■■□□□ 1.43
LMNA-204ENST00000368298 CARMIL3Q8ND23 1372 aa23.98■■□□□ 1.43
LMNA-204ENST00000368298 SLC4A2P04920 1241 aa23.98■■□□□ 1.43
LMNA-204ENST00000368298 FHDC1Q9C0D6 1143 aaPredicted RBP23.98■■□□□ 1.43
LMNA-204ENST00000368298 AFDNP55196 1824 aaKnown RBP23.97■■□□□ 1.43
LMNA-204ENST00000368298 KIF13BQ9NQT8 1826 aa23.97■■□□□ 1.43
LMNA-204ENST00000368298 SERPINB2P05120 415 aa23.97■■□□□ 1.43
LMNA-204ENST00000368298 BICDL1Q6ZP65 573 aa23.97■■□□□ 1.43
LMNA-204ENST00000368298 SYT17Q9BSW7 474 aa23.97■■□□□ 1.43
LMNA-204ENST00000368298 ZNF34Q8IZ26 560 aa23.96■■□□□ 1.43
LMNA-204ENST00000368298 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
LMNA-204ENST00000368298 C10orf71Q711Q0 1435 aa23.95■■□□□ 1.42
LMNA-204ENST00000368298 NIP7Q9Y221 180 aaKnown RBP eCLIP23.95■■□□□ 1.42
LMNA-204ENST00000368298 HSP90AB3PQ58FF7 597 aa23.94■■□□□ 1.42
LMNA-204ENST00000368298 TCIRG1Q13488 830 aa23.94■■□□□ 1.42
LMNA-204ENST00000368298 ANKRD36CQ5JPF3 1778 aa23.93■■□□□ 1.42
LMNA-204ENST00000368298 DDX58O95786 925 aaKnown RBP23.93■■□□□ 1.42
LMNA-204ENST00000368298 G2E3Q7L622 706 aa23.93■■□□□ 1.42
LMNA-204ENST00000368298 ARFGEF2Q9Y6D5 1785 aa23.92■■□□□ 1.42
LMNA-204ENST00000368298 IBTKQ9P2D0 1353 aaPredicted RBP23.91■■□□□ 1.42
LMNA-204ENST00000368298 FLIIQ13045 1269 aa23.91■■□□□ 1.42
LMNA-204ENST00000368298 ALDH1L2Q3SY69 923 aa23.91■■□□□ 1.42
LMNA-204ENST00000368298 KSR2Q6VAB6 950 aa23.91■■□□□ 1.42
LMNA-204ENST00000368298 GTF3C3Q9Y5Q9 886 aa23.91■■□□□ 1.42
LMNA-204ENST00000368298 UBN2Q6ZU65 1347 aa23.91■■□□□ 1.42
LMNA-204ENST00000368298 TRIM28Q13263 835 aaKnown RBP23.9■■□□□ 1.42
LMNA-204ENST00000368298 PARP10Q53GL7 1025 aa23.9■■□□□ 1.42
LMNA-204ENST00000368298 RIC3Q7Z5B4 369 aa23.9■■□□□ 1.42
LMNA-204ENST00000368298 TGFB2P61812 414 aa23.89■■□□□ 1.42
LMNA-204ENST00000368298 PRR5LQ6MZQ0 368 aa23.89■■□□□ 1.42
LMNA-204ENST00000368298 TPTE2Q6XPS3 522 aa23.89■■□□□ 1.42
LMNA-204ENST00000368298 NBPF5PQ86XG9 351 aaPredicted RBP23.89■■□□□ 1.42
LMNA-204ENST00000368298 SSH1Q8WYL5 1049 aa23.88■■□□□ 1.41
LMNA-204ENST00000368298 ISCA1Q9BUE6 129 aa23.88■■□□□ 1.41
LMNA-204ENST00000368298 KIAA1551Q9HCM1 1747 aa23.88■■□□□ 1.41
LMNA-204ENST00000368298 ADCY9O60503 1353 aa23.88■■□□□ 1.41
LMNA-204ENST00000368298 PI4KAP2A4QPH2 592 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 GPTP24298 496 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 SUSD4Q5VX71 490 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 MRPL50Q8N5N7 158 aaKnown RBP23.87■■□□□ 1.41
LMNA-204ENST00000368298 PI4KAP1Q8N8J0 262 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 CNBD1Q8NA66 436 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 METTL22Q9BUU2 404 aaPredicted RBP23.87■■□□□ 1.41
LMNA-204ENST00000368298 NYXQ9GZU5 481 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 BRPF1P55201 1214 aaPredicted RBP23.87■■□□□ 1.41
LMNA-204ENST00000368298 NLRP10Q86W26 655 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 KLHL34Q8N239 644 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 NLGN2Q8NFZ4 835 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 MAP3K2Q9Y2U5 619 aa23.87■■□□□ 1.41
LMNA-204ENST00000368298 PPP1R42Q7Z4L9 355 aa23.86■■□□□ 1.41
LMNA-204ENST00000368298 BRIP1Q9BX63 1249 aa23.86■■□□□ 1.41
LMNA-204ENST00000368298 RNF123Q5XPI4 1314 aa23.86■■□□□ 1.41
LMNA-204ENST00000368298 PXDNLA1KZ92 1463 aa23.85■■□□□ 1.41
LMNA-204ENST00000368298 NTSR2O95665 410 aa23.85■■□□□ 1.41
LMNA-204ENST00000368298 FKBP5Q13451 457 aaPredicted RBP23.85■■□□□ 1.41
LMNA-204ENST00000368298 ANKRD31Q8N7Z5 1873 aa23.84■■□□□ 1.41
LMNA-204ENST00000368298 RARSP54136 660 aaKnown RBP23.84■■□□□ 1.41
LMNA-204ENST00000368298 ST5P78524 1137 aa23.84■■□□□ 1.41
LMNA-204ENST00000368298 UTP14AQ9BVJ6 771 aaKnown RBP23.83■■□□□ 1.41
LMNA-204ENST00000368298 RIC1Q4ADV7 1423 aa23.83■■□□□ 1.41
LMNA-204ENST00000368298 ATP5J2-PTCD1G3V325 749 aa23.82■■□□□ 1.4
LMNA-204ENST00000368298 PDZRN3Q9UPQ7 1066 aa23.82■■□□□ 1.4
LMNA-204ENST00000368298 KLRG2A4D1S0 409 aaPredicted RBP23.81■■□□□ 1.4
LMNA-204ENST00000368298 NPHP1O15259 732 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 PDE6BP35913 854 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 CCDC191Q8NCU4 936 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 DNAAF4Q8WXU2 420 aa23.81■■□□□ 1.4
LMNA-204ENST00000368298 MYD88Q99836 296 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms