RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RARSP54136 660 aaKnown RBP17.68■□□□□ 0.42
NSMCE1-201ENST00000361439 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
NSMCE1-201ENST00000361439 SSH1Q8WYL5 1049 aa17.68■□□□□ 0.42
NSMCE1-201ENST00000361439 ARXQ96QS3 562 aa17.68■□□□□ 0.42
NSMCE1-201ENST00000361439 PDGFDQ9GZP0 370 aaPredicted RBP17.68■□□□□ 0.42
NSMCE1-201ENST00000361439 FLIIQ13045 1269 aa17.67■□□□□ 0.42
NSMCE1-201ENST00000361439 HSP90AB3PQ58FF7 597 aa17.67■□□□□ 0.42
NSMCE1-201ENST00000361439 GIGYF2Q6Y7W6 1299 aaKnown RBP17.67■□□□□ 0.42
NSMCE1-201ENST00000361439 PHAXQ9H814 394 aaKnown RBP17.67■□□□□ 0.42
NSMCE1-201ENST00000361439 SRP68Q9UHB9 627 aaKnown RBP17.67■□□□□ 0.42
NSMCE1-201ENST00000361439 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
NSMCE1-201ENST00000361439 MRPL50Q8N5N7 158 aaKnown RBP17.66■□□□□ 0.42
NSMCE1-201ENST00000361439 BCL2L12Q9HB09 334 aa17.66■□□□□ 0.42
NSMCE1-201ENST00000361439 SPON1Q9HCB6 807 aa17.66■□□□□ 0.42
NSMCE1-201ENST00000361439 SMC4Q9NTJ3 1288 aa17.66■□□□□ 0.42
NSMCE1-201ENST00000361439 SCN7AQ01118 1682 aa17.66■□□□□ 0.42
NSMCE1-201ENST00000361439 PTPRCP08575 1304 aa17.66■□□□□ 0.42
NSMCE1-201ENST00000361439 POLD1P28340 1107 aa17.65■□□□□ 0.42
NSMCE1-201ENST00000361439 FKBP8Q14318 412 aa17.65■□□□□ 0.42
NSMCE1-201ENST00000361439 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
NSMCE1-201ENST00000361439 ATP10DQ9P241 1426 aa17.64■□□□□ 0.42
NSMCE1-201ENST00000361439 BCORQ6W2J9 1755 aa17.64■□□□□ 0.41
NSMCE1-201ENST00000361439 TCERG1O14776 1098 aaKnown RBP17.64■□□□□ 0.41
NSMCE1-201ENST00000361439 ZBTB7AO95365 584 aa17.64■□□□□ 0.41
NSMCE1-201ENST00000361439 TM4SF1P30408 202 aa17.64■□□□□ 0.41
NSMCE1-201ENST00000361439 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.41
NSMCE1-201ENST00000361439 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
NSMCE1-201ENST00000361439 COL24A1Q17RW2 1714 aa17.64■□□□□ 0.41
NSMCE1-201ENST00000361439 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
NSMCE1-201ENST00000361439 HLFQ16534 295 aa17.63■□□□□ 0.41
NSMCE1-201ENST00000361439 G2E3Q7L622 706 aa17.63■□□□□ 0.41
NSMCE1-201ENST00000361439 RIC3Q7Z5B4 369 aa17.63■□□□□ 0.41
NSMCE1-201ENST00000361439 SETDB2Q96T68 719 aa17.63■□□□□ 0.41
NSMCE1-201ENST00000361439 SGIP1Q9BQI5 828 aa17.63■□□□□ 0.41
NSMCE1-201ENST00000361439 ZBTB3Q9H5J0 574 aa17.63■□□□□ 0.41
NSMCE1-201ENST00000361439 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
NSMCE1-201ENST00000361439 IPO8O15397 1037 aaKnown RBP17.62■□□□□ 0.41
NSMCE1-201ENST00000361439 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
NSMCE1-201ENST00000361439 TCIRG1Q13488 830 aa17.62■□□□□ 0.41
NSMCE1-201ENST00000361439 ZNF34Q8IZ26 560 aa17.62■□□□□ 0.41
NSMCE1-201ENST00000361439 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
NSMCE1-201ENST00000361439 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
NSMCE1-201ENST00000361439 MMP10P09238 476 aa17.61■□□□□ 0.41
NSMCE1-201ENST00000361439 PTGER2P43116 358 aa17.61■□□□□ 0.41
NSMCE1-201ENST00000361439 NFIXQ14938 502 aa17.61■□□□□ 0.41
NSMCE1-201ENST00000361439 PARP10Q53GL7 1025 aa17.61■□□□□ 0.41
NSMCE1-201ENST00000361439 TBC1D9BQ66K14 1250 aa17.61■□□□□ 0.41
NSMCE1-201ENST00000361439 METTL22Q9BUU2 404 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-201ENST00000361439 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-201ENST00000361439 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
NSMCE1-201ENST00000361439 NEXNQ0ZGT2 675 aa17.6■□□□□ 0.41
NSMCE1-201ENST00000361439 MSL1Q68DK7 614 aa17.6■□□□□ 0.41
NSMCE1-201ENST00000361439 DNAAF4Q8WXU2 420 aa17.6■□□□□ 0.41
NSMCE1-201ENST00000361439 RCAN3Q9UKA8 241 aa17.6■□□□□ 0.41
NSMCE1-201ENST00000361439 NIP7Q9Y221 180 aaKnown RBP eCLIP17.6■□□□□ 0.41
NSMCE1-201ENST00000361439 MAP3K2Q9Y2U5 619 aa17.6■□□□□ 0.41
NSMCE1-201ENST00000361439 ADCY9O60503 1353 aa17.6■□□□□ 0.41
NSMCE1-201ENST00000361439 IBTKQ9P2D0 1353 aaPredicted RBP17.6■□□□□ 0.41
NSMCE1-201ENST00000361439 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
NSMCE1-201ENST00000361439 POLRMTO00411 1230 aaKnown RBP17.59■□□□□ 0.41
NSMCE1-201ENST00000361439 ISCA1Q9BUE6 129 aa17.59■□□□□ 0.41
NSMCE1-201ENST00000361439 BCL2L13Q9BXK5 485 aa17.59■□□□□ 0.41
NSMCE1-201ENST00000361439 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
NSMCE1-201ENST00000361439 PPP1R42Q7Z4L9 355 aa17.58■□□□□ 0.4
NSMCE1-201ENST00000361439 NYXQ9GZU5 481 aa17.58■□□□□ 0.4
NSMCE1-201ENST00000361439 NOB1Q9ULX3 412 aaKnown RBP17.58■□□□□ 0.4
NSMCE1-201ENST00000361439 NUP98P52948 1817 aa17.58■□□□□ 0.4
NSMCE1-201ENST00000361439 BCAR3O75815 825 aa17.57■□□□□ 0.4
NSMCE1-201ENST00000361439 TPTE2Q6XPS3 522 aa17.57■□□□□ 0.4
NSMCE1-201ENST00000361439 CCDC191Q8NCU4 936 aa17.57■□□□□ 0.4
NSMCE1-201ENST00000361439 SERPINB2P05120 415 aa17.56■□□□□ 0.4
NSMCE1-201ENST00000361439 DDR1Q08345 913 aa17.56■□□□□ 0.4
NSMCE1-201ENST00000361439 BICDL1Q6ZP65 573 aa17.56■□□□□ 0.4
NSMCE1-201ENST00000361439 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
NSMCE1-201ENST00000361439 LINS1Q8NG48 757 aa17.56■□□□□ 0.4
NSMCE1-201ENST00000361439 ARFGEF2Q9Y6D5 1785 aa17.56■□□□□ 0.4
NSMCE1-201ENST00000361439 LRP5O75197 1615 aa17.55■□□□□ 0.4
NSMCE1-201ENST00000361439 UBN2Q6ZU65 1347 aa17.55■□□□□ 0.4
NSMCE1-201ENST00000361439 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
NSMCE1-201ENST00000361439 NBPF5PQ86XG9 351 aaPredicted RBP17.55■□□□□ 0.4
NSMCE1-201ENST00000361439 MYD88Q99836 296 aa17.55■□□□□ 0.4
NSMCE1-201ENST00000361439 PXDNLA1KZ92 1463 aa17.55■□□□□ 0.4
NSMCE1-201ENST00000361439 ALDH1L1O75891 902 aa17.54■□□□□ 0.4
NSMCE1-201ENST00000361439 BEND3Q5T5X7 828 aa17.54■□□□□ 0.4
NSMCE1-201ENST00000361439 ZKSCAN2Q63HK3 967 aa17.54■□□□□ 0.4
NSMCE1-201ENST00000361439 CNBD1Q8NA66 436 aa17.54■□□□□ 0.4
NSMCE1-201ENST00000361439 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
NSMCE1-201ENST00000361439 CWC25Q9NXE8 425 aaPredicted RBP17.54■□□□□ 0.4
NSMCE1-201ENST00000361439 F6X3S4 739 aa17.53■□□□□ 0.4
NSMCE1-201ENST00000361439 IGKV5-2P06315 115 aa17.53■□□□□ 0.4
NSMCE1-201ENST00000361439 MS4A1P11836 297 aa17.53■□□□□ 0.4
NSMCE1-201ENST00000361439 HSP90B1P14625 803 aaKnown RBP17.53■□□□□ 0.4
NSMCE1-201ENST00000361439 GPTP24298 496 aa17.53■□□□□ 0.4
NSMCE1-201ENST00000361439 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
NSMCE1-201ENST00000361439 CD2APQ9Y5K6 639 aa17.53■□□□□ 0.4
NSMCE1-201ENST00000361439 ANKRD36CQ5JPF3 1778 aa17.53■□□□□ 0.4
NSMCE1-201ENST00000361439 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 NEURL1BA8MQ27 555 aa17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 NTSR2O95665 410 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms