RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 SNX21Q969T3 373 aa16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 BIN1O00499 593 aa16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 LTKP29376 864 aa16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 LDHAL6AQ6ZMR3 332 aa16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 ZNF771Q7L3S4 317 aaPredicted RBP16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 POLR3DP05423 398 aaPredicted RBP16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 DDX17Q92841 729 aaKnown RBP16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 SAMD9LQ8IVG5 1584 aa16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 CHMLP26374 656 aa16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 CCDC183Q5T5S1 534 aa16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 IQSEC3Q9UPP2 1182 aaPredicted RBP16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 KSR2Q6VAB6 950 aa16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 CTNNA3Q9UI47 895 aa16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 YEATS2Q9ULM3 1422 aa16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 SNRPA1P09661 255 aaKnown RBP16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
PCMTD1-201ENST00000360540 USP48Q86UV5 1035 aa16.58■□□□□ 0.25
PCMTD1-201ENST00000360540 TRIM22Q8IYM9 498 aa16.58■□□□□ 0.25
PCMTD1-201ENST00000360540 NACAP1Q9BZK3 213 aa16.58■□□□□ 0.25
PCMTD1-201ENST00000360540 ERVK-7P63135 1459 aa16.58■□□□□ 0.25
PCMTD1-201ENST00000360540 XBP1P17861 261 aa16.58■□□□□ 0.24
PCMTD1-201ENST00000360540 HSPA2P54652 639 aa16.58■□□□□ 0.24
PCMTD1-201ENST00000360540 DNM1Q05193 864 aaKnown RBP16.58■□□□□ 0.24
PCMTD1-201ENST00000360540 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
PCMTD1-201ENST00000360540 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.24
PCMTD1-201ENST00000360540 SH2B1Q9NRF2 756 aaPredicted RBP16.58■□□□□ 0.24
PCMTD1-201ENST00000360540 KCNQ3O43525 872 aa16.57■□□□□ 0.24
PCMTD1-201ENST00000360540 IPO7O95373 1038 aaKnown RBP16.57■□□□□ 0.24
PCMTD1-201ENST00000360540 AK2P54819 239 aa16.57■□□□□ 0.24
PCMTD1-201ENST00000360540 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
PCMTD1-201ENST00000360540 UBAC1Q9BSL1 405 aa16.57■□□□□ 0.24
PCMTD1-201ENST00000360540 USP19O94966 1318 aa16.57■□□□□ 0.24
PCMTD1-201ENST00000360540 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 TRIM34Q9BYJ4 488 aa16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 BRMS1Q9HCU9 246 aa16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 SCAND2PQ9GZW5 306 aaPredicted RBP16.56■□□□□ 0.24
PCMTD1-201ENST00000360540 ADCY5O95622 1261 aa16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 GSPT1P15170 499 aaKnown RBP16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 NBPF6Q5VWK0 638 aa16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 MICU3Q86XE3 530 aa16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 NBPF4Q96M43 638 aa16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 SOS1Q07889 1333 aaPredicted RBP16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 LINS1Q8NG48 757 aa16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 A0A0U1RQG5 324 aaPredicted RBP16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 CEP57L1Q8IYX8 460 aa16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 NAPBQ9H115 298 aa16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 ABCA8O94911 1581 aa16.55■□□□□ 0.24
PCMTD1-201ENST00000360540 ZNF213O14771 459 aa16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 TPM2P07951 284 aa16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 ZSCAN22P10073 491 aaPredicted RBP16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 RBM25P49756 843 aaKnown RBP16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 JMYQ8N9B5 988 aa16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 BICC1Q9H694 974 aaKnown RBP16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 IKQ13123 557 aaPredicted RBP16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 BCORL1Q5H9F3 1711 aa16.54■□□□□ 0.24
PCMTD1-201ENST00000360540 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 TIMM10P62072 90 aa16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 PKP1Q13835 747 aa16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 GNL3LQ9NVN8 582 aaKnown RBP16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 TRMT1Q9NXH9 659 aaKnown RBP16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 KLHL10Q6JEL2 608 aa16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 GOLGA6L1Q8N7Z2 621 aa16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 NAP1L1P55209 391 aaKnown RBP16.53■□□□□ 0.24
PCMTD1-201ENST00000360540 ZSCAN25Q6NSZ9 544 aa16.52■□□□□ 0.24
PCMTD1-201ENST00000360540 FSIP1Q8NA03 581 aa16.52■□□□□ 0.24
PCMTD1-201ENST00000360540 TTC12Q9H892 705 aaPredicted RBP16.52■□□□□ 0.24
PCMTD1-201ENST00000360540 AKAP2Q9Y2D5 859 aa16.52■□□□□ 0.24
PCMTD1-201ENST00000360540 HMGN5P82970 282 aaKnown RBP16.52■□□□□ 0.24
PCMTD1-201ENST00000360540 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
PCMTD1-201ENST00000360540 IL17REQ8NFR9 667 aa16.52■□□□□ 0.23
PCMTD1-201ENST00000360540 ADGBQ8N7X0 1667 aa16.52■□□□□ 0.23
PCMTD1-201ENST00000360540 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 CFAP100Q494V2 611 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 CCDC129Q6ZRS4 1044 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 CCDC112Q8NEF3 446 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 CCDC47Q96A33 483 aaKnown RBP16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 C16orf45Q96MC5 204 aaPredicted RBP16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 HSP90AA4PQ58FG1 418 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 ZNF165P49910 485 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 TFCP2Q12800 502 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 IP6K1Q92551 441 aa16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 ORC3Q9UBD5 711 aaPredicted RBP16.51■□□□□ 0.23
PCMTD1-201ENST00000360540 RANBP6O60518 1105 aaKnown RBP16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
PCMTD1-201ENST00000360540 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms