RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
CAPN9-203ENST00000366666 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
CAPN9-203ENST00000366666 MEIS3Q99687 375 aa15.43■□□□□ 0.06
CAPN9-203ENST00000366666 TNS1Q9HBL0 1735 aaKnown RBP15.43■□□□□ 0.06
CAPN9-203ENST00000366666 CWF19L2Q2TBE0 894 aaKnown RBP15.43■□□□□ 0.06
CAPN9-203ENST00000366666 BEND3Q5T5X7 828 aa15.43■□□□□ 0.06
CAPN9-203ENST00000366666 ANKRD13DQ6ZTN6 518 aa15.43■□□□□ 0.06
CAPN9-203ENST00000366666 RIC3Q7Z5B4 369 aa15.43■□□□□ 0.06
CAPN9-203ENST00000366666 CCNL1Q9UK58 526 aaPredicted RBP15.43■□□□□ 0.06
CAPN9-203ENST00000366666 AFDNP55196 1824 aaKnown RBP15.42■□□□□ 0.06
CAPN9-203ENST00000366666 ZBTB3Q9H5J0 574 aa15.42■□□□□ 0.06
CAPN9-203ENST00000366666 CCDC87Q9NVE4 849 aa15.42■□□□□ 0.06
CAPN9-203ENST00000366666 PXDNLA1KZ92 1463 aa15.42■□□□□ 0.06
CAPN9-203ENST00000366666 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
CAPN9-203ENST00000366666 CCT4P50991 539 aaKnown RBP15.41■□□□□ 0.06
CAPN9-203ENST00000366666 PROM2Q8N271 834 aa15.41■□□□□ 0.06
CAPN9-203ENST00000366666 IGKV5-2P06315 115 aa15.41■□□□□ 0.06
CAPN9-203ENST00000366666 ARXQ96QS3 562 aa15.41■□□□□ 0.06
CAPN9-203ENST00000366666 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
CAPN9-203ENST00000366666 PLBD2Q8NHP8 589 aa15.4■□□□□ 0.06
CAPN9-203ENST00000366666 MYD88Q99836 296 aa15.4■□□□□ 0.06
CAPN9-203ENST00000366666 USP44Q9H0E7 712 aa15.4■□□□□ 0.06
CAPN9-203ENST00000366666 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
CAPN9-203ENST00000366666 NUP98P52948 1817 aa15.4■□□□□ 0.06
CAPN9-203ENST00000366666 C4BP0C0L5 1744 aa15.39■□□□□ 0.05
CAPN9-203ENST00000366666 ATP5J2-PTCD1G3V325 749 aa15.39■□□□□ 0.05
CAPN9-203ENST00000366666 IGHDP01880 384 aa15.39■□□□□ 0.05
CAPN9-203ENST00000366666 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
CAPN9-203ENST00000366666 SRCIN1Q9C0H9 1055 aa15.39■□□□□ 0.05
CAPN9-203ENST00000366666 ATP10DQ9P241 1426 aa15.39■□□□□ 0.05
CAPN9-203ENST00000366666 APBA3O96018 575 aa15.39■□□□□ 0.05
CAPN9-203ENST00000366666 IL6STP40189 918 aaPredicted RBP15.39■□□□□ 0.05
CAPN9-203ENST00000366666 METTL22Q9BUU2 404 aaPredicted RBP15.39■□□□□ 0.05
CAPN9-203ENST00000366666 NBPF7P0C2Y1 421 aaPredicted RBP15.38■□□□□ 0.05
CAPN9-203ENST00000366666 HLFQ16534 295 aa15.38■□□□□ 0.05
CAPN9-203ENST00000366666 ANP32AP39687 249 aaKnown RBP15.38■□□□□ 0.05
CAPN9-203ENST00000366666 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
CAPN9-203ENST00000366666 JARID2Q92833 1246 aaPredicted RBP15.37■□□□□ 0.05
CAPN9-203ENST00000366666 CNTNAP4Q9C0A0 1308 aa15.37■□□□□ 0.05
CAPN9-203ENST00000366666 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
CAPN9-203ENST00000366666 TXNRD1Q16881 649 aa15.36■□□□□ 0.05
CAPN9-203ENST00000366666 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
CAPN9-203ENST00000366666 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
CAPN9-203ENST00000366666 LINS1Q8NG48 757 aa15.36■□□□□ 0.05
CAPN9-203ENST00000366666 IPO9Q96P70 1041 aaKnown RBP15.36■□□□□ 0.05
CAPN9-203ENST00000366666 ANKRD36CQ5JPF3 1778 aa15.36■□□□□ 0.05
CAPN9-203ENST00000366666 COL15A1P39059 1388 aa15.36■□□□□ 0.05
CAPN9-203ENST00000366666 MAP3K15Q6ZN16 1313 aa15.35■□□□□ 0.05
CAPN9-203ENST00000366666 GNPATO15228 680 aa15.35■□□□□ 0.05
CAPN9-203ENST00000366666 SKAP1Q86WV1 359 aa15.35■□□□□ 0.05
CAPN9-203ENST00000366666 UBR3Q6ZT12 1888 aa15.35■□□□□ 0.05
CAPN9-203ENST00000366666 KDM2BQ8NHM5 1336 aa15.35■□□□□ 0.05
CAPN9-203ENST00000366666 C4AP0C0L4 1744 aa15.35■□□□□ 0.05
CAPN9-203ENST00000366666 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
CAPN9-203ENST00000366666 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
CAPN9-203ENST00000366666 PLSCR1O15162 318 aa15.34■□□□□ 0.05
CAPN9-203ENST00000366666 ALDH1L1O75891 902 aa15.34■□□□□ 0.05
CAPN9-203ENST00000366666 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
CAPN9-203ENST00000366666 GCKRQ14397 625 aa15.34■□□□□ 0.05
CAPN9-203ENST00000366666 LRRFIP2Q9Y608 721 aaKnown RBP15.34■□□□□ 0.05
CAPN9-203ENST00000366666 AAMPQ13685 434 aa15.33■□□□□ 0.04
CAPN9-203ENST00000366666 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
CAPN9-203ENST00000366666 UBE2Q2Q8WVN8 375 aa15.33■□□□□ 0.04
CAPN9-203ENST00000366666 RPS6KA4O75676 772 aa15.32■□□□□ 0.04
CAPN9-203ENST00000366666 PHF14O94880 888 aa15.32■□□□□ 0.04
CAPN9-203ENST00000366666 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
CAPN9-203ENST00000366666 GPTP24298 496 aa15.32■□□□□ 0.04
CAPN9-203ENST00000366666 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
CAPN9-203ENST00000366666 SLC27A3Q5K4L6 730 aa15.32■□□□□ 0.04
CAPN9-203ENST00000366666 GIGYF2Q6Y7W6 1299 aaKnown RBP15.32■□□□□ 0.04
CAPN9-203ENST00000366666 UBTFL1P0CB47 393 aaPredicted RBP15.32■□□□□ 0.04
CAPN9-203ENST00000366666 TCIRG1Q13488 830 aa15.32■□□□□ 0.04
CAPN9-203ENST00000366666 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
CAPN9-203ENST00000366666 C9orf78Q9NZ63 289 aaPredicted RBP15.32■□□□□ 0.04
CAPN9-203ENST00000366666 TUBGCP6Q96RT7 1819 aa15.32■□□□□ 0.04
CAPN9-203ENST00000366666 GRM8O00222 908 aa15.31■□□□□ 0.04
CAPN9-203ENST00000366666 EN1Q05925 392 aaPredicted RBP15.31■□□□□ 0.04
CAPN9-203ENST00000366666 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
CAPN9-203ENST00000366666 KAZALD1Q96I82 304 aa15.31■□□□□ 0.04
CAPN9-203ENST00000366666 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
CAPN9-203ENST00000366666 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
CAPN9-203ENST00000366666 GNAI2P04899 355 aa15.31■□□□□ 0.04
CAPN9-203ENST00000366666 GNAI3P08754 354 aa15.31■□□□□ 0.04
CAPN9-203ENST00000366666 RGPD3A6NKT7 1758 aaPredicted RBP15.3■□□□□ 0.04
CAPN9-203ENST00000366666 RGPD4Q7Z3J3 1758 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 PNMA6EA0A0J9YXQ4 647 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 EZH2Q15910 746 aaKnown RBP15.3■□□□□ 0.04
CAPN9-203ENST00000366666 ZNF827Q17R98 1081 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 UBE3BQ7Z3V4 1068 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 ARHGEF1Q92888 912 aaKnown RBP15.3■□□□□ 0.04
CAPN9-203ENST00000366666 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 AK7Q96M32 723 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 CHMP4BQ9H444 224 aaKnown RBP15.3■□□□□ 0.04
CAPN9-203ENST00000366666 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
CAPN9-203ENST00000366666 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
CAPN9-203ENST00000366666 UTYO14607 1347 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 UBN2Q6ZU65 1347 aa15.3■□□□□ 0.04
CAPN9-203ENST00000366666 A0A087WZG4 1122 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms