RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
TMC3-201ENST00000359440 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
TMC3-201ENST00000359440 ESCO1Q5FWF5 840 aa13.18□□□□□ -0.3
TMC3-201ENST00000359440 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
TMC3-201ENST00000359440 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
TMC3-201ENST00000359440 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
TMC3-201ENST00000359440 ABCC1P33527 1531 aa13.18□□□□□ -0.3
TMC3-201ENST00000359440 NPATQ14207 1427 aa13.18□□□□□ -0.3
TMC3-201ENST00000359440 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
TMC3-201ENST00000359440 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
TMC3-201ENST00000359440 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
TMC3-201ENST00000359440 ZGPATQ8N5A5 531 aaKnown RBP13.17□□□□□ -0.3
TMC3-201ENST00000359440 SRRTQ9BXP5 876 aaKnown RBP13.17□□□□□ -0.3
TMC3-201ENST00000359440 POGZQ7Z3K3 1410 aa13.17□□□□□ -0.3
TMC3-201ENST00000359440 ATF3P18847 181 aa13.17□□□□□ -0.3
TMC3-201ENST00000359440 ATL3Q6DD88 541 aa13.17□□□□□ -0.3
TMC3-201ENST00000359440 TTC37Q6PGP7 1564 aa13.17□□□□□ -0.3
TMC3-201ENST00000359440 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
TMC3-201ENST00000359440 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
TMC3-201ENST00000359440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.17□□□□□ -0.3
TMC3-201ENST00000359440 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
TMC3-201ENST00000359440 CABP4P57796 275 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 MAP9Q49MG5 647 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 TSPYL6Q8N831 410 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 ANTXR1Q9H6X2 564 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 H0YHG0 523 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 NAP1L1P55209 391 aaKnown RBP13.16□□□□□ -0.3
TMC3-201ENST00000359440 PHAXQ9H814 394 aaKnown RBP13.16□□□□□ -0.3
TMC3-201ENST00000359440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
TMC3-201ENST00000359440 SSH2Q76I76 1423 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 CLSTN1O94985 981 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 C16orf71Q8IYS4 520 aaPredicted RBP13.16□□□□□ -0.3
TMC3-201ENST00000359440 KIF5CO60282 957 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
TMC3-201ENST00000359440 GNL3LQ9NVN8 582 aaKnown RBP13.16□□□□□ -0.3
TMC3-201ENST00000359440 URI1O94763 535 aaPredicted RBP13.15□□□□□ -0.3
TMC3-201ENST00000359440 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
TMC3-201ENST00000359440 TFIP11Q9UBB9 837 aaKnown RBP13.15□□□□□ -0.3
TMC3-201ENST00000359440 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.3
TMC3-201ENST00000359440 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
TMC3-201ENST00000359440 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
TMC3-201ENST00000359440 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
TMC3-201ENST00000359440 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
TMC3-201ENST00000359440 CASQ1P31415 396 aa13.15□□□□□ -0.3
TMC3-201ENST00000359440 TUBB4BP68371 445 aa13.15□□□□□ -0.3
TMC3-201ENST00000359440 TYRO3Q06418 890 aa13.15□□□□□ -0.3
TMC3-201ENST00000359440 JAKMIP3Q5VZ66 844 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 PRDM10Q9NQV6 1147 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 RIMS2Q9UQ26 1411 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 ABCC4O15439 1325 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 FKBP4Q02790 459 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMC3-201ENST00000359440 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
TMC3-201ENST00000359440 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
TMC3-201ENST00000359440 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 MYL6BP14649 208 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 MYRIPQ8NFW9 859 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 FAM107BQ9H098 131 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 TTC12Q9H892 705 aaPredicted RBP13.14□□□□□ -0.31
TMC3-201ENST00000359440 PI4KAP2A4QPH2 592 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 KANK3Q6NY19 840 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 PI4KAP1Q8N8J0 262 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 CCDC8Q9H0W5 538 aaPredicted RBP13.14□□□□□ -0.31
TMC3-201ENST00000359440 DACT1Q9NYF0 836 aa13.14□□□□□ -0.31
TMC3-201ENST00000359440 KIAA0232Q92628 1395 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 ACEP12821 1306 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
TMC3-201ENST00000359440 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
TMC3-201ENST00000359440 ATP10AO60312 1499 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 MYOM2P54296 1465 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
TMC3-201ENST00000359440 RDXP35241 583 aaKnown RBP13.13□□□□□ -0.31
TMC3-201ENST00000359440 FAM177A1Q8N128 213 aaPredicted RBP13.13□□□□□ -0.31
TMC3-201ENST00000359440 SLC26A8Q96RN1 970 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 DNAJC5BQ9UF47 199 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 FLT4P35916 1363 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 SKILP12757 684 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 AK2P54819 239 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 DNM1Q05193 864 aaKnown RBP13.13□□□□□ -0.31
TMC3-201ENST00000359440 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 PHACTR3Q96KR7 559 aa13.13□□□□□ -0.31
TMC3-201ENST00000359440 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
TMC3-201ENST00000359440 KIAA0754O94854 1291 aa13.12□□□□□ -0.31
TMC3-201ENST00000359440 SYT1P21579 422 aa13.12□□□□□ -0.31
TMC3-201ENST00000359440 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
TMC3-201ENST00000359440 PYM1Q9BRP8 204 aaKnown RBP13.12□□□□□ -0.31
TMC3-201ENST00000359440 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
TMC3-201ENST00000359440 SLU7O95391 586 aaKnown RBP13.12□□□□□ -0.31
TMC3-201ENST00000359440 BRD1O95696 1058 aa13.12□□□□□ -0.31
TMC3-201ENST00000359440 EPS15P42566 896 aa13.12□□□□□ -0.31
TMC3-201ENST00000359440 TMC6Q7Z403 805 aa13.12□□□□□ -0.31
TMC3-201ENST00000359440 ZNF397Q8NF99 534 aaPredicted RBP13.12□□□□□ -0.31
TMC3-201ENST00000359440 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
TMC3-201ENST00000359440 TRPM2O94759 1503 aa13.11□□□□□ -0.31
TMC3-201ENST00000359440 GOLGA6L10A6NI86 522 aa13.11□□□□□ -0.31
TMC3-201ENST00000359440 RRP12Q5JTH9 1297 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms