RNA–Protein interactions for RNA: ENST00000355123.8

ITSN2-201, Transcript of intersectin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ITSN2, Length 6,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-201ENST00000355123 WDR78Q5VTH9 848 aa19.54■□□□□ 0.72
ITSN2-201ENST00000355123 ZNF444Q8N0Y2 327 aaPredicted RBP19.54■□□□□ 0.72
ITSN2-201ENST00000355123 MMRN2Q9H8L6 949 aa19.54■□□□□ 0.72
ITSN2-201ENST00000355123 CTCFLQ8NI51 663 aaPredicted RBP19.54■□□□□ 0.72
ITSN2-201ENST00000355123 MAP3K2Q9Y2U5 619 aa19.54■□□□□ 0.72
ITSN2-201ENST00000355123 ATP5J2-PTCD1G3V325 749 aa19.53■□□□□ 0.72
ITSN2-201ENST00000355123 POTEJP0CG39 1038 aa19.53■□□□□ 0.72
ITSN2-201ENST00000355123 TNIP1Q15025 636 aa19.53■□□□□ 0.72
ITSN2-201ENST00000355123 CALCOCO1Q9P1Z2 691 aa19.53■□□□□ 0.72
ITSN2-201ENST00000355123 ADCY5O95622 1261 aa19.53■□□□□ 0.72
ITSN2-201ENST00000355123 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
ITSN2-201ENST00000355123 FAM83GA6ND36 823 aa19.53■□□□□ 0.72
ITSN2-201ENST00000355123 MAP3K12Q12852 859 aa19.52■□□□□ 0.72
ITSN2-201ENST00000355123 SLC5A1P13866 664 aa19.52■□□□□ 0.71
ITSN2-201ENST00000355123 SMC1AQ14683 1233 aaKnown RBP19.52■□□□□ 0.71
ITSN2-201ENST00000355123 HSP90AA4PQ58FG1 418 aa19.52■□□□□ 0.71
ITSN2-201ENST00000355123 DNAAF4Q8WXU2 420 aa19.52■□□□□ 0.71
ITSN2-201ENST00000355123 SLC52A1Q9NWF4 448 aa19.52■□□□□ 0.71
ITSN2-201ENST00000355123 LIMCH1Q9UPQ0 1083 aa19.52■□□□□ 0.71
ITSN2-201ENST00000355123 TBC1D9Q6ZT07 1266 aa19.51■□□□□ 0.71
ITSN2-201ENST00000355123 STAMBPO95630 424 aa19.51■□□□□ 0.71
ITSN2-201ENST00000355123 TRIM27P14373 513 aa19.51■□□□□ 0.71
ITSN2-201ENST00000355123 DRC1Q96MC2 740 aa19.51■□□□□ 0.71
ITSN2-201ENST00000355123 SCAND2PQ9GZW5 306 aaPredicted RBP19.51■□□□□ 0.71
ITSN2-201ENST00000355123 A0A087WZG4 1122 aa19.5■□□□□ 0.71
ITSN2-201ENST00000355123 GCOM1H8Y6P7 765 aaPredicted RBP19.5■□□□□ 0.71
ITSN2-201ENST00000355123 MYZAPP0CAP1 466 aa19.5■□□□□ 0.71
ITSN2-201ENST00000355123 CCDC175P0C221 793 aa19.5■□□□□ 0.71
ITSN2-201ENST00000355123 MTIF2P46199 727 aaKnown RBP19.5■□□□□ 0.71
ITSN2-201ENST00000355123 ZNF652Q9Y2D9 606 aa19.5■□□□□ 0.71
ITSN2-201ENST00000355123 NESP48681 1621 aa19.5■□□□□ 0.71
ITSN2-201ENST00000355123 CCDC194A0A1B0GVG4 234 aa19.5■□□□□ 0.71
ITSN2-201ENST00000355123 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
ITSN2-201ENST00000355123 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
ITSN2-201ENST00000355123 TCERG1LQ5VWI1 586 aa19.49■□□□□ 0.71
ITSN2-201ENST00000355123 MICU3Q86XE3 530 aa19.49■□□□□ 0.71
ITSN2-201ENST00000355123 ZMYND15Q9H091 742 aa19.49■□□□□ 0.71
ITSN2-201ENST00000355123 CCDC61Q9Y6R9 512 aa19.49■□□□□ 0.71
ITSN2-201ENST00000355123 FBLN1P23142 703 aa19.49■□□□□ 0.71
ITSN2-201ENST00000355123 MICALCLQ6ZW33 695 aa19.49■□□□□ 0.71
ITSN2-201ENST00000355123 IQCA1Q86XH1 822 aa19.49■□□□□ 0.71
ITSN2-201ENST00000355123 IGHDP01880 384 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 ANXA1P04083 346 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 ZNF287Q9HBT7 754 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 ANKRD18BA2A2Z9 1011 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 TMEM266Q2M3C6 531 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 ALDH1L2Q3SY69 923 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 TTLL12Q14166 644 aaPredicted RBP19.48■□□□□ 0.71
ITSN2-201ENST00000355123 LRRC2Q9BYS8 371 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 TMEM67Q5HYA8 995 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 CEP135Q66GS9 1140 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 PPP4R3AQ6IN85 833 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 CUL5Q93034 780 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 PAIP2Q9BPZ3 127 aaKnown RBP19.48■□□□□ 0.71
ITSN2-201ENST00000355123 NECAB1Q8N987 351 aa19.48■□□□□ 0.71
ITSN2-201ENST00000355123 MNAT1P51948 309 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 CATIPQ7Z7H3 387 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 USP16Q9Y5T5 823 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 YEATS4O95619 227 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 CTNNA2P26232 953 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 SNW1Q13573 536 aaKnown RBP19.47■□□□□ 0.71
ITSN2-201ENST00000355123 KCNH5Q8NCM2 988 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 RPGRQ92834 1020 aaKnown RBP19.47■□□□□ 0.71
ITSN2-201ENST00000355123 SLC26A6Q9BXS9 759 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 JADE2Q9NQC1 790 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 PAFAH1B1P43034 410 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 IDEP14735 1019 aa19.47■□□□□ 0.71
ITSN2-201ENST00000355123 CCDC196A0A1B0GTZ2 297 aa19.46■□□□□ 0.71
ITSN2-201ENST00000355123 STX6O43752 255 aa19.46■□□□□ 0.71
ITSN2-201ENST00000355123 MYO1BO43795 1136 aa19.46■□□□□ 0.71
ITSN2-201ENST00000355123 CETN2P41208 172 aa19.46■□□□□ 0.71
ITSN2-201ENST00000355123 NOP2P46087 812 aaKnown RBP19.46■□□□□ 0.71
ITSN2-201ENST00000355123 GIMAP6Q6P9H5 292 aa19.46■□□□□ 0.71
ITSN2-201ENST00000355123 COMMD10Q9Y6G5 202 aa19.46■□□□□ 0.71
ITSN2-201ENST00000355123 CCDC40Q4G0X9 1142 aa19.46■□□□□ 0.71
ITSN2-201ENST00000355123 PLEKHH2Q8IVE3 1493 aa19.46■□□□□ 0.71
ITSN2-201ENST00000355123 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.45■□□□□ 0.7
ITSN2-201ENST00000355123 V9GYY5 206 aaPredicted RBP19.45■□□□□ 0.7
ITSN2-201ENST00000355123 TROQ12816 1431 aaPredicted RBP19.45■□□□□ 0.7
ITSN2-201ENST00000355123 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
ITSN2-201ENST00000355123 FLIIQ13045 1269 aa19.45■□□□□ 0.7
ITSN2-201ENST00000355123 ARHGEF11O15085 1522 aa19.45■□□□□ 0.7
ITSN2-201ENST00000355123 HMGB1P09429 215 aaKnown RBP19.45■□□□□ 0.7
ITSN2-201ENST00000355123 STX1AQ16623 288 aa19.45■□□□□ 0.7
ITSN2-201ENST00000355123 HOOK3Q86VS8 718 aa19.45■□□□□ 0.7
ITSN2-201ENST00000355123 PUF60Q9UHX1 559 aaKnown RBP19.45■□□□□ 0.7
ITSN2-201ENST00000355123 KIF2AO00139 706 aaPredicted RBP19.45■□□□□ 0.7
ITSN2-201ENST00000355123 GTF2A1P52655 376 aaPredicted RBP19.45■□□□□ 0.7
ITSN2-201ENST00000355123 VPS36Q86VN1 386 aa19.45■□□□□ 0.7
ITSN2-201ENST00000355123 RSPH14Q9UHP6 348 aa19.45■□□□□ 0.7
ITSN2-201ENST00000355123 FOXO3O43524 673 aa19.44■□□□□ 0.7
ITSN2-201ENST00000355123 USO1O60763 962 aaKnown RBP19.44■□□□□ 0.7
ITSN2-201ENST00000355123 CCDC12Q8WUD4 166 aaPredicted RBP19.44■□□□□ 0.7
ITSN2-201ENST00000355123 APBB1IPQ7Z5R6 666 aaPredicted RBP19.44■□□□□ 0.7
ITSN2-201ENST00000355123 EVI5LQ96CN4 794 aa19.44■□□□□ 0.7
ITSN2-201ENST00000355123 TCEANC2Q96MN5 208 aa19.44■□□□□ 0.7
ITSN2-201ENST00000355123 RPGRIP1LQ68CZ1 1315 aa19.44■□□□□ 0.7
ITSN2-201ENST00000355123 IGSF3O75054 1194 aa19.44■□□□□ 0.7
ITSN2-201ENST00000355123 MCM3P25205 808 aa19.43■□□□□ 0.7
ITSN2-201ENST00000355123 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms