RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 DZIP1LQ8IYY4 767 aaKnown RBP26.25■■□□□ 1.79
SHISA4-201ENST00000362011 TNNQ9UQP3 1299 aa26.25■■□□□ 1.79
SHISA4-201ENST00000362011 CYP19A1P11511 503 aaPredicted RBP26.24■■□□□ 1.79
SHISA4-201ENST00000362011 FTSJ3Q8IY81 847 aaKnown RBP26.24■■□□□ 1.79
SHISA4-201ENST00000362011 PHAXQ9H814 394 aaKnown RBP26.24■■□□□ 1.79
SHISA4-201ENST00000362011 AFDNP55196 1824 aaKnown RBP26.24■■□□□ 1.79
SHISA4-201ENST00000362011 A1BGP04217 495 aa26.23■■□□□ 1.79
SHISA4-201ENST00000362011 MYL6BP14649 208 aa26.23■■□□□ 1.79
SHISA4-201ENST00000362011 PELP1Q8IZL8 1130 aaKnown RBP26.23■■□□□ 1.79
SHISA4-201ENST00000362011 FLAD1Q8NFF5 587 aa26.23■■□□□ 1.79
SHISA4-201ENST00000362011 CLUAP1Q96AJ1 413 aa26.23■■□□□ 1.79
SHISA4-201ENST00000362011 FKBP5Q13451 457 aaPredicted RBP26.22■■□□□ 1.79
SHISA4-201ENST00000362011 ITPK1Q13572 414 aa26.22■■□□□ 1.79
SHISA4-201ENST00000362011 C4BP0C0L5 1744 aa26.22■■□□□ 1.79
SHISA4-201ENST00000362011 PANK1Q8TE04 598 aa26.21■■□□□ 1.79
SHISA4-201ENST00000362011 CD2APQ9Y5K6 639 aa26.21■■□□□ 1.79
SHISA4-201ENST00000362011 GTF3C3Q9Y5Q9 886 aa26.21■■□□□ 1.79
SHISA4-201ENST00000362011 ABCC4O15439 1325 aa26.2■■□□□ 1.79
SHISA4-201ENST00000362011 NBPF26B4DH59 902 aa26.2■■□□□ 1.79
SHISA4-201ENST00000362011 MSH5O43196 834 aa26.2■■□□□ 1.79
SHISA4-201ENST00000362011 PIP4K2AP48426 406 aaPredicted RBP26.2■■□□□ 1.79
SHISA4-201ENST00000362011 NBPF10Q6P3W6 841 aaKnown RBP26.2■■□□□ 1.79
SHISA4-201ENST00000362011 NBPF15Q8N660 670 aa26.2■■□□□ 1.79
SHISA4-201ENST00000362011 PXDNLA1KZ92 1463 aa26.2■■□□□ 1.78
SHISA4-201ENST00000362011 ANKRD36CQ5JPF3 1778 aa26.2■■□□□ 1.78
SHISA4-201ENST00000362011 RLBP1P12271 317 aa26.19■■□□□ 1.78
SHISA4-201ENST00000362011 MSL1Q68DK7 614 aa26.19■■□□□ 1.78
SHISA4-201ENST00000362011 CRBNQ96SW2 442 aa26.19■■□□□ 1.78
SHISA4-201ENST00000362011 NUP98P52948 1817 aa26.19■■□□□ 1.78
SHISA4-201ENST00000362011 LRP10Q7Z4F1 713 aa26.18■■□□□ 1.78
SHISA4-201ENST00000362011 DDX58O95786 925 aaKnown RBP26.17■■□□□ 1.78
SHISA4-201ENST00000362011 CCDC87Q9NVE4 849 aa26.17■■□□□ 1.78
SHISA4-201ENST00000362011 CRKLP46109 303 aaKnown RBP26.16■■□□□ 1.78
SHISA4-201ENST00000362011 AIMP1Q12904 312 aaKnown RBP26.16■■□□□ 1.78
SHISA4-201ENST00000362011 ERICH6BQ5W0A0 696 aa26.16■■□□□ 1.78
SHISA4-201ENST00000362011 XAGE3Q8WTP9 111 aa26.16■■□□□ 1.78
SHISA4-201ENST00000362011 COG6Q9Y2V7 657 aa26.16■■□□□ 1.78
SHISA4-201ENST00000362011 BCORQ6W2J9 1755 aa26.16■■□□□ 1.78
SHISA4-201ENST00000362011 UBR3Q6ZT12 1888 aa26.16■■□□□ 1.78
SHISA4-201ENST00000362011 COPS6Q7L5N1 327 aa26.15■■□□□ 1.78
SHISA4-201ENST00000362011 AMIGO3Q86WK7 504 aa26.15■■□□□ 1.78
SHISA4-201ENST00000362011 TMEM57Q8N5G2 664 aa26.15■■□□□ 1.78
SHISA4-201ENST00000362011 LINC00116Q8NCU8 138 aa26.15■■□□□ 1.78
SHISA4-201ENST00000362011 ZBTB1Q9Y2K1 713 aa26.15■■□□□ 1.78
SHISA4-201ENST00000362011 CNTNAP4Q9C0A0 1308 aa26.15■■□□□ 1.78
SHISA4-201ENST00000362011 MVPQ14764 893 aaKnown RBP26.14■■□□□ 1.78
SHISA4-201ENST00000362011 EXOC6Q8TAG9 804 aa26.14■■□□□ 1.78
SHISA4-201ENST00000362011 ADCY9O60503 1353 aa26.14■■□□□ 1.78
SHISA4-201ENST00000362011 F6X3S4 739 aa26.14■■□□□ 1.77
SHISA4-201ENST00000362011 INTS5Q6P9B9 1019 aaKnown RBP26.14■■□□□ 1.77
SHISA4-201ENST00000362011 PI4KAP2A4QPH2 592 aa26.13■■□□□ 1.77
SHISA4-201ENST00000362011 IL6STP40189 918 aaPredicted RBP26.13■■□□□ 1.77
SHISA4-201ENST00000362011 KSR2Q6VAB6 950 aa26.13■■□□□ 1.77
SHISA4-201ENST00000362011 ITPRIPQ8IWB1 547 aa26.13■■□□□ 1.77
SHISA4-201ENST00000362011 PI4KAP1Q8N8J0 262 aa26.13■■□□□ 1.77
SHISA4-201ENST00000362011 C4AP0C0L4 1744 aa26.12■■□□□ 1.77
SHISA4-201ENST00000362011 INTS3Q68E01 1043 aaKnown RBP26.12■■□□□ 1.77
SHISA4-201ENST00000362011 SLC4A10Q6U841 1118 aa26.12■■□□□ 1.77
SHISA4-201ENST00000362011 DNAAF4Q8WXU2 420 aa26.12■■□□□ 1.77
SHISA4-201ENST00000362011 RC3H1Q5TC82 1133 aaKnown RBP26.11■■□□□ 1.77
SHISA4-201ENST00000362011 RIC3Q7Z5B4 369 aa26.11■■□□□ 1.77
SHISA4-201ENST00000362011 DDX19BQ9UMR2 479 aa26.11■■□□□ 1.77
SHISA4-201ENST00000362011 ZNF330Q9Y3S2 320 aaPredicted RBP26.11■■□□□ 1.77
SHISA4-201ENST00000362011 CCT4P50991 539 aaKnown RBP26.1■■□□□ 1.77
SHISA4-201ENST00000362011 NPM2Q86SE8 214 aaKnown RBP26.1■■□□□ 1.77
SHISA4-201ENST00000362011 AK7Q96M32 723 aa26.1■■□□□ 1.77
SHISA4-201ENST00000362011 MAP3K2Q9Y2U5 619 aa26.1■■□□□ 1.77
SHISA4-201ENST00000362011 ATP10DQ9P241 1426 aa26.1■■□□□ 1.77
SHISA4-201ENST00000362011 SCN7AQ01118 1682 aa26.09■■□□□ 1.77
SHISA4-201ENST00000362011 TTLL7Q6ZT98 887 aa26.09■■□□□ 1.77
SHISA4-201ENST00000362011 ANKRD13DQ6ZTN6 518 aa26.09■■□□□ 1.77
SHISA4-201ENST00000362011 PLBD2Q8NHP8 589 aa26.09■■□□□ 1.77
SHISA4-201ENST00000362011 SSFA2P28290 1259 aa26.08■■□□□ 1.77
SHISA4-201ENST00000362011 EIF5P55010 431 aaKnown RBP26.08■■□□□ 1.77
SHISA4-201ENST00000362011 KIF6Q6ZMV9 814 aa26.08■■□□□ 1.77
SHISA4-201ENST00000362011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.07■■□□□ 1.76
SHISA4-201ENST00000362011 CHMP4BQ9H444 224 aaKnown RBP26.06■■□□□ 1.76
SHISA4-201ENST00000362011 COL15A1P39059 1388 aa26.05■■□□□ 1.76
SHISA4-201ENST00000362011 RPS6KA4O75676 772 aa26.04■■□□□ 1.76
SHISA4-201ENST00000362011 AAMPQ13685 434 aa26.04■■□□□ 1.76
SHISA4-201ENST00000362011 SMIM5Q71RC9 77 aa26.04■■□□□ 1.76
SHISA4-201ENST00000362011 METTL22Q9BUU2 404 aaPredicted RBP26.04■■□□□ 1.76
SHISA4-201ENST00000362011 MAP3K15Q6ZN16 1313 aa26.04■■□□□ 1.76
SHISA4-201ENST00000362011 NEXNQ0ZGT2 675 aa26.03■■□□□ 1.76
SHISA4-201ENST00000362011 BEND3Q5T5X7 828 aa26.03■■□□□ 1.76
SHISA4-201ENST00000362011 DZIP3Q86Y13 1208 aaKnown RBP26.03■■□□□ 1.76
SHISA4-201ENST00000362011 SRCIN1Q9C0H9 1055 aa26.03■■□□□ 1.76
SHISA4-201ENST00000362011 ZBTB3Q9H5J0 574 aa26.03■■□□□ 1.76
SHISA4-201ENST00000362011 A0A087WZG4 1122 aa26.02■■□□□ 1.76
SHISA4-201ENST00000362011 GNPATO15228 680 aa26.02■■□□□ 1.76
SHISA4-201ENST00000362011 PHF14O94880 888 aa26.02■■□□□ 1.76
SHISA4-201ENST00000362011 CEP350Q5VT06 3117 aa26.01■■□□□ 1.75
SHISA4-201ENST00000362011 MYD88Q99836 296 aa26.01■■□□□ 1.75
SHISA4-201ENST00000362011 RTCBQ9Y3I0 505 aaKnown RBP26.01■■□□□ 1.75
SHISA4-201ENST00000362011 ZBTB7BO15156 539 aaPredicted RBP26■■□□□ 1.75
SHISA4-201ENST00000362011 ALDH1L1O75891 902 aa26■■□□□ 1.75
SHISA4-201ENST00000362011 LINS1Q8NG48 757 aa26■■□□□ 1.75
SHISA4-201ENST00000362011 PPP4R2Q9NY27 417 aa26■■□□□ 1.75
SHISA4-201ENST00000362011 TBC1D2BQ9UPU7 963 aa25.99■■□□□ 1.75
SHISA4-201ENST00000362011 ERVV-1B6SEH8 477 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms