RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
PGBD2-202ENST00000355360 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
PGBD2-202ENST00000355360 RAD50Q92878 1312 aa17.01■□□□□ 0.31
PGBD2-202ENST00000355360 CASTP20810 708 aaKnown RBP17■□□□□ 0.31
PGBD2-202ENST00000355360 MPNDQ8N594 471 aa17■□□□□ 0.31
PGBD2-202ENST00000355360 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
PGBD2-202ENST00000355360 ISY1Q9ULR0 285 aaKnown RBP17■□□□□ 0.31
PGBD2-202ENST00000355360 PRPF40BQ6NWY9 871 aaKnown RBP17■□□□□ 0.31
PGBD2-202ENST00000355360 KSR2Q6VAB6 950 aa17■□□□□ 0.31
PGBD2-202ENST00000355360 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
PGBD2-202ENST00000355360 NFATC2IPQ8NCF5 419 aa17■□□□□ 0.31
PGBD2-202ENST00000355360 FAM227BQ96M60 508 aa17■□□□□ 0.31
PGBD2-202ENST00000355360 CHGBP05060 677 aa16.99■□□□□ 0.31
PGBD2-202ENST00000355360 ZNF445P59923 1031 aa16.99■□□□□ 0.31
PGBD2-202ENST00000355360 ANAPC15P60006 121 aa16.99■□□□□ 0.31
PGBD2-202ENST00000355360 RUFY3Q7L099 469 aa16.99■□□□□ 0.31
PGBD2-202ENST00000355360 USP54Q70EL1 1684 aa16.99■□□□□ 0.31
PGBD2-202ENST00000355360 IFIT2P09913 472 aaKnown RBP16.99■□□□□ 0.31
PGBD2-202ENST00000355360 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
PGBD2-202ENST00000355360 DIAPH3Q9NSV4 1193 aa16.99■□□□□ 0.31
PGBD2-202ENST00000355360 SASH1O94885 1247 aa16.99■□□□□ 0.31
PGBD2-202ENST00000355360 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
PGBD2-202ENST00000355360 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
PGBD2-202ENST00000355360 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
PGBD2-202ENST00000355360 LMO7Q8WWI1 1683 aa16.98■□□□□ 0.31
PGBD2-202ENST00000355360 PDIA6Q15084 440 aa16.98■□□□□ 0.31
PGBD2-202ENST00000355360 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
PGBD2-202ENST00000355360 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
PGBD2-202ENST00000355360 TAF6LQ9Y6J9 622 aa16.98■□□□□ 0.31
PGBD2-202ENST00000355360 IGKV5-2P06315 115 aa16.97■□□□□ 0.31
PGBD2-202ENST00000355360 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
PGBD2-202ENST00000355360 AOX1Q06278 1338 aa16.97■□□□□ 0.31
PGBD2-202ENST00000355360 HOXB7P09629 217 aa16.97■□□□□ 0.31
PGBD2-202ENST00000355360 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
PGBD2-202ENST00000355360 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
PGBD2-202ENST00000355360 CNPY2Q9Y2B0 182 aa16.97■□□□□ 0.31
PGBD2-202ENST00000355360 GRM8O00222 908 aa16.96■□□□□ 0.31
PGBD2-202ENST00000355360 MCM2P49736 904 aa16.96■□□□□ 0.31
PGBD2-202ENST00000355360 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
PGBD2-202ENST00000355360 NECAB1Q8N987 351 aa16.96■□□□□ 0.31
PGBD2-202ENST00000355360 RPAP1Q9BWH6 1393 aaPredicted RBP16.96■□□□□ 0.31
PGBD2-202ENST00000355360 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
PGBD2-202ENST00000355360 CCDC173Q0VFZ6 552 aa16.96■□□□□ 0.31
PGBD2-202ENST00000355360 TTC14Q96N46 770 aa16.96■□□□□ 0.31
PGBD2-202ENST00000355360 ECHDC1Q9NTX5 307 aa16.96■□□□□ 0.31
PGBD2-202ENST00000355360 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
PGBD2-202ENST00000355360 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
PGBD2-202ENST00000355360 MYD88Q99836 296 aa16.95■□□□□ 0.3
PGBD2-202ENST00000355360 ERBB3P21860 1342 aa16.95■□□□□ 0.3
PGBD2-202ENST00000355360 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
PGBD2-202ENST00000355360 ZNF496Q96IT1 587 aaPredicted RBP16.95■□□□□ 0.3
PGBD2-202ENST00000355360 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
PGBD2-202ENST00000355360 PTCD1O75127 700 aaKnown RBP16.95■□□□□ 0.3
PGBD2-202ENST00000355360 ZNF790Q6PG37 636 aa16.95■□□□□ 0.3
PGBD2-202ENST00000355360 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
PGBD2-202ENST00000355360 CSB-PGBD3P0DP91 1061 aa16.94■□□□□ 0.3
PGBD2-202ENST00000355360 NMIQ13287 307 aaPredicted RBP16.94■□□□□ 0.3
PGBD2-202ENST00000355360 INTS4Q96HW7 963 aaKnown RBP16.94■□□□□ 0.3
PGBD2-202ENST00000355360 PPP1R9BQ96SB3 815 aa16.94■□□□□ 0.3
PGBD2-202ENST00000355360 FIBPO43427 364 aa16.93■□□□□ 0.3
PGBD2-202ENST00000355360 KCNJ4P48050 445 aa16.93■□□□□ 0.3
PGBD2-202ENST00000355360 LRSAM1Q6UWE0 723 aa16.93■□□□□ 0.3
PGBD2-202ENST00000355360 RAPGEF4Q8WZA2 1011 aa16.93■□□□□ 0.3
PGBD2-202ENST00000355360 A0A0D9SFI3 127 aa16.93■□□□□ 0.3
PGBD2-202ENST00000355360 SYT1P21579 422 aa16.93■□□□□ 0.3
PGBD2-202ENST00000355360 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
PGBD2-202ENST00000355360 LINS1Q8NG48 757 aa16.93■□□□□ 0.3
PGBD2-202ENST00000355360 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
PGBD2-202ENST00000355360 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
PGBD2-202ENST00000355360 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.3
PGBD2-202ENST00000355360 MTX1Q13505 466 aa16.92■□□□□ 0.3
PGBD2-202ENST00000355360 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
PGBD2-202ENST00000355360 ALDH1L1O75891 902 aa16.91■□□□□ 0.3
PGBD2-202ENST00000355360 ST3GAL1Q11201 340 aa16.91■□□□□ 0.3
PGBD2-202ENST00000355360 LIMCH1Q9UPQ0 1083 aa16.91■□□□□ 0.3
PGBD2-202ENST00000355360 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
PGBD2-202ENST00000355360 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
PGBD2-202ENST00000355360 KDM6AO15550 1401 aaPredicted RBP16.91■□□□□ 0.3
PGBD2-202ENST00000355360 SLFNL1Q499Z3 407 aa16.91■□□□□ 0.3
PGBD2-202ENST00000355360 FAM173BQ6P4H8 233 aa16.91■□□□□ 0.3
PGBD2-202ENST00000355360 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
PGBD2-202ENST00000355360 ZNF589Q86UQ0 364 aaPredicted RBP16.91■□□□□ 0.3
PGBD2-202ENST00000355360 C5P01031 1676 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 FSD1Q9BTV5 496 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 PDRG1Q9NUG6 133 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 SMC3Q9UQE7 1217 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
PGBD2-202ENST00000355360 NEURL1BA8MQ27 555 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 GJB2P29033 226 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 FERMT3Q86UX7 667 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
PGBD2-202ENST00000355360 MEGF6O75095 1541 aa16.89■□□□□ 0.29
PGBD2-202ENST00000355360 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.29
PGBD2-202ENST00000355360 STX6O43752 255 aa16.89■□□□□ 0.29
PGBD2-202ENST00000355360 ME3Q16798 604 aa16.89■□□□□ 0.29
PGBD2-202ENST00000355360 UBE3BQ7Z3V4 1068 aa16.89■□□□□ 0.29
PGBD2-202ENST00000355360 PHKG2P15735 406 aa16.89■□□□□ 0.29
PGBD2-202ENST00000355360 STK3Q13188 491 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms