RNA–Protein interactions for RNA: ENST00000366782.5

PSEN2-201, Transcript of presenilin 2, humanhuman

TSL 1 (best) BASIC

Gene PSEN2, Length 2,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-201ENST00000366782 RUFY3Q7L099 469 aa17.47■□□□□ 0.39
PSEN2-201ENST00000366782 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
PSEN2-201ENST00000366782 PTH1RQ03431 593 aa17.46■□□□□ 0.39
PSEN2-201ENST00000366782 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
PSEN2-201ENST00000366782 MBD3O95983 291 aa17.46■□□□□ 0.39
PSEN2-201ENST00000366782 KAZALD1Q96I82 304 aa17.46■□□□□ 0.39
PSEN2-201ENST00000366782 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.46■□□□□ 0.39
PSEN2-201ENST00000366782 ADGRL3Q9HAR2 1447 aa17.46■□□□□ 0.38
PSEN2-201ENST00000366782 TTC41PQ6P2S7 1318 aa17.45■□□□□ 0.38
PSEN2-201ENST00000366782 AMOTQ4VCS5 1084 aa17.45■□□□□ 0.38
PSEN2-201ENST00000366782 HSP90AB4PQ58FF6 505 aa17.45■□□□□ 0.38
PSEN2-201ENST00000366782 KSR2Q6VAB6 950 aa17.45■□□□□ 0.38
PSEN2-201ENST00000366782 USP48Q86UV5 1035 aa17.45■□□□□ 0.38
PSEN2-201ENST00000366782 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
PSEN2-201ENST00000366782 NCAPD2Q15021 1401 aa17.45■□□□□ 0.38
PSEN2-201ENST00000366782 GLRX3O76003 335 aaKnown RBP17.45■□□□□ 0.38
PSEN2-201ENST00000366782 LARGE1O95461 756 aa17.45■□□□□ 0.38
PSEN2-201ENST00000366782 ANKRD24Q8TF21 1146 aa17.45■□□□□ 0.38
PSEN2-201ENST00000366782 ADCK5Q3MIX3 580 aa17.44■□□□□ 0.38
PSEN2-201ENST00000366782 C1orf141Q5JVX7 400 aa17.44■□□□□ 0.38
PSEN2-201ENST00000366782 KIAA1211Q6ZU35 1233 aa17.44■□□□□ 0.38
PSEN2-201ENST00000366782 RNF214Q8ND24 703 aa17.44■□□□□ 0.38
PSEN2-201ENST00000366782 CLASRPQ8N2M8 674 aaKnown RBP17.44■□□□□ 0.38
PSEN2-201ENST00000366782 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
PSEN2-201ENST00000366782 ALDH1L1O75891 902 aa17.43■□□□□ 0.38
PSEN2-201ENST00000366782 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
PSEN2-201ENST00000366782 ECHDC1Q9NTX5 307 aa17.43■□□□□ 0.38
PSEN2-201ENST00000366782 SASH1O94885 1247 aa17.42■□□□□ 0.38
PSEN2-201ENST00000366782 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
PSEN2-201ENST00000366782 PDIA6Q15084 440 aa17.42■□□□□ 0.38
PSEN2-201ENST00000366782 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
PSEN2-201ENST00000366782 CHMP4AQ9BY43 222 aa17.42■□□□□ 0.38
PSEN2-201ENST00000366782 LIMCH1Q9UPQ0 1083 aa17.42■□□□□ 0.38
PSEN2-201ENST00000366782 SIPA1L3O60292 1781 aaPredicted RBP17.42■□□□□ 0.38
PSEN2-201ENST00000366782 COL9A3Q14050 684 aaPredicted RBP17.42■□□□□ 0.38
PSEN2-201ENST00000366782 DIAPH3Q9NSV4 1193 aa17.42■□□□□ 0.38
PSEN2-201ENST00000366782 HYPKQ9NX55 129 aa17.42■□□□□ 0.38
PSEN2-201ENST00000366782 SLIT3O75094 1523 aa17.41■□□□□ 0.38
PSEN2-201ENST00000366782 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
PSEN2-201ENST00000366782 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
PSEN2-201ENST00000366782 CNPY2Q9Y2B0 182 aa17.41■□□□□ 0.38
PSEN2-201ENST00000366782 SYT1P21579 422 aa17.41■□□□□ 0.38
PSEN2-201ENST00000366782 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
PSEN2-201ENST00000366782 AACSQ86V21 672 aa17.41■□□□□ 0.38
PSEN2-201ENST00000366782 PDCL3Q9H2J4 239 aa17.41■□□□□ 0.38
PSEN2-201ENST00000366782 BICC1Q9H694 974 aaKnown RBP17.41■□□□□ 0.38
PSEN2-201ENST00000366782 RGPD5Q99666 1765 aa17.4■□□□□ 0.38
PSEN2-201ENST00000366782 OFD1O75665 1012 aa17.4■□□□□ 0.38
PSEN2-201ENST00000366782 EAF2Q96CJ1 260 aaPredicted RBP17.4■□□□□ 0.38
PSEN2-201ENST00000366782 NOL7Q9UMY1 257 aaKnown RBP17.4■□□□□ 0.38
PSEN2-201ENST00000366782 GRM8O00222 908 aa17.4■□□□□ 0.38
PSEN2-201ENST00000366782 IFIT2P09913 472 aaKnown RBP17.4■□□□□ 0.38
PSEN2-201ENST00000366782 ZSCAN22P10073 491 aaPredicted RBP17.4■□□□□ 0.38
PSEN2-201ENST00000366782 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
PSEN2-201ENST00000366782 HS1BP3Q53T59 392 aa17.4■□□□□ 0.38
PSEN2-201ENST00000366782 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
PSEN2-201ENST00000366782 IGKV5-2P06315 115 aa17.39■□□□□ 0.37
PSEN2-201ENST00000366782 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
PSEN2-201ENST00000366782 FAM227BQ96M60 508 aa17.39■□□□□ 0.37
PSEN2-201ENST00000366782 CCDC8Q9H0W5 538 aaPredicted RBP17.39■□□□□ 0.37
PSEN2-201ENST00000366782 STX6O43752 255 aa17.39■□□□□ 0.37
PSEN2-201ENST00000366782 MSNP26038 577 aaKnown RBP17.39■□□□□ 0.37
PSEN2-201ENST00000366782 NECTIN1Q15223 517 aa17.39■□□□□ 0.37
PSEN2-201ENST00000366782 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
PSEN2-201ENST00000366782 KCNB2Q92953 911 aa17.39■□□□□ 0.37
PSEN2-201ENST00000366782 JAKMIP1Q96N16 626 aaKnown RBP17.39■□□□□ 0.37
PSEN2-201ENST00000366782 OVOS2A0A0G2JMS6 1433 aa17.39■□□□□ 0.37
PSEN2-201ENST00000366782 UTYO14607 1347 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 TPRNQ4KMQ1 711 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 TMEM87AQ8NBN3 555 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 CAMTA1Q9Y6Y1 1673 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 CCDC83Q8IWF9 413 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 EVI5LQ96CN4 794 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 ZSWIM6Q9HCJ5 1215 aa17.38■□□□□ 0.37
PSEN2-201ENST00000366782 DDX21Q9NR30 783 aaKnown RBP eCLIP17.38■□□□□ 0.37
PSEN2-201ENST00000366782 RUFY2Q8WXA3 655 aa17.37■□□□□ 0.37
PSEN2-201ENST00000366782 PDRG1Q9NUG6 133 aa17.37■□□□□ 0.37
PSEN2-201ENST00000366782 ERC1Q8IUD2 1116 aa17.37■□□□□ 0.37
PSEN2-201ENST00000366782 SMC3Q9UQE7 1217 aa17.37■□□□□ 0.37
PSEN2-201ENST00000366782 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
PSEN2-201ENST00000366782 F13A1P00488 732 aa17.36■□□□□ 0.37
PSEN2-201ENST00000366782 VPS53Q5VIR6 699 aa17.36■□□□□ 0.37
PSEN2-201ENST00000366782 SIL1Q9H173 461 aa17.36■□□□□ 0.37
PSEN2-201ENST00000366782 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.36■□□□□ 0.37
PSEN2-201ENST00000366782 TRPM3Q9HCF6 1732 aaPredicted RBP17.36■□□□□ 0.37
PSEN2-201ENST00000366782 NMIQ13287 307 aaPredicted RBP17.36■□□□□ 0.37
PSEN2-201ENST00000366782 EPHA10Q5JZY3 1008 aa17.36■□□□□ 0.37
PSEN2-201ENST00000366782 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 C5P01031 1676 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 GJB2P29033 226 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 ME3Q16798 604 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
PSEN2-201ENST00000366782 ZNF142P52746 1687 aaPredicted RBP17.35■□□□□ 0.37
PSEN2-201ENST00000366782 MYL6BP14649 208 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
PSEN2-201ENST00000366782 RBM10P98175 930 aaKnown RBP17.35■□□□□ 0.37
PSEN2-201ENST00000366782 ZNF790Q6PG37 636 aa17.35■□□□□ 0.37
PSEN2-201ENST00000366782 KRT28Q7Z3Y7 464 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms