RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NCBP3Q53F19 620 aaKnown RBP16.61■□□□□ 0.25
SREBF1-202ENST00000355815 GAS2L3Q86XJ1 694 aa16.61■□□□□ 0.25
SREBF1-202ENST00000355815 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.61■□□□□ 0.25
SREBF1-202ENST00000355815 V9GYY5 206 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-202ENST00000355815 ATP2B1P20020 1258 aa16.61■□□□□ 0.25
SREBF1-202ENST00000355815 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-202ENST00000355815 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
SREBF1-202ENST00000355815 UNC5CLQ8IV45 518 aa16.6■□□□□ 0.25
SREBF1-202ENST00000355815 XAGE3Q8WTP9 111 aa16.6■□□□□ 0.25
SREBF1-202ENST00000355815 KLHL40Q2TBA0 621 aa16.6■□□□□ 0.25
SREBF1-202ENST00000355815 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
SREBF1-202ENST00000355815 KIF1BO60333 1816 aa16.6■□□□□ 0.25
SREBF1-202ENST00000355815 MLH3Q9UHC1 1453 aa16.6■□□□□ 0.25
SREBF1-202ENST00000355815 PSMA5P28066 241 aa16.6■□□□□ 0.25
SREBF1-202ENST00000355815 CWC15Q9P013 229 aaKnown RBP16.6■□□□□ 0.25
SREBF1-202ENST00000355815 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
SREBF1-202ENST00000355815 TET3O43151 1660 aa16.59■□□□□ 0.25
SREBF1-202ENST00000355815 TTC21AQ8NDW8 1320 aa16.59■□□□□ 0.25
SREBF1-202ENST00000355815 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
SREBF1-202ENST00000355815 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
SREBF1-202ENST00000355815 CKAP2LQ8IYA6 745 aa16.59■□□□□ 0.25
SREBF1-202ENST00000355815 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
SREBF1-202ENST00000355815 ADCY5O95622 1261 aa16.59■□□□□ 0.25
SREBF1-202ENST00000355815 ZNF853P0CG23 659 aa16.59■□□□□ 0.25
SREBF1-202ENST00000355815 LEKR1Q6ZMV7 388 aa16.59■□□□□ 0.25
SREBF1-202ENST00000355815 PIK3R4Q99570 1358 aa16.59■□□□□ 0.25
SREBF1-202ENST00000355815 CNPY2Q9Y2B0 182 aa16.58■□□□□ 0.25
SREBF1-202ENST00000355815 RTL1A6NKG5 1358 aa16.58■□□□□ 0.25
SREBF1-202ENST00000355815 TSR1Q2NL82 804 aaKnown RBP16.58■□□□□ 0.24
SREBF1-202ENST00000355815 ABCA6Q8N139 1617 aa16.58■□□□□ 0.24
SREBF1-202ENST00000355815 CCDC34Q96HJ3 373 aa16.58■□□□□ 0.24
SREBF1-202ENST00000355815 ABCC3O15438 1527 aa16.58■□□□□ 0.24
SREBF1-202ENST00000355815 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
SREBF1-202ENST00000355815 FAM173BQ6P4H8 233 aa16.58■□□□□ 0.24
SREBF1-202ENST00000355815 LIMCH1Q9UPQ0 1083 aa16.58■□□□□ 0.24
SREBF1-202ENST00000355815 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
SREBF1-202ENST00000355815 TNNT1P13805 278 aa16.57■□□□□ 0.24
SREBF1-202ENST00000355815 BRPF1P55201 1214 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-202ENST00000355815 AXDND1Q5T1B0 1012 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-202ENST00000355815 LARP1Q6PKG0 1096 aaKnown RBP16.57■□□□□ 0.24
SREBF1-202ENST00000355815 SPHKAPQ2M3C7 1700 aa16.57■□□□□ 0.24
SREBF1-202ENST00000355815 PLEKHG3A1L390 1219 aa16.57■□□□□ 0.24
SREBF1-202ENST00000355815 GJB2P29033 226 aa16.57■□□□□ 0.24
SREBF1-202ENST00000355815 EDC3Q96F86 508 aaKnown RBP16.57■□□□□ 0.24
SREBF1-202ENST00000355815 OFD1O75665 1012 aa16.56■□□□□ 0.24
SREBF1-202ENST00000355815 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
SREBF1-202ENST00000355815 TPM1P09493 284 aa16.56■□□□□ 0.24
SREBF1-202ENST00000355815 GIMAP6Q6P9H5 292 aa16.56■□□□□ 0.24
SREBF1-202ENST00000355815 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-202ENST00000355815 TMEM2Q9UHN6 1383 aa16.56■□□□□ 0.24
SREBF1-202ENST00000355815 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
SREBF1-202ENST00000355815 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
SREBF1-202ENST00000355815 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-202ENST00000355815 GPTP24298 496 aa16.56■□□□□ 0.24
SREBF1-202ENST00000355815 TSPYL1Q9H0U9 437 aa16.55■□□□□ 0.24
SREBF1-202ENST00000355815 RRP12Q5JTH9 1297 aaKnown RBP16.55■□□□□ 0.24
SREBF1-202ENST00000355815 NFXL1Q6ZNB6 911 aa16.55■□□□□ 0.24
SREBF1-202ENST00000355815 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
SREBF1-202ENST00000355815 STX6O43752 255 aa16.55■□□□□ 0.24
SREBF1-202ENST00000355815 AK2P54819 239 aa16.55■□□□□ 0.24
SREBF1-202ENST00000355815 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
SREBF1-202ENST00000355815 C17orf53Q8N3J3 647 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-202ENST00000355815 UBXN4Q92575 508 aa16.55■□□□□ 0.24
SREBF1-202ENST00000355815 ANKRD13DQ6ZTN6 518 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 TMX1Q9H3N1 280 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 ZKSCAN5Q9Y2L8 839 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 GOLIM4O00461 696 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 HAND2P61296 217 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
SREBF1-202ENST00000355815 NUP62CLQ9H1M0 184 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 GRM8O00222 908 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 SOS1Q07889 1333 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-202ENST00000355815 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
SREBF1-202ENST00000355815 KRT85P78386 507 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 SYNE3Q6ZMZ3 975 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 TRDNQ13061 729 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 NOLC1Q14978 699 aaKnown RBP eCLIP16.53■□□□□ 0.24
SREBF1-202ENST00000355815 PTPN14Q15678 1187 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 CHST3Q7LGC8 479 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 SPATA32Q96LK8 384 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 HYPKQ9NX55 129 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
SREBF1-202ENST00000355815 NEO1Q92859 1461 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 TSPOAP1O95153 1857 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 IPO7O95373 1038 aaKnown RBP16.53■□□□□ 0.24
SREBF1-202ENST00000355815 DNM1Q05193 864 aaKnown RBP16.53■□□□□ 0.24
SREBF1-202ENST00000355815 KSR2Q6VAB6 950 aa16.53■□□□□ 0.24
SREBF1-202ENST00000355815 BICC1Q9H694 974 aaKnown RBP16.53■□□□□ 0.24
SREBF1-202ENST00000355815 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.24
SREBF1-202ENST00000355815 GPATCH11Q8N954 259 aa16.52■□□□□ 0.24
SREBF1-202ENST00000355815 IP6K1Q92551 441 aa16.52■□□□□ 0.24
SREBF1-202ENST00000355815 FAM227BQ96M60 508 aa16.52■□□□□ 0.24
SREBF1-202ENST00000355815 RBSNQ9H1K0 784 aa16.52■□□□□ 0.24
SREBF1-202ENST00000355815 CNNM1Q9NRU3 951 aa16.52■□□□□ 0.24
SREBF1-202ENST00000355815 CEP126Q9P2H0 1117 aa16.52■□□□□ 0.24
SREBF1-202ENST00000355815 HSPA2P54652 639 aa16.52■□□□□ 0.24
SREBF1-202ENST00000355815 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.23
SREBF1-202ENST00000355815 FAM193AP78312 1265 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms