RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 CATIPQ7Z7H3 387 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 INSRP06213 1382 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 KDM5DQ9BY66 1539 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 HSP90AB2PQ58FF8 381 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 DCAF5Q96JK2 942 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 POLKQ9UBT6 870 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 LIMCH1Q9UPQ0 1083 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 IP6K1Q92551 441 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 NUP62CLQ9H1M0 184 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PCDH11XQ9BZA7 1347 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PCDH11YQ9BZA8 1340 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 F6X3S4 739 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 EIF4A2Q14240 407 aaKnown RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 HSP90B2PQ58FF3 399 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 SLC12A7Q9Y666 1083 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PREX2Q70Z35 1606 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 GRM8O00222 908 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PDE4CQ08493 712 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 DDB1Q16531 1140 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 TMTC2Q8N394 836 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 TESK2Q96S53 571 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PPP1R12BO60237 982 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 DESP17661 470 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 CEBPZQ03701 1054 aaKnown RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 HSP90AA2PQ14568 343 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 SETDB2Q96T68 719 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 ARHGEF10O15013 1369 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 MINDY4BA8MYZ0 360 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 MPHOSPH10O00566 681 aaKnown RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 KIF20AO95235 890 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 FGFR1OPO95684 399 aaKnown RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 UBE3BQ7Z3V4 1068 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 A0A1W2PP64 1363 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 SBNO1A3KN83 1393 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 CAGE1Q8TC20 777 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 C8orf76Q96K31 380 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 TNNT3P45378 269 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC85AQ96PX6 553 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 MAP7D2Q96T17 732 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 GCP02774 474 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 HLA-DOAP06340 250 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 KCNA6P17658 529 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 IL15P40933 162 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 SSRP1Q08945 709 aaKnown RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CUL5Q93034 780 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ZBTB3Q9H5J0 574 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 HOXB7P09629 217 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ANAPC15P60006 121 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NUCB1Q02818 461 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 MAP3K11Q16584 847 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 TMEM266Q2M3C6 531 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 PRPF40BQ6NWY9 871 aaKnown RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 IQCEQ6IPM2 695 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NLRP3Q96P20 1036 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC8Q9H0W5 538 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CNNM2Q9H8M5 875 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 UBAP1LF5GYI3 381 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 MYO1BO43795 1136 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 MCM4P33991 863 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ZNF397Q8NF99 534 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CRNKL1Q9BZJ0 848 aaKnown RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ERLIN2O94905 339 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ATP6V1AP38606 617 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ZFYVE27Q5T4F4 411 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NBPF6Q5VWK0 638 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NBPF5PQ86XG9 351 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NBPF4Q96M43 638 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 TTC41PQ6P2S7 1318 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 TSPOAP1O95153 1857 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ZCCHC11Q5TAX3 1644 aaKnown RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 TTC22Q5TAA0 569 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ANKRD18AQ8IVF6 992 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ANKRD44Q8N8A2 993 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 LINS1Q8NG48 757 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 KRT23Q9C075 422 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 CAVIN2O95810 425 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 MRPL50Q8N5N7 158 aaKnown RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 NCOA7Q8NI08 942 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 CHPF2Q9P2E5 772 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 IFIT3O14879 490 aaKnown RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 GPTP24298 496 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 UPF3BQ9BZI7 483 aaKnown RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 GNAT2P19087 354 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ATP8B2P98198 1209 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 KANK3Q6NY19 840 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 STK11IPQ8N1F8 1099 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 DEF6Q9H4E7 631 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 FAM83GA6ND36 823 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 SMARCA5O60264 1052 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 CHRNA2Q15822 529 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 MFSD6Q6ZSS7 791 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 RHPN1Q8TCX5 695 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ZSCAN16Q9H4T2 348 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 HECW2Q9P2P5 1572 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 C6orf229H3BNL8 230 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 PPP4R3AQ6IN85 833 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 MPHOSPH6Q99547 160 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms