RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 RBM42Q9BTD8 480 aaKnown RBP31.99■■■□□ 2.71
C1orf228-201ENST00000357508 HSP90AB4PQ58FF6 505 aa31.98■■■□□ 2.71
C1orf228-201ENST00000357508 ARFGEF2Q9Y6D5 1785 aa31.98■■■□□ 2.71
C1orf228-201ENST00000357508 AFDNP55196 1824 aaKnown RBP31.97■■■□□ 2.71
C1orf228-201ENST00000357508 SPATA31A6Q5VVP1 1343 aa31.97■■■□□ 2.71
C1orf228-201ENST00000357508 ERC2O15083 957 aa31.97■■■□□ 2.71
C1orf228-201ENST00000357508 REC8O95072 547 aa31.97■■■□□ 2.71
C1orf228-201ENST00000357508 CD2BP2O95400 341 aaKnown RBP31.97■■■□□ 2.71
C1orf228-201ENST00000357508 IGKV5-2P06315 115 aa31.97■■■□□ 2.71
C1orf228-201ENST00000357508 COPS6Q7L5N1 327 aa31.97■■■□□ 2.71
C1orf228-201ENST00000357508 C8orf37Q96NL8 207 aa31.96■■■□□ 2.71
C1orf228-201ENST00000357508 DISP2A7MBM2 1401 aa31.96■■■□□ 2.71
C1orf228-201ENST00000357508 NUTM1Q86Y26 1132 aa31.96■■■□□ 2.71
C1orf228-201ENST00000357508 DDX54Q8TDD1 881 aaKnown RBP31.95■■■□□ 2.71
C1orf228-201ENST00000357508 SUCLG2Q96I99 432 aa31.94■■■□□ 2.7
C1orf228-201ENST00000357508 CHMP5Q9NZZ3 219 aa31.94■■■□□ 2.7
C1orf228-201ENST00000357508 LRP6O75581 1613 aa31.94■■■□□ 2.7
C1orf228-201ENST00000357508 SPATA31A1Q5TZJ5 1347 aa31.94■■■□□ 2.7
C1orf228-201ENST00000357508 NKX1-1Q15270 411 aaPredicted RBP31.93■■■□□ 2.7
C1orf228-201ENST00000357508 KAZALD1Q96I82 304 aa31.93■■■□□ 2.7
C1orf228-201ENST00000357508 NGLY1Q96IV0 654 aa31.93■■■□□ 2.7
C1orf228-201ENST00000357508 METTL22Q9BUU2 404 aaPredicted RBP31.93■■■□□ 2.7
C1orf228-201ENST00000357508 NWD2Q9ULI1 1742 aa31.93■■■□□ 2.7
C1orf228-201ENST00000357508 NEXNQ0ZGT2 675 aa31.93■■■□□ 2.7
C1orf228-201ENST00000357508 RABEP1Q15276 862 aa31.93■■■□□ 2.7
C1orf228-201ENST00000357508 NEURL1BA8MQ27 555 aa31.92■■■□□ 2.7
C1orf228-201ENST00000357508 TRIM6-TRIM34B2RNG4 842 aa31.92■■■□□ 2.7
C1orf228-201ENST00000357508 ERVV-2B6SEH9 535 aa31.92■■■□□ 2.7
C1orf228-201ENST00000357508 RILPL2Q969X0 211 aa31.91■■■□□ 2.7
C1orf228-201ENST00000357508 K7ELQ4 463 aaPredicted RBP31.91■■■□□ 2.7
C1orf228-201ENST00000357508 DDIT3P35638 169 aa31.91■■■□□ 2.7
C1orf228-201ENST00000357508 PIP4K2AP48426 406 aaPredicted RBP31.91■■■□□ 2.7
C1orf228-201ENST00000357508 KCPQ6ZWJ8 1503 aa31.9■■■□□ 2.7
C1orf228-201ENST00000357508 TOGARAM1Q9Y4F4 1720 aa31.9■■■□□ 2.7
C1orf228-201ENST00000357508 ANKRD13DQ6ZTN6 518 aa31.9■■■□□ 2.7
C1orf228-201ENST00000357508 UNC5CLQ8IV45 518 aa31.9■■■□□ 2.7
C1orf228-201ENST00000357508 PI4K2BQ8TCG2 481 aa31.9■■■□□ 2.7
C1orf228-201ENST00000357508 ESYT1Q9BSJ8 1104 aa31.9■■■□□ 2.7
C1orf228-201ENST00000357508 CHMLP26374 656 aa31.9■■■□□ 2.7
C1orf228-201ENST00000357508 MYD88Q99836 296 aa31.9■■■□□ 2.7
C1orf228-201ENST00000357508 SPATA31A5Q5VU36 1347 aa31.89■■■□□ 2.7
C1orf228-201ENST00000357508 SPATA31A7Q8IWB4 1347 aa31.89■■■□□ 2.7
C1orf228-201ENST00000357508 OS9Q13438 667 aaPredicted RBP31.89■■■□□ 2.7
C1orf228-201ENST00000357508 BICC1Q9H694 974 aaKnown RBP31.89■■■□□ 2.7
C1orf228-201ENST00000357508 GCKRQ14397 625 aa31.88■■■□□ 2.69
C1orf228-201ENST00000357508 PA2G4Q9UQ80 394 aaKnown RBP31.87■■■□□ 2.69
C1orf228-201ENST00000357508 BCL9LQ86UU0 1499 aa31.87■■■□□ 2.69
C1orf228-201ENST00000357508 USP42Q9H9J4 1324 aaKnown RBP31.87■■■□□ 2.69
C1orf228-201ENST00000357508 THRAP3Q9Y2W1 955 aaKnown RBP31.87■■■□□ 2.69
C1orf228-201ENST00000357508 CCDC9Q9Y3X0 531 aaKnown RBP31.87■■■□□ 2.69
C1orf228-201ENST00000357508 FNBP4Q8N3X1 1017 aaPredicted RBP31.86■■■□□ 2.69
C1orf228-201ENST00000357508 ERBB4Q15303 1308 aa31.85■■■□□ 2.69
C1orf228-201ENST00000357508 ERC1Q8IUD2 1116 aa31.85■■■□□ 2.69
C1orf228-201ENST00000357508 NUP188Q5SRE5 1749 aa31.85■■■□□ 2.69
C1orf228-201ENST00000357508 EXOC5O00471 708 aa31.83■■■□□ 2.69
C1orf228-201ENST00000357508 TNS2Q63HR2 1409 aa31.83■■■□□ 2.69
C1orf228-201ENST00000357508 TTC41PQ6P2S7 1318 aa31.82■■■□□ 2.69
C1orf228-201ENST00000357508 CLASRPQ8N2M8 674 aaKnown RBP31.82■■■□□ 2.69
C1orf228-201ENST00000357508 WNK3Q9BYP7 1800 aa31.82■■■□□ 2.69
C1orf228-201ENST00000357508 CDCA7Q9BWT1 371 aaPredicted RBP31.82■■■□□ 2.68
C1orf228-201ENST00000357508 NBPF26B4DH59 902 aa31.81■■■□□ 2.68
C1orf228-201ENST00000357508 NBPF14Q5TI25 921 aa31.81■■■□□ 2.68
C1orf228-201ENST00000357508 NBPF10Q6P3W6 841 aaKnown RBP31.81■■■□□ 2.68
C1orf228-201ENST00000357508 NBPF15Q8N660 670 aa31.81■■■□□ 2.68
C1orf228-201ENST00000357508 PLBD2Q8NHP8 589 aa31.81■■■□□ 2.68
C1orf228-201ENST00000357508 CIZ1Q9ULV3 898 aaPredicted RBP31.8■■■□□ 2.68
C1orf228-201ENST00000357508 VPS72Q15906 364 aa31.79■■■□□ 2.68
C1orf228-201ENST00000357508 MAP4K4O95819 1239 aaPredicted RBP31.79■■■□□ 2.68
C1orf228-201ENST00000357508 GSE1Q14687 1217 aa31.79■■■□□ 2.68
C1orf228-201ENST00000357508 MEX3CQ5U5Q3 659 aaKnown RBP31.79■■■□□ 2.68
C1orf228-201ENST00000357508 BARGINQ6ZT62 677 aa31.79■■■□□ 2.68
C1orf228-201ENST00000357508 EPHA10Q5JZY3 1008 aa31.78■■■□□ 2.68
C1orf228-201ENST00000357508 USP21Q9UK80 565 aa31.78■■■□□ 2.68
C1orf228-201ENST00000357508 HSP90AA1P07900 732 aaKnown RBP31.78■■■□□ 2.68
C1orf228-201ENST00000357508 COL15A1P39059 1388 aa31.77■■■□□ 2.68
C1orf228-201ENST00000357508 ITGB4P16144 1822 aa31.77■■■□□ 2.68
C1orf228-201ENST00000357508 GLRX3O76003 335 aaKnown RBP31.76■■■□□ 2.68
C1orf228-201ENST00000357508 SASH1O94885 1247 aa31.76■■■□□ 2.68
C1orf228-201ENST00000357508 CNTROBQ8N137 903 aa31.76■■■□□ 2.68
C1orf228-201ENST00000357508 G3BP1Q13283 466 aaKnown RBP eCLIP31.76■■■□□ 2.67
C1orf228-201ENST00000357508 ANO2Q9NQ90 1003 aa31.75■■■□□ 2.67
C1orf228-201ENST00000357508 DDB1Q16531 1140 aa31.75■■■□□ 2.67
C1orf228-201ENST00000357508 PTCD1O75127 700 aaKnown RBP31.74■■■□□ 2.67
C1orf228-201ENST00000357508 IL25Q9H293 177 aa31.74■■■□□ 2.67
C1orf228-201ENST00000357508 ECHDC1Q9NTX5 307 aa31.74■■■□□ 2.67
C1orf228-201ENST00000357508 TJP1Q07157 1748 aa31.74■■■□□ 2.67
C1orf228-201ENST00000357508 ATP5J2-PTCD1G3V325 749 aa31.73■■■□□ 2.67
C1orf228-201ENST00000357508 ST18O60284 1047 aa31.73■■■□□ 2.67
C1orf228-201ENST00000357508 IFIT2P09913 472 aaKnown RBP31.73■■■□□ 2.67
C1orf228-201ENST00000357508 MCM4P33991 863 aa31.73■■■□□ 2.67
C1orf228-201ENST00000357508 FOXD4L1Q9NU39 408 aa31.73■■■□□ 2.67
C1orf228-201ENST00000357508 AACSQ86V21 672 aa31.73■■■□□ 2.67
C1orf228-201ENST00000357508 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.73■■■□□ 2.67
C1orf228-201ENST00000357508 A1BGP04217 495 aa31.72■■■□□ 2.67
C1orf228-201ENST00000357508 MCCP23508 829 aa31.72■■■□□ 2.67
C1orf228-201ENST00000357508 UBE3BQ7Z3V4 1068 aa31.72■■■□□ 2.67
C1orf228-201ENST00000357508 GPATCH3Q96I76 525 aa31.72■■■□□ 2.67
C1orf228-201ENST00000357508 EPB41L2O43491 1005 aaKnown RBP31.72■■■□□ 2.67
C1orf228-201ENST00000357508 FAM98CQ17RN3 349 aaKnown RBP31.72■■■□□ 2.67
C1orf228-201ENST00000357508 JARID2Q92833 1246 aaPredicted RBP31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms