RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 SALL2Q9Y467 1007 aaPredicted RBP21.97■■□□□ 1.11
CKLF-204ENST00000362093 IL16Q14005 1332 aa21.97■■□□□ 1.11
CKLF-204ENST00000362093 MAP3K15Q6ZN16 1313 aa21.97■■□□□ 1.11
CKLF-204ENST00000362093 NRXN2Q9P2S2 1712 aa21.97■■□□□ 1.11
CKLF-204ENST00000362093 ANXA1P04083 346 aa21.96■■□□□ 1.11
CKLF-204ENST00000362093 WDR63Q8IWG1 891 aa21.96■■□□□ 1.11
CKLF-204ENST00000362093 DDX21Q9NR30 783 aaKnown RBP eCLIP21.96■■□□□ 1.11
CKLF-204ENST00000362093 BCORQ6W2J9 1755 aa21.96■■□□□ 1.11
CKLF-204ENST00000362093 AFDNP55196 1824 aaKnown RBP21.95■■□□□ 1.1
CKLF-204ENST00000362093 HDGFL1Q5TGJ6 251 aa21.95■■□□□ 1.1
CKLF-204ENST00000362093 C8orf58Q8NAV2 365 aa21.95■■□□□ 1.1
CKLF-204ENST00000362093 CARMIL3Q8ND23 1372 aa21.95■■□□□ 1.1
CKLF-204ENST00000362093 GRIN3BO60391 1043 aa21.94■■□□□ 1.1
CKLF-204ENST00000362093 KIF6Q6ZMV9 814 aa21.94■■□□□ 1.1
CKLF-204ENST00000362093 KIAA1551Q9HCM1 1747 aa21.94■■□□□ 1.1
CKLF-204ENST00000362093 DIEXFQ68CQ4 756 aaKnown RBP21.93■■□□□ 1.1
CKLF-204ENST00000362093 PRR5LQ6MZQ0 368 aa21.93■■□□□ 1.1
CKLF-204ENST00000362093 TSR2Q969E8 191 aaKnown RBP21.93■■□□□ 1.1
CKLF-204ENST00000362093 CHPF2Q9P2E5 772 aa21.93■■□□□ 1.1
CKLF-204ENST00000362093 NIP7Q9Y221 180 aaKnown RBP eCLIP21.93■■□□□ 1.1
CKLF-204ENST00000362093 ELL2O00472 640 aaPredicted RBP21.92■■□□□ 1.1
CKLF-204ENST00000362093 COPS6Q7L5N1 327 aa21.92■■□□□ 1.1
CKLF-204ENST00000362093 ZBTB3Q9H5J0 574 aa21.92■■□□□ 1.1
CKLF-204ENST00000362093 DBF4Q9UBU7 674 aaPredicted RBP21.92■■□□□ 1.1
CKLF-204ENST00000362093 WWC3Q9ULE0 1092 aa21.92■■□□□ 1.1
CKLF-204ENST00000362093 CHRNA5P30532 468 aa21.91■■□□□ 1.1
CKLF-204ENST00000362093 GIGYF2Q6Y7W6 1299 aaKnown RBP21.91■■□□□ 1.1
CKLF-204ENST00000362093 TSPYL6Q8N831 410 aa21.91■■□□□ 1.1
CKLF-204ENST00000362093 XAGE3Q8WTP9 111 aa21.91■■□□□ 1.1
CKLF-204ENST00000362093 N4BP2Q86UW6 1770 aaPredicted RBP21.91■■□□□ 1.1
CKLF-204ENST00000362093 BRIP1Q9BX63 1249 aa21.9■■□□□ 1.1
CKLF-204ENST00000362093 PIM2Q9P1W9 311 aa21.9■■□□□ 1.1
CKLF-204ENST00000362093 AIMP1Q12904 312 aaKnown RBP21.89■■□□□ 1.09
CKLF-204ENST00000362093 TPTE2Q6XPS3 522 aa21.89■■□□□ 1.09
CKLF-204ENST00000362093 NBPF5PQ86XG9 351 aaPredicted RBP21.89■■□□□ 1.09
CKLF-204ENST00000362093 ZNF34Q8IZ26 560 aa21.89■■□□□ 1.09
CKLF-204ENST00000362093 CCDC24Q8N4L8 307 aa21.89■■□□□ 1.09
CKLF-204ENST00000362093 CNBD1Q8NA66 436 aa21.89■■□□□ 1.09
CKLF-204ENST00000362093 YY1P25490 414 aa21.88■■□□□ 1.09
CKLF-204ENST00000362093 HYPKQ9NX55 129 aa21.88■■□□□ 1.09
CKLF-204ENST00000362093 ATP10DQ9P241 1426 aa21.88■■□□□ 1.09
CKLF-204ENST00000362093 MIER1Q8N108 512 aa21.87■■□□□ 1.09
CKLF-204ENST00000362093 SPINK5Q9NQ38 1064 aaPredicted RBP21.87■■□□□ 1.09
CKLF-204ENST00000362093 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
CKLF-204ENST00000362093 BCS1LQ9Y276 419 aa21.87■■□□□ 1.09
CKLF-204ENST00000362093 NUP98P52948 1817 aa21.87■■□□□ 1.09
CKLF-204ENST00000362093 UTRNP46939 3433 aa21.87■■□□□ 1.09
CKLF-204ENST00000362093 ZNF521Q96K83 1311 aa21.86■■□□□ 1.09
CKLF-204ENST00000362093 H0YIN7 160 aa21.86■■□□□ 1.09
CKLF-204ENST00000362093 PDE6BP35913 854 aa21.86■■□□□ 1.09
CKLF-204ENST00000362093 ST5P78524 1137 aa21.86■■□□□ 1.09
CKLF-204ENST00000362093 C2CD5Q86YS7 1000 aa21.86■■□□□ 1.09
CKLF-204ENST00000362093 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
CKLF-204ENST00000362093 GOLGB1Q14789 3259 aaKnown RBP21.86■■□□□ 1.09
CKLF-204ENST00000362093 UBN2Q6ZU65 1347 aa21.85■■□□□ 1.09
CKLF-204ENST00000362093 FANCIQ9NVI1 1328 aa21.85■■□□□ 1.09
CKLF-204ENST00000362093 NPHP1O15259 732 aa21.85■■□□□ 1.09
CKLF-204ENST00000362093 DALRD3Q5D0E6 543 aaKnown RBP21.85■■□□□ 1.09
CKLF-204ENST00000362093 CCDC30Q5VVM6 783 aa21.85■■□□□ 1.09
CKLF-204ENST00000362093 FAM177BA6PVY3 158 aa21.84■■□□□ 1.09
CKLF-204ENST00000362093 GPTP24298 496 aa21.84■■□□□ 1.09
CKLF-204ENST00000362093 TWISTNBQ3B726 338 aaPredicted RBP21.84■■□□□ 1.09
CKLF-204ENST00000362093 SUSD4Q5VX71 490 aa21.84■■□□□ 1.09
CKLF-204ENST00000362093 ANKRD13DQ6ZTN6 518 aa21.84■■□□□ 1.09
CKLF-204ENST00000362093 PLBD2Q8NHP8 589 aa21.84■■□□□ 1.09
CKLF-204ENST00000362093 BRCA1P38398 1863 aaKnown RBP21.83■■□□□ 1.09
CKLF-204ENST00000362093 GOLGA2Q08379 1002 aa21.83■■□□□ 1.09
CKLF-204ENST00000362093 TCIRG1Q13488 830 aa21.83■■□□□ 1.09
CKLF-204ENST00000362093 NYXQ9GZU5 481 aa21.83■■□□□ 1.09
CKLF-204ENST00000362093 PHAXQ9H814 394 aaKnown RBP21.83■■□□□ 1.09
CKLF-204ENST00000362093 ANKRD31Q8N7Z5 1873 aa21.83■■□□□ 1.08
CKLF-204ENST00000362093 KLRG2A4D1S0 409 aaPredicted RBP21.82■■□□□ 1.08
CKLF-204ENST00000362093 PARP10Q53GL7 1025 aa21.82■■□□□ 1.08
CKLF-204ENST00000362093 HSP90AB3PQ58FF7 597 aa21.82■■□□□ 1.08
CKLF-204ENST00000362093 VAMP4O75379 141 aa21.81■■□□□ 1.08
CKLF-204ENST00000362093 TTLL6Q8N841 843 aa21.81■■□□□ 1.08
CKLF-204ENST00000362093 CHD4Q14839 1912 aa21.8■■□□□ 1.08
CKLF-204ENST00000362093 IBTKQ9P2D0 1353 aaPredicted RBP21.8■■□□□ 1.08
CKLF-204ENST00000362093 SRGNP10124 158 aa21.8■■□□□ 1.08
CKLF-204ENST00000362093 GTF2E1P29083 439 aaPredicted RBP21.8■■□□□ 1.08
CKLF-204ENST00000362093 EXOSC9Q06265 439 aaKnown RBP21.8■■□□□ 1.08
CKLF-204ENST00000362093 PPP1R42Q7Z4L9 355 aa21.8■■□□□ 1.08
CKLF-204ENST00000362093 NUTM1Q86Y26 1132 aa21.8■■□□□ 1.08
CKLF-204ENST00000362093 MYH16Q9H6N6 1097 aa21.8■■□□□ 1.08
CKLF-204ENST00000362093 NTSR2O95665 410 aa21.79■■□□□ 1.08
CKLF-204ENST00000362093 ERFEQ4G0M1 354 aa21.79■■□□□ 1.08
CKLF-204ENST00000362093 ZNF622Q969S3 477 aaKnown RBP eCLIP21.79■■□□□ 1.08
CKLF-204ENST00000362093 STYK1Q6J9G0 422 aa21.78■■□□□ 1.08
CKLF-204ENST00000362093 ARHGAP27Q6ZUM4 889 aa21.78■■□□□ 1.08
CKLF-204ENST00000362093 NLRP10Q86W26 655 aa21.78■■□□□ 1.08
CKLF-204ENST00000362093 MASTLQ96GX5 879 aa21.78■■□□□ 1.08
CKLF-204ENST00000362093 ISCA1Q9BUE6 129 aa21.77■■□□□ 1.08
CKLF-204ENST00000362093 UTP14AQ9BVJ6 771 aaKnown RBP21.77■■□□□ 1.08
CKLF-204ENST00000362093 DLEC1Q9Y238 1755 aa21.76■■□□□ 1.07
CKLF-204ENST00000362093 TCERG1O14776 1098 aaKnown RBP21.76■■□□□ 1.07
CKLF-204ENST00000362093 SLC10A5Q5PT55 438 aa21.76■■□□□ 1.07
CKLF-204ENST00000362093 RIC3Q7Z5B4 369 aa21.76■■□□□ 1.07
CKLF-204ENST00000362093 CNKSR1Q969H4 720 aa21.76■■□□□ 1.07
CKLF-204ENST00000362093 STK31Q9BXU1 1019 aa21.76■■□□□ 1.07
CKLF-204ENST00000362093 ABCC12Q96J65 1359 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms