RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ITPK1Q13572 414 aa12.07□□□□□ -0.48
NPHP1-202ENST00000355301 TTLL7Q6ZT98 887 aa12.07□□□□□ -0.48
NPHP1-202ENST00000355301 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
NPHP1-202ENST00000355301 LY75O60449 1722 aa12.07□□□□□ -0.48
NPHP1-202ENST00000355301 GNAI2P04899 355 aa12.07□□□□□ -0.48
NPHP1-202ENST00000355301 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
NPHP1-202ENST00000355301 IL6STP40189 918 aaPredicted RBP12.07□□□□□ -0.48
NPHP1-202ENST00000355301 RPAP2Q8IXW5 612 aaPredicted RBP12.07□□□□□ -0.48
NPHP1-202ENST00000355301 PELP1Q8IZL8 1130 aaKnown RBP12.07□□□□□ -0.48
NPHP1-202ENST00000355301 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
NPHP1-202ENST00000355301 INTS5Q6P9B9 1019 aaKnown RBP12.06□□□□□ -0.48
NPHP1-202ENST00000355301 SIRT2Q8IXJ6 389 aa12.06□□□□□ -0.48
NPHP1-202ENST00000355301 UBTFL1P0CB47 393 aaPredicted RBP12.05□□□□□ -0.48
NPHP1-202ENST00000355301 CRKLP46109 303 aaKnown RBP12.05□□□□□ -0.48
NPHP1-202ENST00000355301 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
NPHP1-202ENST00000355301 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
NPHP1-202ENST00000355301 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
NPHP1-202ENST00000355301 UTYO14607 1347 aa12.05□□□□□ -0.48
NPHP1-202ENST00000355301 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
NPHP1-202ENST00000355301 NEURL1BA8MQ27 555 aa12.05□□□□□ -0.48
NPHP1-202ENST00000355301 NBPF7P0C2Y1 421 aaPredicted RBP12.05□□□□□ -0.48
NPHP1-202ENST00000355301 POTEAQ6S8J7 498 aa12.05□□□□□ -0.48
NPHP1-202ENST00000355301 MYD88Q99836 296 aa12.05□□□□□ -0.48
NPHP1-202ENST00000355301 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
NPHP1-202ENST00000355301 SMC5Q8IY18 1101 aa12.04□□□□□ -0.48
NPHP1-202ENST00000355301 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
NPHP1-202ENST00000355301 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
NPHP1-202ENST00000355301 GRM8O00222 908 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 GCKRQ14397 625 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 KIF6Q6ZMV9 814 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 LINC00116Q8NCU8 138 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 C9orf78Q9NZ63 289 aaPredicted RBP12.03□□□□□ -0.48
NPHP1-202ENST00000355301 MAP3K15Q6ZN16 1313 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 CNTNAP4Q9C0A0 1308 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 CCNL1Q9UK58 526 aaPredicted RBP12.03□□□□□ -0.48
NPHP1-202ENST00000355301 HDAC5Q9UQL6 1122 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
NPHP1-202ENST00000355301 TAF1LQ8IZX4 1826 aa12.03□□□□□ -0.48
NPHP1-202ENST00000355301 ERVV-1B6SEH8 477 aa12.02□□□□□ -0.49
NPHP1-202ENST00000355301 TRIM37O94972 964 aa12.02□□□□□ -0.49
NPHP1-202ENST00000355301 RC3H1Q5TC82 1133 aaKnown RBP12.02□□□□□ -0.49
NPHP1-202ENST00000355301 NPM2Q86SE8 214 aaKnown RBP12.02□□□□□ -0.49
NPHP1-202ENST00000355301 GCC1Q96CN9 775 aa12.02□□□□□ -0.49
NPHP1-202ENST00000355301 ATP5J2-PTCD1G3V325 749 aa12.01□□□□□ -0.49
NPHP1-202ENST00000355301 TRIM28Q13263 835 aaKnown RBP12.01□□□□□ -0.49
NPHP1-202ENST00000355301 TCIRG1Q13488 830 aa12.01□□□□□ -0.49
NPHP1-202ENST00000355301 GIGYF2Q6Y7W6 1299 aaKnown RBP12.01□□□□□ -0.49
NPHP1-202ENST00000355301 HMMRO75330 724 aa12.01□□□□□ -0.49
NPHP1-202ENST00000355301 KCNQ4P56696 695 aa12.01□□□□□ -0.49
NPHP1-202ENST00000355301 ATP8B2P98198 1209 aa12.01□□□□□ -0.49
NPHP1-202ENST00000355301 DZIP3Q86Y13 1208 aaKnown RBP12.01□□□□□ -0.49
NPHP1-202ENST00000355301 CCDC191Q8NCU4 936 aa12.01□□□□□ -0.49
NPHP1-202ENST00000355301 ISCA1Q9BUE6 129 aa12.01□□□□□ -0.49
NPHP1-202ENST00000355301 DCTPP1Q9H773 170 aa12.01□□□□□ -0.49
NPHP1-202ENST00000355301 HSP90AB3PQ58FF7 597 aa12□□□□□ -0.49
NPHP1-202ENST00000355301 CWC25Q9NXE8 425 aaPredicted RBP12□□□□□ -0.49
NPHP1-202ENST00000355301 COL15A1P39059 1388 aa12□□□□□ -0.49
NPHP1-202ENST00000355301 ANKRD36CQ5JPF3 1778 aa12□□□□□ -0.49
NPHP1-202ENST00000355301 NUP98P52948 1817 aa12□□□□□ -0.49
NPHP1-202ENST00000355301 MTX1Q13505 466 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 HLFQ16534 295 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 ARXQ96QS3 562 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 PDZRN3Q9UPQ7 1066 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 TBC1D2BQ9UPU7 963 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 C4BP0C0L5 1744 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 A0A087WZG4 1122 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 PNMA6EA0A0J9YXQ4 647 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 SLC27A3Q5K4L6 730 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
NPHP1-202ENST00000355301 H7C1W4 665 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 CASP7P55210 303 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 NUCB1Q02818 461 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 POLA2Q14181 598 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 SKAP1Q86WV1 359 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 LRRC4BQ9NT99 713 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 PLSCR1O15162 318 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 RPS6KA4O75676 772 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 UBE3BQ7Z3V4 1068 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 PPP1R42Q7Z4L9 355 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 BCORQ6W2J9 1755 aa11.98□□□□□ -0.49
NPHP1-202ENST00000355301 RGL2O15211 777 aa11.97□□□□□ -0.49
NPHP1-202ENST00000355301 SRGAP3O43295 1099 aa11.97□□□□□ -0.49
NPHP1-202ENST00000355301 HMGB2P26583 209 aaKnown RBP11.97□□□□□ -0.49
NPHP1-202ENST00000355301 BICC1Q9H694 974 aaKnown RBP11.97□□□□□ -0.49
NPHP1-202ENST00000355301 GNPATO15228 680 aa11.96□□□□□ -0.49
NPHP1-202ENST00000355301 NLRP10Q86W26 655 aa11.96□□□□□ -0.49
NPHP1-202ENST00000355301 CHD1LQ86WJ1 897 aa11.96□□□□□ -0.49
NPHP1-202ENST00000355301 ZNF34Q8IZ26 560 aa11.96□□□□□ -0.49
NPHP1-202ENST00000355301 TNS1Q9HBL0 1735 aaKnown RBP11.96□□□□□ -0.49
NPHP1-202ENST00000355301 RABL6Q3YEC7 729 aaPredicted RBP11.96□□□□□ -0.5
NPHP1-202ENST00000355301 ANKRD45Q5TZF3 282 aa11.96□□□□□ -0.5
NPHP1-202ENST00000355301 CLEC4GQ6UXB4 293 aa11.96□□□□□ -0.5
NPHP1-202ENST00000355301 RTCBQ9Y3I0 505 aaKnown RBP11.96□□□□□ -0.5
NPHP1-202ENST00000355301 SCN7AQ01118 1682 aa11.95□□□□□ -0.5
NPHP1-202ENST00000355301 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
NPHP1-202ENST00000355301 RGPD4Q7Z3J3 1758 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 355.8 ms