RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 DIP2CQ9Y2E4 1556 aa9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 F13A1P00488 732 aa9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 NBPF7P0C2Y1 421 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 SOS1Q07889 1333 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 SALL3Q9BXA9 1300 aa9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 CHAF1AQ13111 956 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 TSPYL1Q9H0U9 437 aa9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 ATP6V1DQ9Y5K8 247 aa9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 CRB1P82279 1406 aa9.81□□□□□ -0.84
CDC42SE1-201ENST00000357235 RICTORQ6R327 1708 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 GOLGA6L4A6NEF3 574 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 SGSM2O43147 1006 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 KDM4AO75164 1064 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 NLRP6P59044 892 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 CALCOCO1Q9P1Z2 691 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 GNAT3A8MTJ3 354 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 SLFN14P0C7P3 912 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 TAF7Q15545 349 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 ADCK5Q3MIX3 580 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 CKAP2LQ8IYA6 745 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 RAD50Q92878 1312 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 PDRG1Q9NUG6 133 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 STAP2Q9UGK3 403 aa9.8□□□□□ -0.84
CDC42SE1-201ENST00000357235 RPAP1Q9BWH6 1393 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 STK3Q13188 491 aa9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 ANKRD7Q92527 254 aa9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 PI4KAP2A4QPH2 592 aa9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 UVSSAQ2YD98 709 aa9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 PI4KAP1Q8N8J0 262 aa9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 KIF1BPQ96EK5 621 aa9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 TFIP11Q9UBB9 837 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 PYCARDQ9ULZ3 195 aa9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 CLTCQ00610 1675 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-201ENST00000357235 CAPN2P17655 700 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 PTH1RQ03431 593 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 LARP1BQ659C4 914 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 PI4K2BQ8TCG2 481 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 A2ML1A8K2U0 1454 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 TULP2O00295 520 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 CEBPAP49715 358 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 LUZP1Q86V48 1076 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 IL17REQ8NFR9 667 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 LSG1Q9H089 658 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 PA2G4Q9UQ80 394 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 CYP46A1Q9Y6A2 500 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 PREX1Q8TCU6 1659 aa9.78□□□□□ -0.84
CDC42SE1-201ENST00000357235 AP5Z1O43299 807 aa9.77□□□□□ -0.84
CDC42SE1-201ENST00000357235 IFIT2P09913 472 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-201ENST00000357235 CCDC192P0DO97 292 aa9.77□□□□□ -0.84
CDC42SE1-201ENST00000357235 HDGFP51858 240 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-201ENST00000357235 CLASRPQ8N2M8 674 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-201ENST00000357235 SSH3Q8TE77 659 aa9.77□□□□□ -0.84
CDC42SE1-201ENST00000357235 ROBO2Q9HCK4 1378 aa9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 ZKSCAN1P17029 563 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 C9orf78Q9NZ63 289 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 CHPF2Q9P2E5 772 aa9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 TCHHQ07283 1943 aa9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 PTGS1P23219 599 aa9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 TNNT3P45378 269 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 TERF2Q15554 542 aa9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 C16orf45Q96MC5 204 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 TTC14Q96N46 770 aa9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 HYPKQ9NX55 129 aa9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 HDAC5Q9UQL6 1122 aa9.77□□□□□ -0.85
CDC42SE1-201ENST00000357235 GOLGA6L6A8MZA4 724 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 RIOK3O14730 519 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 RAB11FIP3O75154 756 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 APPP05067 770 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 FOSBP53539 338 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 ME3Q16798 604 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 SIL1Q9H173 461 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 MTMR6Q9Y217 621 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 SSH2Q76I76 1423 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 ERICH4A6NGS2 130 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 CEBPZQ03701 1054 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 ZNF592Q92610 1267 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 ZBTB9Q96C00 473 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 TRIM5Q9C035 493 aa9.76□□□□□ -0.85
CDC42SE1-201ENST00000357235 GLRX3O76003 335 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 LIG1P18858 919 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 KRT85P78386 507 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 CDC37L1Q7L3B6 337 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 AACSQ86V21 672 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 NUP62CLQ9H1M0 184 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 KCNF1Q9H3M0 494 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 CLGNO14967 610 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 LRMPQ12912 555 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 COL9A3Q14050 684 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 MAP3K11Q16584 847 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 CCDC186Q7Z3E2 898 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 BICD2Q8TD16 824 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 FAM227BQ96M60 508 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 CCDC8Q9H0W5 538 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 TNMDQ9H2S6 317 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 SPTLC3Q9NUV7 552 aa9.75□□□□□ -0.85
CDC42SE1-201ENST00000357235 DACT1Q9NYF0 836 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms