RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 PI4KAP2A4QPH2 592 aa16.16■□□□□ 0.18
TRIM4-203ENST00000355947 PI4KAP1Q8N8J0 262 aa16.16■□□□□ 0.18
TRIM4-203ENST00000355947 FAM227BQ96M60 508 aa16.16■□□□□ 0.18
TRIM4-203ENST00000355947 SLC26A8Q96RN1 970 aa16.16■□□□□ 0.18
TRIM4-203ENST00000355947 FAM200AQ8TCP9 573 aa16.15■□□□□ 0.18
TRIM4-203ENST00000355947 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
TRIM4-203ENST00000355947 CBX8Q9HC52 389 aa16.15■□□□□ 0.18
TRIM4-203ENST00000355947 RGS12O14924 1447 aa16.15■□□□□ 0.18
TRIM4-203ENST00000355947 NRXN1Q9ULB1 1477 aa16.15■□□□□ 0.18
TRIM4-203ENST00000355947 BBXQ8WY36 941 aaPredicted RBP16.15■□□□□ 0.18
TRIM4-203ENST00000355947 OSBPL3Q9H4L5 887 aa16.15■□□□□ 0.18
TRIM4-203ENST00000355947 CD163L1Q9NR16 1453 aa16.14■□□□□ 0.18
TRIM4-203ENST00000355947 INO80Q9ULG1 1556 aaPredicted RBP16.14■□□□□ 0.17
TRIM4-203ENST00000355947 ACEP12821 1306 aa16.14■□□□□ 0.17
TRIM4-203ENST00000355947 NLRP6P59044 892 aa16.14■□□□□ 0.17
TRIM4-203ENST00000355947 RAD50Q92878 1312 aa16.14■□□□□ 0.17
TRIM4-203ENST00000355947 EDC3Q96F86 508 aaKnown RBP16.14■□□□□ 0.17
TRIM4-203ENST00000355947 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
TRIM4-203ENST00000355947 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
TRIM4-203ENST00000355947 LARP1Q6PKG0 1096 aaKnown RBP16.13■□□□□ 0.17
TRIM4-203ENST00000355947 RUFY2Q8WXA3 655 aa16.13■□□□□ 0.17
TRIM4-203ENST00000355947 ARAP3Q8WWN8 1544 aa16.13■□□□□ 0.17
TRIM4-203ENST00000355947 FAM69CQ0P6D2 419 aa16.13■□□□□ 0.17
TRIM4-203ENST00000355947 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
TRIM4-203ENST00000355947 FAM177A1Q8N128 213 aaPredicted RBP16.13■□□□□ 0.17
TRIM4-203ENST00000355947 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
TRIM4-203ENST00000355947 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
TRIM4-203ENST00000355947 ISM2Q6H9L7 571 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 TMX1Q9H3N1 280 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 TPCN1Q9ULQ1 816 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 JAK2O60674 1132 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 BLOC1S2Q6QNY1 142 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 EYA1Q99502 592 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 LSG1Q9H089 658 aaKnown RBP16.12■□□□□ 0.17
TRIM4-203ENST00000355947 SETBP1Q9Y6X0 1596 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 NR1I2O75469 434 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 FTOQ9C0B1 505 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRIM4-203ENST00000355947 MRVI1Q9Y6F6 885 aa16.12■□□□□ 0.17
TRIM4-203ENST00000355947 KNDC1Q76NI1 1749 aa16.11■□□□□ 0.17
TRIM4-203ENST00000355947 KIDINS220Q9ULH0 1771 aa16.11■□□□□ 0.17
TRIM4-203ENST00000355947 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
TRIM4-203ENST00000355947 HYPKQ9NX55 129 aa16.11■□□□□ 0.17
TRIM4-203ENST00000355947 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
TRIM4-203ENST00000355947 CACTINQ8WUQ7 758 aaKnown RBP16.11■□□□□ 0.17
TRIM4-203ENST00000355947 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
TRIM4-203ENST00000355947 ST7Q9NRC1 585 aa16.1■□□□□ 0.17
TRIM4-203ENST00000355947 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
TRIM4-203ENST00000355947 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
TRIM4-203ENST00000355947 ZC3H13Q5T200 1668 aaKnown RBP16.1■□□□□ 0.17
TRIM4-203ENST00000355947 MROH1Q8NDA8 1641 aa16.1■□□□□ 0.17
TRIM4-203ENST00000355947 USP27XA6NNY8 438 aa16.1■□□□□ 0.17
TRIM4-203ENST00000355947 CEP135Q66GS9 1140 aa16.1■□□□□ 0.17
TRIM4-203ENST00000355947 BIN1O00499 593 aa16.1■□□□□ 0.17
TRIM4-203ENST00000355947 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
TRIM4-203ENST00000355947 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
TRIM4-203ENST00000355947 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
TRIM4-203ENST00000355947 MAP2P11137 1827 aaKnown RBP16.1■□□□□ 0.17
TRIM4-203ENST00000355947 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 GPATCH3Q96I76 525 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 KCNQ3O43525 872 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 ZSCAN25Q6NSZ9 544 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
TRIM4-203ENST00000355947 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
TRIM4-203ENST00000355947 ELF2Q15723 593 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 PTPN21Q16825 1174 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 CCDC144BQ3MJ40 725 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 CCDC144CPQ8IYA2 1237 aa16.09■□□□□ 0.17
TRIM4-203ENST00000355947 GTPBP4Q9BZE4 634 aaKnown RBP16.09■□□□□ 0.17
TRIM4-203ENST00000355947 ZNF215Q9UL58 517 aaPredicted RBP16.09■□□□□ 0.17
TRIM4-203ENST00000355947 YEATS2Q9ULM3 1422 aa16.08■□□□□ 0.17
TRIM4-203ENST00000355947 GLRX3O76003 335 aaKnown RBP16.08■□□□□ 0.17
TRIM4-203ENST00000355947 SMC2O95347 1197 aa16.08■□□□□ 0.17
TRIM4-203ENST00000355947 CCT2P78371 535 aaKnown RBP16.08■□□□□ 0.17
TRIM4-203ENST00000355947 PTPN14Q15678 1187 aa16.08■□□□□ 0.17
TRIM4-203ENST00000355947 PI4K2BQ8TCG2 481 aa16.08■□□□□ 0.17
TRIM4-203ENST00000355947 SPTLC3Q9NUV7 552 aa16.08■□□□□ 0.17
TRIM4-203ENST00000355947 SKILP12757 684 aa16.08■□□□□ 0.16
TRIM4-203ENST00000355947 PRR36Q9H6K5 1346 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 CHGBP05060 677 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 TTC14Q96N46 770 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 MYO3AQ8NEV4 1616 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 TPM3P06753 285 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 ZNF75DP51815 510 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 TEFQ10587 303 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 SDF4Q9BRK5 362 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 PTPRMP28827 1452 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 CCAR2Q8N163 923 aaKnown RBP16.07■□□□□ 0.16
TRIM4-203ENST00000355947 BRF1Q92994 677 aa16.07■□□□□ 0.16
TRIM4-203ENST00000355947 POLR3GO15318 223 aaPredicted RBP16.06■□□□□ 0.16
TRIM4-203ENST00000355947 ME1P48163 572 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 PIP4K2AP48426 406 aaPredicted RBP16.06■□□□□ 0.16
TRIM4-203ENST00000355947 G3BP1Q13283 466 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRIM4-203ENST00000355947 CCDC129Q6ZRS4 1044 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 CHST3Q7LGC8 479 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 ARHGEF28Q8N1W1 1705 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms