RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 KCNJ4P48050 445 aa24.64■■□□□ 1.54
COL13A1-202ENST00000357811 LRRC37A3O60309 1634 aa24.64■■□□□ 1.54
COL13A1-202ENST00000357811 WDR33Q9C0J8 1336 aaKnown RBP24.64■■□□□ 1.53
COL13A1-202ENST00000357811 NECAB1Q8N987 351 aa24.63■■□□□ 1.53
COL13A1-202ENST00000357811 ANKRD24Q8TF21 1146 aa24.63■■□□□ 1.53
COL13A1-202ENST00000357811 FAM227BQ96M60 508 aa24.63■■□□□ 1.53
COL13A1-202ENST00000357811 AOX1Q06278 1338 aa24.63■■□□□ 1.53
COL13A1-202ENST00000357811 TCHHQ07283 1943 aa24.63■■□□□ 1.53
COL13A1-202ENST00000357811 GIGYF1O75420 1035 aaPredicted RBP24.63■■□□□ 1.53
COL13A1-202ENST00000357811 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
COL13A1-202ENST00000357811 TLR7Q9NYK1 1049 aaKnown RBP24.63■■□□□ 1.53
COL13A1-202ENST00000357811 ANKARQ7Z5J8 1434 aa24.63■■□□□ 1.53
COL13A1-202ENST00000357811 GLRX3O76003 335 aaKnown RBP24.63■■□□□ 1.53
COL13A1-202ENST00000357811 SYT1P21579 422 aa24.63■■□□□ 1.53
COL13A1-202ENST00000357811 CCDC9Q9Y3X0 531 aaKnown RBP24.63■■□□□ 1.53
COL13A1-202ENST00000357811 SMC3Q9UQE7 1217 aa24.62■■□□□ 1.53
COL13A1-202ENST00000357811 SUCLG2Q96I99 432 aa24.62■■□□□ 1.53
COL13A1-202ENST00000357811 PXDNQ92626 1479 aa24.61■■□□□ 1.53
COL13A1-202ENST00000357811 TTC14Q96N46 770 aa24.61■■□□□ 1.53
COL13A1-202ENST00000357811 BOLA2Q9H3K6 86 aa24.61■■□□□ 1.53
COL13A1-202ENST00000357811 TSPY26PQ9H489 355 aa24.61■■□□□ 1.53
COL13A1-202ENST00000357811 BICC1Q9H694 974 aaKnown RBP24.61■■□□□ 1.53
COL13A1-202ENST00000357811 ECHDC1Q9NTX5 307 aa24.61■■□□□ 1.53
COL13A1-202ENST00000357811 LIMCH1Q9UPQ0 1083 aa24.61■■□□□ 1.53
COL13A1-202ENST00000357811 CHMP3Q9Y3E7 222 aa24.61■■□□□ 1.53
COL13A1-202ENST00000357811 RPAP1Q9BWH6 1393 aaPredicted RBP24.61■■□□□ 1.53
COL13A1-202ENST00000357811 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.61■■□□□ 1.53
COL13A1-202ENST00000357811 PTMAP06454 111 aaKnown RBP24.6■■□□□ 1.53
COL13A1-202ENST00000357811 PLCB2Q00722 1185 aa24.6■■□□□ 1.53
COL13A1-202ENST00000357811 EDC3Q96F86 508 aaKnown RBP24.6■■□□□ 1.53
COL13A1-202ENST00000357811 R3HCC1Q9Y3T6 440 aaKnown RBP24.6■■□□□ 1.53
COL13A1-202ENST00000357811 NDUFB9Q9Y6M9 179 aa24.6■■□□□ 1.53
COL13A1-202ENST00000357811 HSP90AB4PQ58FF6 505 aa24.6■■□□□ 1.53
COL13A1-202ENST00000357811 KSR2Q6VAB6 950 aa24.6■■□□□ 1.53
COL13A1-202ENST00000357811 ANKLE2Q86XL3 938 aa24.6■■□□□ 1.53
COL13A1-202ENST00000357811 MARF1Q9Y4F3 1742 aaKnown RBP24.59■■□□□ 1.53
COL13A1-202ENST00000357811 VPS37CA5D8V6 355 aaPredicted RBP24.59■■□□□ 1.53
COL13A1-202ENST00000357811 STX6O43752 255 aa24.59■■□□□ 1.53
COL13A1-202ENST00000357811 PXDNLA1KZ92 1463 aa24.59■■□□□ 1.53
COL13A1-202ENST00000357811 KCNH5Q8NCM2 988 aa24.59■■□□□ 1.53
COL13A1-202ENST00000357811 EAF2Q96CJ1 260 aaPredicted RBP24.59■■□□□ 1.53
COL13A1-202ENST00000357811 PDLIM2Q96JY6 352 aa24.59■■□□□ 1.53
COL13A1-202ENST00000357811 TUBGCP6Q96RT7 1819 aa24.58■■□□□ 1.53
COL13A1-202ENST00000357811 PDRG1Q9NUG6 133 aa24.58■■□□□ 1.53
COL13A1-202ENST00000357811 ZSCAN22P10073 491 aaPredicted RBP24.58■■□□□ 1.53
COL13A1-202ENST00000357811 RGPD2P0DJD1 1756 aa24.58■■□□□ 1.53
COL13A1-202ENST00000357811 LTN1O94822 1766 aa24.58■■□□□ 1.52
COL13A1-202ENST00000357811 GJB2P29033 226 aa24.57■■□□□ 1.52
COL13A1-202ENST00000357811 KAZALD1Q96I82 304 aa24.57■■□□□ 1.52
COL13A1-202ENST00000357811 RIC3Q7Z5B4 369 aa24.57■■□□□ 1.52
COL13A1-202ENST00000357811 FERMT3Q86UX7 667 aa24.57■■□□□ 1.52
COL13A1-202ENST00000357811 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
COL13A1-202ENST00000357811 ZNF830Q96NB3 372 aaPredicted RBP24.57■■□□□ 1.52
COL13A1-202ENST00000357811 SASH1O94885 1247 aa24.57■■□□□ 1.52
COL13A1-202ENST00000357811 HYPKQ9NX55 129 aa24.57■■□□□ 1.52
COL13A1-202ENST00000357811 TAF6LQ9Y6J9 622 aa24.57■■□□□ 1.52
COL13A1-202ENST00000357811 DNM1Q05193 864 aaKnown RBP24.56■■□□□ 1.52
COL13A1-202ENST00000357811 FAM173BQ6P4H8 233 aa24.56■■□□□ 1.52
COL13A1-202ENST00000357811 CACNA1FO60840 1977 aa24.56■■□□□ 1.52
COL13A1-202ENST00000357811 GRM8O00222 908 aa24.56■■□□□ 1.52
COL13A1-202ENST00000357811 G3BP1Q13283 466 aaKnown RBP eCLIP24.56■■□□□ 1.52
COL13A1-202ENST00000357811 CHGBP05060 677 aa24.55■■□□□ 1.52
COL13A1-202ENST00000357811 HOXB7P09629 217 aa24.55■■□□□ 1.52
COL13A1-202ENST00000357811 NMIQ13287 307 aaPredicted RBP24.55■■□□□ 1.52
COL13A1-202ENST00000357811 ARHGEF25Q86VW2 580 aa24.55■■□□□ 1.52
COL13A1-202ENST00000357811 NOL7Q9UMY1 257 aaKnown RBP24.55■■□□□ 1.52
COL13A1-202ENST00000357811 SYAP1Q96A49 352 aaPredicted RBP24.55■■□□□ 1.52
COL13A1-202ENST00000357811 USP25Q9UHP3 1055 aa24.55■■□□□ 1.52
COL13A1-202ENST00000357811 HCLS1P14317 486 aaPredicted RBP24.54■■□□□ 1.52
COL13A1-202ENST00000357811 RBM8AQ9Y5S9 174 aaKnown RBP24.54■■□□□ 1.52
COL13A1-202ENST00000357811 RUFY2Q8WXA3 655 aa24.54■■□□□ 1.52
COL13A1-202ENST00000357811 GPATCH3Q96I76 525 aa24.54■■□□□ 1.52
COL13A1-202ENST00000357811 NLRP2Q9NX02 1062 aa24.54■■□□□ 1.52
COL13A1-202ENST00000357811 RBM10P98175 930 aaKnown RBP24.54■■□□□ 1.52
COL13A1-202ENST00000357811 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.54■■□□□ 1.52
COL13A1-202ENST00000357811 TTC41PQ6P2S7 1318 aa24.53■■□□□ 1.52
COL13A1-202ENST00000357811 AMOTQ4VCS5 1084 aa24.53■■□□□ 1.52
COL13A1-202ENST00000357811 FSD1Q9BTV5 496 aa24.53■■□□□ 1.52
COL13A1-202ENST00000357811 CYP46A1Q9Y6A2 500 aa24.53■■□□□ 1.52
COL13A1-202ENST00000357811 STK3Q13188 491 aa24.53■■□□□ 1.52
COL13A1-202ENST00000357811 ME3Q16798 604 aa24.53■■□□□ 1.52
COL13A1-202ENST00000357811 GIMAP6Q6P9H5 292 aa24.53■■□□□ 1.52
COL13A1-202ENST00000357811 A0A0D9SFI3 127 aa24.52■■□□□ 1.52
COL13A1-202ENST00000357811 F13A1P00488 732 aa24.52■■□□□ 1.52
COL13A1-202ENST00000357811 NFATC2IPQ8NCF5 419 aa24.52■■□□□ 1.52
COL13A1-202ENST00000357811 OFD1O75665 1012 aa24.52■■□□□ 1.52
COL13A1-202ENST00000357811 EPHA10Q5JZY3 1008 aa24.52■■□□□ 1.52
COL13A1-202ENST00000357811 IGKV5-2P06315 115 aa24.51■■□□□ 1.51
COL13A1-202ENST00000357811 MYD88Q99836 296 aa24.51■■□□□ 1.51
COL13A1-202ENST00000357811 ZKSCAN5Q9Y2L8 839 aa24.51■■□□□ 1.51
COL13A1-202ENST00000357811 ST3GAL1Q11201 340 aa24.51■■□□□ 1.51
COL13A1-202ENST00000357811 LINS1Q8NG48 757 aa24.51■■□□□ 1.51
COL13A1-202ENST00000357811 FER1L4A9Z1Z3 1794 aa24.5■■□□□ 1.51
COL13A1-202ENST00000357811 RRP9O43818 475 aaKnown RBP24.5■■□□□ 1.51
COL13A1-202ENST00000357811 ALDH1L1O75891 902 aa24.5■■□□□ 1.51
COL13A1-202ENST00000357811 CREB3L3Q68CJ9 461 aa24.5■■□□□ 1.51
COL13A1-202ENST00000357811 COPS6Q7L5N1 327 aa24.5■■□□□ 1.51
COL13A1-202ENST00000357811 XAGE3Q8WTP9 111 aa24.5■■□□□ 1.51
COL13A1-202ENST00000357811 TPCN1Q9ULQ1 816 aa24.5■■□□□ 1.51
COL13A1-202ENST00000357811 CCDC171Q6TFL3 1326 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms