RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 CNTNAP1P78357 1384 aa9.78□□□□□ -0.84
CCL28-201ENST00000361115 STYK1Q6J9G0 422 aa9.78□□□□□ -0.84
CCL28-201ENST00000361115 ARHGAP27Q6ZUM4 889 aa9.78□□□□□ -0.84
CCL28-201ENST00000361115 SOS1Q07889 1333 aaPredicted RBP9.77□□□□□ -0.85
CCL28-201ENST00000361115 PDE6BP35913 854 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 L1TD1Q5T7N2 865 aaKnown RBP9.77□□□□□ -0.85
CCL28-201ENST00000361115 MPRIPQ6WCQ1 1025 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 ST20-MTHFSA0A0A6YYL1 179 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 DPEP1P16444 411 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 KCNA3P22001 575 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 RGS19P49795 217 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 CC2D2BQ6DHV5 1058 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 AIDAQ96BJ3 306 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 ARID3AQ99856 593 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 SLKQ9H2G2 1235 aaPredicted RBP9.77□□□□□ -0.85
CCL28-201ENST00000361115 PNNQ9H307 717 aaKnown RBP9.77□□□□□ -0.85
CCL28-201ENST00000361115 NARFQ9UHQ1 456 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 LAMB4A4D0S4 1761 aa9.77□□□□□ -0.85
CCL28-201ENST00000361115 NPC1L1Q9UHC9 1359 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 XRCC6P12956 609 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCL28-201ENST00000361115 CHADLQ6NUI6 762 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 HSP90AA1P07900 732 aaKnown RBP9.76□□□□□ -0.85
CCL28-201ENST00000361115 HHIPL1Q96JK4 782 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 PANK2Q9BZ23 570 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 BCS1LQ9Y276 419 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 SOX12O15370 315 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 RRP9O43818 475 aaKnown RBP9.76□□□□□ -0.85
CCL28-201ENST00000361115 ITPK1Q13572 414 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 MSL1Q68DK7 614 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 LDHDQ86WU2 507 aa9.76□□□□□ -0.85
CCL28-201ENST00000361115 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
CCL28-201ENST00000361115 POLRMTO00411 1230 aaKnown RBP9.75□□□□□ -0.85
CCL28-201ENST00000361115 SEC24BO95487 1268 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 AKAP4Q5JQC9 854 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 C1orf141Q5JVX7 400 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 CNKSR1Q969H4 720 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 WWC3Q9ULE0 1092 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 CDHR2Q9BYE9 1310 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 CLCN1P35523 988 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 RNF181Q9P0P0 153 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 DDX60Q8IY21 1712 aaKnown RBP9.75□□□□□ -0.85
CCL28-201ENST00000361115 CARMIL3Q8ND23 1372 aa9.75□□□□□ -0.85
CCL28-201ENST00000361115 ANKRD31Q8N7Z5 1873 aa9.74□□□□□ -0.85
CCL28-201ENST00000361115 TTLL6Q8N841 843 aa9.74□□□□□ -0.85
CCL28-201ENST00000361115 LTV1Q96GA3 475 aaPredicted RBP9.74□□□□□ -0.85
CCL28-201ENST00000361115 MYH14Q7Z406 1995 aaKnown RBP9.74□□□□□ -0.85
CCL28-201ENST00000361115 CABP4P57796 275 aa9.74□□□□□ -0.85
CCL28-201ENST00000361115 REM2Q8IYK8 340 aaPredicted RBP9.74□□□□□ -0.85
CCL28-201ENST00000361115 ZPR1O75312 459 aa9.73□□□□□ -0.85
CCL28-201ENST00000361115 PNMA8AQ86V59 439 aaPredicted RBP9.73□□□□□ -0.85
CCL28-201ENST00000361115 COL15A1P39059 1388 aa9.73□□□□□ -0.85
CCL28-201ENST00000361115 PASKQ96RG2 1323 aa9.73□□□□□ -0.85
CCL28-201ENST00000361115 HSPA1AP0DMV8 641 aaKnown RBP9.73□□□□□ -0.85
CCL28-201ENST00000361115 HSPA1BP0DMV9 641 aaKnown RBP9.73□□□□□ -0.85
CCL28-201ENST00000361115 MAP2K1Q02750 393 aaPredicted RBP9.73□□□□□ -0.85
CCL28-201ENST00000361115 EYA1Q99502 592 aa9.73□□□□□ -0.85
CCL28-201ENST00000361115 BRIP1Q9BX63 1249 aa9.73□□□□□ -0.85
CCL28-201ENST00000361115 TRPM7Q96QT4 1865 aa9.73□□□□□ -0.85
CCL28-201ENST00000361115 COL11A2P13942 1736 aaPredicted RBP9.73□□□□□ -0.85
CCL28-201ENST00000361115 ANTXR1Q9H6X2 564 aa9.73□□□□□ -0.85
CCL28-201ENST00000361115 H0YIN7 160 aa9.72□□□□□ -0.85
CCL28-201ENST00000361115 HSP90AB2PQ58FF8 381 aa9.72□□□□□ -0.85
CCL28-201ENST00000361115 FSD2A1L4K1 749 aa9.72□□□□□ -0.85
CCL28-201ENST00000361115 NMRK2Q9NPI5 230 aa9.72□□□□□ -0.85
CCL28-201ENST00000361115 RASSF10A6NK89 507 aa9.71□□□□□ -0.85
CCL28-201ENST00000361115 ECE1P42892 770 aa9.71□□□□□ -0.85
CCL28-201ENST00000361115 CC2D1BQ5T0F9 858 aaKnown RBP9.71□□□□□ -0.85
CCL28-201ENST00000361115 GOLGA6L3A6NEY3 463 aa9.71□□□□□ -0.85
CCL28-201ENST00000361115 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.85
CCL28-201ENST00000361115 CRKLP46109 303 aaKnown RBP9.71□□□□□ -0.85
CCL28-201ENST00000361115 GZF1Q9H116 711 aaPredicted RBP9.71□□□□□ -0.85
CCL28-201ENST00000361115 DUSP27Q5VZP5 1158 aa9.71□□□□□ -0.86
CCL28-201ENST00000361115 CLEC4GQ6UXB4 293 aa9.71□□□□□ -0.86
CCL28-201ENST00000361115 CCDC88AQ3V6T2 1871 aa9.7□□□□□ -0.86
CCL28-201ENST00000361115 DUOX1Q9NRD9 1551 aa9.7□□□□□ -0.86
CCL28-201ENST00000361115 PHF14O94880 888 aa9.7□□□□□ -0.86
CCL28-201ENST00000361115 RRS1Q15050 365 aaKnown RBP9.7□□□□□ -0.86
CCL28-201ENST00000361115 POLKQ9UBT6 870 aa9.7□□□□□ -0.86
CCL28-201ENST00000361115 EIF4A2Q14240 407 aaKnown RBP9.69□□□□□ -0.86
CCL28-201ENST00000361115 RTKN2Q8IZC4 609 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 RRAGCQ9HB90 399 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 ZNF609O15014 1411 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 KLRG2A4D1S0 409 aaPredicted RBP9.69□□□□□ -0.86
CCL28-201ENST00000361115 STARD3NLO95772 234 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 IGHDP01880 384 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 IL6STP40189 918 aaPredicted RBP9.69□□□□□ -0.86
CCL28-201ENST00000361115 BECN1Q14457 450 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 SLC52A2Q9HAB3 445 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 A0A0G2JLW4 131 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 ZNF530Q6P9A1 599 aaPredicted RBP9.69□□□□□ -0.86
CCL28-201ENST00000361115 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
CCL28-201ENST00000361115 ST5P78524 1137 aa9.68□□□□□ -0.86
CCL28-201ENST00000361115 NECTIN2Q92692 538 aa9.68□□□□□ -0.86
CCL28-201ENST00000361115 FBXO3Q9UK99 471 aa9.68□□□□□ -0.86
CCL28-201ENST00000361115 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
CCL28-201ENST00000361115 ZNF652Q9Y2D9 606 aa9.68□□□□□ -0.86
CCL28-201ENST00000361115 TMEM88BA6NKF7 163 aa9.68□□□□□ -0.86
CCL28-201ENST00000361115 DDR1Q08345 913 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms