RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
GTF3C2-202ENST00000359541 EVI5LQ96CN4 794 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 RAD50Q92878 1312 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 PLEKHG2Q9H7P9 1386 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 SGSM2O43147 1006 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 MAP4K4O95819 1239 aaPredicted RBP11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 AACSQ86V21 672 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 HSPA4P34932 840 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 DCAF5Q96JK2 942 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 ZMYND15Q9H091 742 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
GTF3C2-202ENST00000359541 SNRPA1P09661 255 aaKnown RBP11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 CWC27Q6UX04 472 aaKnown RBP11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 ZGPATQ8N5A5 531 aaKnown RBP11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 PI4K2BQ8TCG2 481 aa11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 WDR33Q9C0J8 1336 aaKnown RBP11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 DCCP43146 1447 aa11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 LMTK3Q96Q04 1460 aa11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 USP42Q9H9J4 1324 aaKnown RBP11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 PXDNQ92626 1479 aa11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 AXIN2Q9Y2T1 843 aa11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
GTF3C2-202ENST00000359541 MYL6BP14649 208 aa11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 PHKG2P15735 406 aa11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 CABP4P57796 275 aa11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 CWF19L2Q2TBE0 894 aaKnown RBP11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 UPF3BQ9BZI7 483 aaKnown RBP11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 PRPF40AO75400 957 aaKnown RBP11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 CYP2E1P05181 493 aaPredicted RBP11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 CUL4AQ13619 759 aa11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 UNC5CLQ8IV45 518 aa11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 TMEM94Q12767 1356 aa11.21□□□□□ -0.61
GTF3C2-202ENST00000359541 PHF14O94880 888 aa11.21□□□□□ -0.62
GTF3C2-202ENST00000359541 CAVIN1Q6NZI2 390 aaKnown RBP11.21□□□□□ -0.62
GTF3C2-202ENST00000359541 HEG1Q9ULI3 1381 aa11.2□□□□□ -0.62
GTF3C2-202ENST00000359541 NASPP49321 788 aaPredicted RBP11.2□□□□□ -0.62
GTF3C2-202ENST00000359541 CSPP1Q1MSJ5 1256 aa11.2□□□□□ -0.62
GTF3C2-202ENST00000359541 PROSER3Q2NL68 480 aa11.2□□□□□ -0.62
GTF3C2-202ENST00000359541 MST1RQ04912 1400 aa11.2□□□□□ -0.62
GTF3C2-202ENST00000359541 NFATC2IPQ8NCF5 419 aa11.2□□□□□ -0.62
GTF3C2-202ENST00000359541 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
GTF3C2-202ENST00000359541 PSMA5P28066 241 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 CCDC173Q0VFZ6 552 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 ANKRD13DQ6ZTN6 518 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 XAGE3Q8WTP9 111 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 MYD88Q99836 296 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 SLC39A6Q13433 755 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 IL17RAQ96F46 866 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 METTL22Q9BUU2 404 aaPredicted RBP11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 LIMCH1Q9UPQ0 1083 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 SMC3Q9UQE7 1217 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 FOXD4L5Q5VV16 416 aaPredicted RBP11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 COPS6Q7L5N1 327 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 FOXD4L4Q8WXT5 416 aaPredicted RBP11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 SUCLG2Q96I99 432 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 FSD1Q9BTV5 496 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 CYP46A1Q9Y6A2 500 aa11.19□□□□□ -0.62
GTF3C2-202ENST00000359541 UTYO14607 1347 aa11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 LMBRD1Q9NUN5 540 aa11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 PA2G4Q9UQ80 394 aaKnown RBP11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 PANK2Q9BZ23 570 aa11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 SH2B1Q9NRF2 756 aaPredicted RBP11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 BRD1O95696 1058 aa11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 ZNF445P59923 1031 aa11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 SNX14Q9Y5W7 946 aa11.18□□□□□ -0.62
GTF3C2-202ENST00000359541 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 CASTP20810 708 aaKnown RBP11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 GCKRQ14397 625 aa11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 LSG1Q9H089 658 aaKnown RBP11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 SIL1Q9H173 461 aa11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 ZNF496Q96IT1 587 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 RRAGDQ9NQL2 400 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 PDRG1Q9NUG6 133 aa11.17□□□□□ -0.62
GTF3C2-202ENST00000359541 PRAMEF22A3QJZ6 481 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 PKP1Q13835 747 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 ANKRD1Q15327 319 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 CHRNA2Q15822 529 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 ZSCAN23Q3MJ62 389 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 JAKMIP1Q96N16 626 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 ZNF330Q9Y3S2 320 aaPredicted RBP11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 TRPM3Q9HCF6 1732 aaPredicted RBP11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 TM6SF1Q9BZW5 370 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 RGPD2P0DJD1 1756 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 PRPF40BQ6NWY9 871 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 CCDC8Q9H0W5 538 aaPredicted RBP11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 CAMTA1Q9Y6Y1 1673 aa11.16□□□□□ -0.62
GTF3C2-202ENST00000359541 ABCC6O95255 1503 aa11.15□□□□□ -0.62
GTF3C2-202ENST00000359541 VPS53Q5VIR6 699 aa11.15□□□□□ -0.62
GTF3C2-202ENST00000359541 CCDC171Q6TFL3 1326 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms