RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 CNBD1Q8NA66 436 aa10.78□□□□□ -0.68
PACRG-202ENST00000366888 TAOK3Q9H2K8 898 aa10.78□□□□□ -0.68
PACRG-202ENST00000366888 DLG5Q8TDM6 1919 aa10.78□□□□□ -0.68
PACRG-202ENST00000366888 LAMB4A4D0S4 1761 aa10.78□□□□□ -0.68
PACRG-202ENST00000366888 PRAMEF22A3QJZ6 481 aa10.77□□□□□ -0.68
PACRG-202ENST00000366888 GAS2L2Q8NHY3 880 aa10.77□□□□□ -0.68
PACRG-202ENST00000366888 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.68
PACRG-202ENST00000366888 SETDB2Q96T68 719 aa10.77□□□□□ -0.68
PACRG-202ENST00000366888 LTBP3Q9NS15 1303 aa10.77□□□□□ -0.69
PACRG-202ENST00000366888 NUP98P52948 1817 aa10.77□□□□□ -0.69
PACRG-202ENST00000366888 SRGNP10124 158 aa10.77□□□□□ -0.69
PACRG-202ENST00000366888 ST5P78524 1137 aa10.77□□□□□ -0.69
PACRG-202ENST00000366888 CHADLQ6NUI6 762 aa10.77□□□□□ -0.69
PACRG-202ENST00000366888 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.69
PACRG-202ENST00000366888 PHACTR3Q96KR7 559 aa10.77□□□□□ -0.69
PACRG-202ENST00000366888 TEX13AQ9BXU3 409 aaPredicted RBP10.77□□□□□ -0.69
PACRG-202ENST00000366888 USP16Q9Y5T5 823 aa10.77□□□□□ -0.69
PACRG-202ENST00000366888 CEMIPQ8WUJ3 1361 aa10.76□□□□□ -0.69
PACRG-202ENST00000366888 BTBD11A6QL63 1104 aa10.76□□□□□ -0.69
PACRG-202ENST00000366888 STYK1Q6J9G0 422 aa10.76□□□□□ -0.69
PACRG-202ENST00000366888 OLFM4Q6UX06 510 aa10.76□□□□□ -0.69
PACRG-202ENST00000366888 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
PACRG-202ENST00000366888 CNKSR1Q969H4 720 aa10.76□□□□□ -0.69
PACRG-202ENST00000366888 PDZRN3Q9UPQ7 1066 aa10.76□□□□□ -0.69
PACRG-202ENST00000366888 ADAMTSL1Q8N6G6 1762 aa10.75□□□□□ -0.69
PACRG-202ENST00000366888 FAM177BA6PVY3 158 aa10.75□□□□□ -0.69
PACRG-202ENST00000366888 PRKAR2BP31323 418 aa10.75□□□□□ -0.69
PACRG-202ENST00000366888 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
PACRG-202ENST00000366888 NBPF5PQ86XG9 351 aaPredicted RBP10.74□□□□□ -0.69
PACRG-202ENST00000366888 MASTLQ96GX5 879 aa10.74□□□□□ -0.69
PACRG-202ENST00000366888 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
PACRG-202ENST00000366888 ZNF541Q9H0D2 1346 aa10.73□□□□□ -0.69
PACRG-202ENST00000366888 FOXN1O15353 648 aa10.73□□□□□ -0.69
PACRG-202ENST00000366888 DCTN1Q14203 1278 aa10.73□□□□□ -0.69
PACRG-202ENST00000366888 CCDC93Q567U6 631 aa10.73□□□□□ -0.69
PACRG-202ENST00000366888 EAPPQ56P03 285 aaPredicted RBP10.73□□□□□ -0.69
PACRG-202ENST00000366888 MCM10Q7L590 875 aa10.73□□□□□ -0.69
PACRG-202ENST00000366888 C7orf43Q8WVR3 580 aa10.73□□□□□ -0.69
PACRG-202ENST00000366888 TAF1DQ9H5J8 278 aaPredicted RBP10.73□□□□□ -0.69
PACRG-202ENST00000366888 ZNF277Q9NRM2 450 aaPredicted RBP10.73□□□□□ -0.69
PACRG-202ENST00000366888 KDM3BQ7LBC6 1761 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 CNTNAP1P78357 1384 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 NBPF26B4DH59 902 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 NPR1P16066 1061 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 LTBP1Q14766 1721 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 SOGA3Q5TF21 947 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 NBPF10Q6P3W6 841 aaKnown RBP10.72□□□□□ -0.69
PACRG-202ENST00000366888 LDHDQ86WU2 507 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 NBPF15Q8N660 670 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 NIP7Q9Y221 180 aaKnown RBP eCLIP10.72□□□□□ -0.69
PACRG-202ENST00000366888 PASKQ96RG2 1323 aa10.72□□□□□ -0.69
PACRG-202ENST00000366888 NPC1L1Q9UHC9 1359 aa10.71□□□□□ -0.69
PACRG-202ENST00000366888 IQCA1LA6NCM1 817 aa10.71□□□□□ -0.69
PACRG-202ENST00000366888 HLFQ16534 295 aa10.71□□□□□ -0.69
PACRG-202ENST00000366888 COL4A5P29400 1685 aa10.71□□□□□ -0.7
PACRG-202ENST00000366888 RNF123Q5XPI4 1314 aa10.71□□□□□ -0.7
PACRG-202ENST00000366888 TRPM7Q96QT4 1865 aa10.71□□□□□ -0.7
PACRG-202ENST00000366888 SNRPA1P09661 255 aaKnown RBP10.7□□□□□ -0.7
PACRG-202ENST00000366888 VEGFBP49765 207 aa10.7□□□□□ -0.7
PACRG-202ENST00000366888 FKBP4Q02790 459 aaKnown RBP eCLIP10.7□□□□□ -0.7
PACRG-202ENST00000366888 SLC51AQ86UW1 340 aa10.7□□□□□ -0.7
PACRG-202ENST00000366888 L3MBTL3Q96JM7 780 aaPredicted RBP10.7□□□□□ -0.7
PACRG-202ENST00000366888 CLEC11AQ9Y240 323 aa10.7□□□□□ -0.7
PACRG-202ENST00000366888 ZNF652Q9Y2D9 606 aa10.7□□□□□ -0.7
PACRG-202ENST00000366888 ABCC12Q96J65 1359 aa10.7□□□□□ -0.7
PACRG-202ENST00000366888 ITGBL1O95965 494 aaPredicted RBP10.69□□□□□ -0.7
PACRG-202ENST00000366888 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
PACRG-202ENST00000366888 EPHX2P34913 555 aa10.69□□□□□ -0.7
PACRG-202ENST00000366888 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.7
PACRG-202ENST00000366888 CLEC4GQ6UXB4 293 aa10.69□□□□□ -0.7
PACRG-202ENST00000366888 TPTE2Q6XPS3 522 aa10.69□□□□□ -0.7
PACRG-202ENST00000366888 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
PACRG-202ENST00000366888 RTF1Q92541 710 aaKnown RBP10.69□□□□□ -0.7
PACRG-202ENST00000366888 CFAP53Q96M91 514 aa10.69□□□□□ -0.7
PACRG-202ENST00000366888 MIS18AQ9NYP9 233 aa10.69□□□□□ -0.7
PACRG-202ENST00000366888 HACL1Q9UJ83 578 aa10.69□□□□□ -0.7
PACRG-202ENST00000366888 LAMB2P55268 1798 aa10.68□□□□□ -0.7
PACRG-202ENST00000366888 KLRG2A4D1S0 409 aaPredicted RBP10.68□□□□□ -0.7
PACRG-202ENST00000366888 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
PACRG-202ENST00000366888 IARSP41252 1262 aaKnown RBP10.68□□□□□ -0.7
PACRG-202ENST00000366888 MAP1SQ66K74 1059 aaPredicted RBP10.68□□□□□ -0.7
PACRG-202ENST00000366888 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
PACRG-202ENST00000366888 SYNE4Q8N205 404 aa10.68□□□□□ -0.7
PACRG-202ENST00000366888 SNED1Q8TER0 1413 aa10.68□□□□□ -0.7
PACRG-202ENST00000366888 GTF2E1P29083 439 aaPredicted RBP10.67□□□□□ -0.7
PACRG-202ENST00000366888 AIDAQ96BJ3 306 aa10.67□□□□□ -0.7
PACRG-202ENST00000366888 TAF1P21675 1872 aa10.67□□□□□ -0.7
PACRG-202ENST00000366888 ANKRD36CQ5JPF3 1778 aa10.66□□□□□ -0.7
PACRG-202ENST00000366888 LBX1P52954 281 aa10.66□□□□□ -0.7
PACRG-202ENST00000366888 FMR1Q06787 632 aaKnown RBP eCLIP10.66□□□□□ -0.7
PACRG-202ENST00000366888 RTKN2Q8IZC4 609 aa10.66□□□□□ -0.7
PACRG-202ENST00000366888 CNTROBQ8N137 903 aa10.66□□□□□ -0.7
PACRG-202ENST00000366888 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
PACRG-202ENST00000366888 GJA3Q9Y6H8 435 aa10.66□□□□□ -0.7
PACRG-202ENST00000366888 THSD7BQ9C0I4 1608 aa10.66□□□□□ -0.7
PACRG-202ENST00000366888 FZD9O00144 591 aa10.65□□□□□ -0.7
PACRG-202ENST00000366888 TCERG1O14776 1098 aaKnown RBP10.65□□□□□ -0.7
PACRG-202ENST00000366888 GPTP24298 496 aa10.65□□□□□ -0.7
PACRG-202ENST00000366888 PPP2R1AP30153 589 aa10.65□□□□□ -0.7
PACRG-202ENST00000366888 ALDH1B1P30837 517 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms