RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 LGR6Q9HBX8 967 aa23.83■■□□□ 1.41
RNF38-204ENST00000357058 CLASP1Q7Z460 1538 aa23.83■■□□□ 1.4
RNF38-204ENST00000357058 OLFM4Q6UX06 510 aa23.83■■□□□ 1.4
RNF38-204ENST00000357058 SNRKQ9NRH2 765 aa23.83■■□□□ 1.4
RNF38-204ENST00000357058 ME1P48163 572 aa23.83■■□□□ 1.4
RNF38-204ENST00000357058 MAP3K12Q12852 859 aa23.83■■□□□ 1.4
RNF38-204ENST00000357058 DDX17Q92841 729 aaKnown RBP23.83■■□□□ 1.4
RNF38-204ENST00000357058 LRRIQ1Q96JM4 1722 aa23.82■■□□□ 1.4
RNF38-204ENST00000357058 LMBR1LQ6UX01 489 aa23.82■■□□□ 1.4
RNF38-204ENST00000357058 PA2G4Q9UQ80 394 aaKnown RBP23.82■■□□□ 1.4
RNF38-204ENST00000357058 FAM135BQ49AJ0 1406 aa23.82■■□□□ 1.4
RNF38-204ENST00000357058 PCDH11XQ9BZA7 1347 aa23.82■■□□□ 1.4
RNF38-204ENST00000357058 PCDH11YQ9BZA8 1340 aa23.82■■□□□ 1.4
RNF38-204ENST00000357058 UBAP1LF5GYI3 381 aa23.82■■□□□ 1.4
RNF38-204ENST00000357058 SPATA32Q96LK8 384 aa23.82■■□□□ 1.4
RNF38-204ENST00000357058 SH2B1Q9NRF2 756 aaPredicted RBP23.82■■□□□ 1.4
RNF38-204ENST00000357058 LIMCH1Q9UPQ0 1083 aa23.82■■□□□ 1.4
RNF38-204ENST00000357058 DDB1Q16531 1140 aa23.81■■□□□ 1.4
RNF38-204ENST00000357058 JMYQ8N9B5 988 aa23.81■■□□□ 1.4
RNF38-204ENST00000357058 PCMTD1Q96MG8 357 aaPredicted RBP23.81■■□□□ 1.4
RNF38-204ENST00000357058 ROBO2Q9HCK4 1378 aa23.8■■□□□ 1.4
RNF38-204ENST00000357058 ARHGAP31Q2M1Z3 1444 aa23.8■■□□□ 1.4
RNF38-204ENST00000357058 NLRP1Q9C000 1473 aa23.8■■□□□ 1.4
RNF38-204ENST00000357058 PDIA4P13667 645 aaKnown RBP23.79■■□□□ 1.4
RNF38-204ENST00000357058 HMGB2P26583 209 aaKnown RBP23.79■■□□□ 1.4
RNF38-204ENST00000357058 LARP6Q9BRS8 491 aaKnown RBP23.79■■□□□ 1.4
RNF38-204ENST00000357058 NAPBQ9H115 298 aa23.79■■□□□ 1.4
RNF38-204ENST00000357058 FERMT3Q86UX7 667 aa23.79■■□□□ 1.4
RNF38-204ENST00000357058 ATP7BP35670 1465 aa23.79■■□□□ 1.4
RNF38-204ENST00000357058 SSFA2P28290 1259 aa23.79■■□□□ 1.4
RNF38-204ENST00000357058 ATP6V1AP38606 617 aa23.79■■□□□ 1.4
RNF38-204ENST00000357058 ATP2B2Q01814 1243 aa23.79■■□□□ 1.4
RNF38-204ENST00000357058 DDX21Q9NR30 783 aaKnown RBP eCLIP23.79■■□□□ 1.4
RNF38-204ENST00000357058 ANKIB1Q9P2G1 1089 aa23.79■■□□□ 1.4
RNF38-204ENST00000357058 ZNF790Q6PG37 636 aa23.78■■□□□ 1.4
RNF38-204ENST00000357058 HMGB1P09429 215 aaKnown RBP23.78■■□□□ 1.4
RNF38-204ENST00000357058 ZNF592Q92610 1267 aa23.78■■□□□ 1.4
RNF38-204ENST00000357058 TNMDQ9H2S6 317 aa23.78■■□□□ 1.4
RNF38-204ENST00000357058 CFAP45Q9UL16 551 aa23.78■■□□□ 1.4
RNF38-204ENST00000357058 BTG4Q9NY30 223 aa23.77■■□□□ 1.4
RNF38-204ENST00000357058 TRPM1Q7Z4N2 1603 aa23.77■■□□□ 1.4
RNF38-204ENST00000357058 MAP3K4Q9Y6R4 1608 aa23.77■■□□□ 1.4
RNF38-204ENST00000357058 ESYT1Q9BSJ8 1104 aa23.77■■□□□ 1.4
RNF38-204ENST00000357058 CCDC39Q9UFE4 941 aa23.77■■□□□ 1.4
RNF38-204ENST00000357058 MINDY4BA8MYZ0 360 aa23.77■■□□□ 1.4
RNF38-204ENST00000357058 PLEKHM2Q8IWE5 1019 aa23.77■■□□□ 1.4
RNF38-204ENST00000357058 CDC5LQ99459 802 aaKnown RBP23.77■■□□□ 1.4
RNF38-204ENST00000357058 DDX46Q7L014 1031 aaKnown RBP23.76■■□□□ 1.39
RNF38-204ENST00000357058 PLEKHF1Q96S99 279 aa23.76■■□□□ 1.39
RNF38-204ENST00000357058 TRIM5Q9C035 493 aa23.76■■□□□ 1.39
RNF38-204ENST00000357058 PPP1R1BQ9UD71 204 aaPredicted RBP23.76■■□□□ 1.39
RNF38-204ENST00000357058 KDM2BQ8NHM5 1336 aa23.76■■□□□ 1.39
RNF38-204ENST00000357058 TNPO1Q92973 898 aaKnown RBP23.76■■□□□ 1.39
RNF38-204ENST00000357058 ZNF213O14771 459 aa23.76■■□□□ 1.39
RNF38-204ENST00000357058 RBM5P52756 815 aaKnown RBP eCLIP23.76■■□□□ 1.39
RNF38-204ENST00000357058 CCDC192P0DO97 292 aa23.76■■□□□ 1.39
RNF38-204ENST00000357058 HOXB7P09629 217 aa23.75■■□□□ 1.39
RNF38-204ENST00000357058 AATKQ6ZMQ8 1374 aa23.75■■□□□ 1.39
RNF38-204ENST00000357058 GRPEL1Q9HAV7 217 aa23.75■■□□□ 1.39
RNF38-204ENST00000357058 BRPF3Q9ULD4 1205 aa23.75■■□□□ 1.39
RNF38-204ENST00000357058 ABCA9Q8IUA7 1624 aa23.75■■□□□ 1.39
RNF38-204ENST00000357058 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
RNF38-204ENST00000357058 TTF1Q15361 905 aaPredicted RBP23.74■■□□□ 1.39
RNF38-204ENST00000357058 AK7Q96M32 723 aa23.74■■□□□ 1.39
RNF38-204ENST00000357058 RNF17Q9BXT8 1623 aaKnown RBP23.74■■□□□ 1.39
RNF38-204ENST00000357058 SPHKAPQ2M3C7 1700 aa23.74■■□□□ 1.39
RNF38-204ENST00000357058 USP19O94966 1318 aa23.74■■□□□ 1.39
RNF38-204ENST00000357058 FAM43AQ8N2R8 423 aa23.73■■□□□ 1.39
RNF38-204ENST00000357058 IL15P40933 162 aaPredicted RBP23.73■■□□□ 1.39
RNF38-204ENST00000357058 RPGRQ92834 1020 aaKnown RBP23.72■■□□□ 1.39
RNF38-204ENST00000357058 LMTK3Q96Q04 1460 aa23.72■■□□□ 1.39
RNF38-204ENST00000357058 PRR36Q9H6K5 1346 aa23.72■■□□□ 1.39
RNF38-204ENST00000357058 TXLNAP40222 546 aa23.72■■□□□ 1.39
RNF38-204ENST00000357058 CCDC173Q0VFZ6 552 aa23.72■■□□□ 1.39
RNF38-204ENST00000357058 CCDC152Q4G0S7 254 aa23.72■■□□□ 1.39
RNF38-204ENST00000357058 DZIP1Q86YF9 867 aaKnown RBP23.72■■□□□ 1.39
RNF38-204ENST00000357058 WASF1Q92558 559 aa23.71■■□□□ 1.39
RNF38-204ENST00000357058 BICC1Q9H694 974 aaKnown RBP23.71■■□□□ 1.39
RNF38-204ENST00000357058 SLC52A2Q9HAB3 445 aa23.71■■□□□ 1.39
RNF38-204ENST00000357058 SMARCC1Q92922 1105 aaPredicted RBP23.71■■□□□ 1.39
RNF38-204ENST00000357058 SLAIN2Q9P270 581 aa23.71■■□□□ 1.39
RNF38-204ENST00000357058 USP5P45974 858 aa23.71■■□□□ 1.39
RNF38-204ENST00000357058 KIAA0232Q92628 1395 aa23.71■■□□□ 1.39
RNF38-204ENST00000357058 HOMER1Q86YM7 354 aa23.7■■□□□ 1.39
RNF38-204ENST00000357058 TTC41PQ6P2S7 1318 aa23.7■■□□□ 1.38
RNF38-204ENST00000357058 IPO7O95373 1038 aaKnown RBP23.7■■□□□ 1.38
RNF38-204ENST00000357058 DZIP3Q86Y13 1208 aaKnown RBP23.7■■□□□ 1.38
RNF38-204ENST00000357058 SEC24BO95487 1268 aa23.7■■□□□ 1.38
RNF38-204ENST00000357058 CCDC43Q96MW1 224 aaKnown RBP23.7■■□□□ 1.38
RNF38-204ENST00000357058 HMG20BQ9P0W2 317 aa23.7■■□□□ 1.38
RNF38-204ENST00000357058 ATP2B3Q16720 1220 aa23.7■■□□□ 1.38
RNF38-204ENST00000357058 NUP62CLQ9H1M0 184 aa23.69■■□□□ 1.38
RNF38-204ENST00000357058 RFC4P35249 363 aa23.69■■□□□ 1.38
RNF38-204ENST00000357058 NEK1Q96PY6 1258 aa23.69■■□□□ 1.38
RNF38-204ENST00000357058 ZSCAN29Q8IWY8 852 aaPredicted RBP23.68■■□□□ 1.38
RNF38-204ENST00000357058 NOL7Q9UMY1 257 aaKnown RBP23.68■■□□□ 1.38
RNF38-204ENST00000357058 USP6P35125 1406 aa23.68■■□□□ 1.38
RNF38-204ENST00000357058 TRMT2AQ8IZ69 625 aaKnown RBP23.68■■□□□ 1.38
RNF38-204ENST00000357058 PIBF1Q8WXW3 757 aa23.68■■□□□ 1.38
RNF38-204ENST00000357058 HAND2P61296 217 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms