RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 NECAB1Q8N987 351 aa14.82□□□□□ -0.04
PTPN7-202ENST00000367279 UBE2Q2Q8WVN8 375 aa14.82□□□□□ -0.04
PTPN7-202ENST00000367279 DBF4Q9UBU7 674 aaPredicted RBP14.82□□□□□ -0.04
PTPN7-202ENST00000367279 XRN1Q8IZH2 1706 aaKnown RBP14.82□□□□□ -0.04
PTPN7-202ENST00000367279 ZSCAN22P10073 491 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-202ENST00000367279 TCEANC2Q96MN5 208 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 BABAM1Q9NWV8 329 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 CCDC9Q9Y3X0 531 aaKnown RBP14.81□□□□□ -0.04
PTPN7-202ENST00000367279 ADCK5Q3MIX3 580 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 ZNF830Q96NB3 372 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-202ENST00000367279 ECHDC1Q9NTX5 307 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 USP25Q9UHP3 1055 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 TCHHQ07283 1943 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 MYL6BP14649 208 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 GJB2P29033 226 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 GLIPR1L2Q4G1C9 344 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 PDLIM2Q96JY6 352 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 ZKSCAN5Q9Y2L8 839 aa14.81□□□□□ -0.04
PTPN7-202ENST00000367279 G3BP1Q13283 466 aaKnown RBP eCLIP14.8□□□□□ -0.04
PTPN7-202ENST00000367279 JARID2Q92833 1246 aaPredicted RBP14.8□□□□□ -0.04
PTPN7-202ENST00000367279 FAM13BQ9NYF5 915 aa14.8□□□□□ -0.04
PTPN7-202ENST00000367279 HCLS1P14317 486 aaPredicted RBP14.8□□□□□ -0.04
PTPN7-202ENST00000367279 AKAP4Q5JQC9 854 aa14.8□□□□□ -0.04
PTPN7-202ENST00000367279 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
PTPN7-202ENST00000367279 BOLA2Q9H3K6 86 aa14.8□□□□□ -0.04
PTPN7-202ENST00000367279 CYP46A1Q9Y6A2 500 aa14.8□□□□□ -0.04
PTPN7-202ENST00000367279 FERMT3Q86UX7 667 aa14.79□□□□□ -0.04
PTPN7-202ENST00000367279 ZKSCAN1P17029 563 aaPredicted RBP14.79□□□□□ -0.04
PTPN7-202ENST00000367279 ADCY9O60503 1353 aa14.79□□□□□ -0.04
PTPN7-202ENST00000367279 RPAP1Q9BWH6 1393 aaPredicted RBP14.79□□□□□ -0.04
PTPN7-202ENST00000367279 RRP9O43818 475 aaKnown RBP14.79□□□□□ -0.04
PTPN7-202ENST00000367279 DNM1Q05193 864 aaKnown RBP14.79□□□□□ -0.04
PTPN7-202ENST00000367279 RIC3Q7Z5B4 369 aa14.79□□□□□ -0.04
PTPN7-202ENST00000367279 FAM227BQ96M60 508 aa14.79□□□□□ -0.04
PTPN7-202ENST00000367279 CHMP4AQ9BY43 222 aa14.79□□□□□ -0.04
PTPN7-202ENST00000367279 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.79□□□□□ -0.04
PTPN7-202ENST00000367279 RNMTO43148 476 aaKnown RBP14.78□□□□□ -0.04
PTPN7-202ENST00000367279 SLC39A6Q13433 755 aa14.78□□□□□ -0.04
PTPN7-202ENST00000367279 FSD1Q9BTV5 496 aa14.78□□□□□ -0.04
PTPN7-202ENST00000367279 F13A1P00488 732 aa14.78□□□□□ -0.04
PTPN7-202ENST00000367279 PIP4K2AP48426 406 aaPredicted RBP14.78□□□□□ -0.04
PTPN7-202ENST00000367279 HS1BP3Q53T59 392 aa14.78□□□□□ -0.04
PTPN7-202ENST00000367279 GIMAP6Q6P9H5 292 aa14.78□□□□□ -0.04
PTPN7-202ENST00000367279 TTC14Q96N46 770 aa14.78□□□□□ -0.04
PTPN7-202ENST00000367279 KIF13AQ9H1H9 1805 aa14.78□□□□□ -0.04
PTPN7-202ENST00000367279 STK3Q13188 491 aa14.77□□□□□ -0.04
PTPN7-202ENST00000367279 CCDC183Q5T5S1 534 aa14.77□□□□□ -0.04
PTPN7-202ENST00000367279 KSR2Q6VAB6 950 aa14.77□□□□□ -0.04
PTPN7-202ENST00000367279 TTC41PQ6P2S7 1318 aa14.77□□□□□ -0.04
PTPN7-202ENST00000367279 BICC1Q9H694 974 aaKnown RBP14.77□□□□□ -0.04
PTPN7-202ENST00000367279 ATP6V1DQ9Y5K8 247 aa14.77□□□□□ -0.04
PTPN7-202ENST00000367279 RBM8AQ9Y5S9 174 aaKnown RBP14.77□□□□□ -0.04
PTPN7-202ENST00000367279 PXDNLA1KZ92 1463 aa14.77□□□□□ -0.04
PTPN7-202ENST00000367279 KCNH5Q8NCM2 988 aa14.77□□□□□ -0.05
PTPN7-202ENST00000367279 ANKRD24Q8TF21 1146 aa14.77□□□□□ -0.05
PTPN7-202ENST00000367279 SUCLG2Q96I99 432 aa14.77□□□□□ -0.05
PTPN7-202ENST00000367279 ORAI2Q96SN7 254 aa14.77□□□□□ -0.05
PTPN7-202ENST00000367279 NWD1Q149M9 1564 aa14.77□□□□□ -0.05
PTPN7-202ENST00000367279 CACNA1FO60840 1977 aa14.76□□□□□ -0.05
PTPN7-202ENST00000367279 UQCRHLA0A096LP55 91 aa14.76□□□□□ -0.05
PTPN7-202ENST00000367279 UQCRHP07919 91 aa14.76□□□□□ -0.05
PTPN7-202ENST00000367279 NMIQ13287 307 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-202ENST00000367279 VSIG10Q8N0Z9 540 aa14.76□□□□□ -0.05
PTPN7-202ENST00000367279 HYPKQ9NX55 129 aa14.76□□□□□ -0.05
PTPN7-202ENST00000367279 ZC3H6P61129 1189 aaKnown RBP14.76□□□□□ -0.05
PTPN7-202ENST00000367279 ERC1Q8IUD2 1116 aa14.76□□□□□ -0.05
PTPN7-202ENST00000367279 TLR7Q9NYK1 1049 aaKnown RBP14.76□□□□□ -0.05
PTPN7-202ENST00000367279 CEMIPQ8WUJ3 1361 aa14.76□□□□□ -0.05
PTPN7-202ENST00000367279 GIGYF1O75420 1035 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-202ENST00000367279 FAM173BQ6P4H8 233 aa14.76□□□□□ -0.05
PTPN7-202ENST00000367279 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.76□□□□□ -0.05
PTPN7-202ENST00000367279 GRM8O00222 908 aa14.75□□□□□ -0.05
PTPN7-202ENST00000367279 DDX58O95786 925 aaKnown RBP14.75□□□□□ -0.05
PTPN7-202ENST00000367279 GCP02774 474 aa14.75□□□□□ -0.05
PTPN7-202ENST00000367279 UBE2HP62256 183 aa14.75□□□□□ -0.05
PTPN7-202ENST00000367279 EVI5LQ96CN4 794 aa14.75□□□□□ -0.05
PTPN7-202ENST00000367279 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.75□□□□□ -0.05
PTPN7-202ENST00000367279 ANKARQ7Z5J8 1434 aa14.75□□□□□ -0.05
PTPN7-202ENST00000367279 HOXB7P09629 217 aa14.75□□□□□ -0.05
PTPN7-202ENST00000367279 LARP1BQ659C4 914 aaKnown RBP14.75□□□□□ -0.05
PTPN7-202ENST00000367279 EAF2Q96CJ1 260 aaPredicted RBP14.75□□□□□ -0.05
PTPN7-202ENST00000367279 ADCY5O95622 1261 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 EDC3Q96F86 508 aaKnown RBP14.74□□□□□ -0.05
PTPN7-202ENST00000367279 LRRC37A3O60309 1634 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 ZNF500O60304 480 aaPredicted RBP14.74□□□□□ -0.05
PTPN7-202ENST00000367279 KIAA2012Q0VF49 1180 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 ME3Q16798 604 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 AMOTQ4VCS5 1084 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 CREB3L3Q68CJ9 461 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 NDUFB9Q9Y6M9 179 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 CCDC171Q6TFL3 1326 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 ALDH1L1O75891 902 aa14.74□□□□□ -0.05
PTPN7-202ENST00000367279 TTC12Q9H892 705 aaPredicted RBP14.74□□□□□ -0.05
PTPN7-202ENST00000367279 CAMK4Q16566 473 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 CSPP1Q1MSJ5 1256 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 C17orf53Q8N3J3 647 aaPredicted RBP14.73□□□□□ -0.05
PTPN7-202ENST00000367279 NLRP2Q9NX02 1062 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 HDAC5Q9UQL6 1122 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 GOLGA6L4A6NEF3 574 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 SASH1O94885 1247 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms