RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 ZNF804AQ7Z570 1209 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 SDF4Q9BRK5 362 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
GABPA-201ENST00000354828 GSTO1P78417 241 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 KRT32Q14532 448 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 RBM17Q96I25 401 aaKnown RBP11.5□□□□□ -0.57
GABPA-201ENST00000354828 GOLIM4O00461 696 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 CDKL5O76039 1030 aa11.5□□□□□ -0.57
GABPA-201ENST00000354828 IPO7O95373 1038 aaKnown RBP11.5□□□□□ -0.57
GABPA-201ENST00000354828 JAKMIP1Q96N16 626 aaKnown RBP11.5□□□□□ -0.57
GABPA-201ENST00000354828 GOLGA6L3A6NEY3 463 aa11.49□□□□□ -0.57
GABPA-201ENST00000354828 IQCA1Q86XH1 822 aa11.49□□□□□ -0.57
GABPA-201ENST00000354828 UGGT1Q9NYU2 1555 aa11.49□□□□□ -0.57
GABPA-201ENST00000354828 UQCRFS1P1P0C7P4 283 aa11.49□□□□□ -0.57
GABPA-201ENST00000354828 NLRP1Q9C000 1473 aa11.49□□□□□ -0.57
GABPA-201ENST00000354828 H0YIN7 160 aa11.49□□□□□ -0.57
GABPA-201ENST00000354828 STK38Q15208 465 aa11.49□□□□□ -0.57
GABPA-201ENST00000354828 MCM2P49736 904 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 CEBPZQ03701 1054 aaKnown RBP11.48□□□□□ -0.57
GABPA-201ENST00000354828 ATP2B3Q16720 1220 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 CCDC87Q9NVE4 849 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 ERVK-7P63135 1459 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 COL17A1Q9UMD9 1497 aaPredicted RBP11.48□□□□□ -0.57
GABPA-201ENST00000354828 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 PLEKHG1Q9ULL1 1385 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 IL16Q14005 1332 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 NAP1L5Q96NT1 182 aaPredicted RBP11.48□□□□□ -0.57
GABPA-201ENST00000354828 NOL7Q9UMY1 257 aaKnown RBP11.48□□□□□ -0.57
GABPA-201ENST00000354828 RABEP1Q15276 862 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 ZGPATQ8N5A5 531 aaKnown RBP11.48□□□□□ -0.57
GABPA-201ENST00000354828 ASXL1Q8IXJ9 1541 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 GRM8O00222 908 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 SSBP05455 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
GABPA-201ENST00000354828 SASS6Q6UVJ0 657 aa11.48□□□□□ -0.57
GABPA-201ENST00000354828 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 MSL1Q68DK7 614 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 CTCFLQ8NI51 663 aaPredicted RBP11.47□□□□□ -0.57
GABPA-201ENST00000354828 CARD14Q9BXL6 1004 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
GABPA-201ENST00000354828 TRIM27P14373 513 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 CHMP5Q9NZZ3 219 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 CT47A1Q5JQC4 288 aaPredicted RBP11.47□□□□□ -0.57
GABPA-201ENST00000354828 ZNF790Q6PG37 636 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 SCLT1Q96NL6 688 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 PDRG1Q9NUG6 133 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 PIK3C2GO75747 1445 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 EDC4Q6P2E9 1401 aaKnown RBP11.47□□□□□ -0.57
GABPA-201ENST00000354828 ZNF213O14771 459 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 TNIP1Q15025 636 aa11.47□□□□□ -0.57
GABPA-201ENST00000354828 ZNF396Q96N95 335 aaPredicted RBP11.47□□□□□ -0.57
GABPA-201ENST00000354828 PICALMQ13492 652 aa11.46□□□□□ -0.57
GABPA-201ENST00000354828 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
GABPA-201ENST00000354828 CRNKL1Q9BZJ0 848 aaKnown RBP11.46□□□□□ -0.57
GABPA-201ENST00000354828 ALDH1L1O75891 902 aa11.46□□□□□ -0.57
GABPA-201ENST00000354828 TRIM37O94972 964 aa11.46□□□□□ -0.57
GABPA-201ENST00000354828 OLFM4Q6UX06 510 aa11.46□□□□□ -0.57
GABPA-201ENST00000354828 HELBQ8NG08 1087 aaPredicted RBP11.46□□□□□ -0.57
GABPA-201ENST00000354828 C8orf58Q8NAV2 365 aa11.46□□□□□ -0.58
GABPA-201ENST00000354828 CUL5Q93034 780 aa11.46□□□□□ -0.58
GABPA-201ENST00000354828 PHACTR3Q96KR7 559 aa11.46□□□□□ -0.58
GABPA-201ENST00000354828 NKTRP30414 1462 aaKnown RBP11.46□□□□□ -0.58
GABPA-201ENST00000354828 OFD1O75665 1012 aa11.46□□□□□ -0.58
GABPA-201ENST00000354828 PDE4BQ07343 736 aa11.46□□□□□ -0.58
GABPA-201ENST00000354828 ECHDC1Q9NTX5 307 aa11.46□□□□□ -0.58
GABPA-201ENST00000354828 PLEKHH1Q9ULM0 1364 aa11.46□□□□□ -0.58
GABPA-201ENST00000354828 GCC2Q8IWJ2 1684 aa11.46□□□□□ -0.58
GABPA-201ENST00000354828 JMYQ8N9B5 988 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 ZNF408Q9H9D4 720 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 BCS1LQ9Y276 419 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 ABCA9Q8IUA7 1624 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 FAM196AQ6ZSG2 479 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 KRT27Q7Z3Y8 459 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 DNAJC10Q8IXB1 793 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 TSPY2A6NKD2 308 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 ZFYVE9O95405 1425 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 METP08581 1390 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 CDC42BPAQ5VT25 1732 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 CYP7A1P22680 504 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
GABPA-201ENST00000354828 PARP10Q53GL7 1025 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 FLAD1Q8NFF5 587 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 LINS1Q8NG48 757 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 WASF1Q92558 559 aa11.45□□□□□ -0.58
GABPA-201ENST00000354828 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
GABPA-201ENST00000354828 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
GABPA-201ENST00000354828 PRPF40BQ6NWY9 871 aaKnown RBP11.44□□□□□ -0.58
GABPA-201ENST00000354828 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
GABPA-201ENST00000354828 CCDC82Q8N4S0 544 aa11.44□□□□□ -0.58
GABPA-201ENST00000354828 A0A0U1RQG5 324 aaPredicted RBP11.44□□□□□ -0.58
GABPA-201ENST00000354828 ODF2Q5BJF6 829 aa11.44□□□□□ -0.58
GABPA-201ENST00000354828 ABCC3O15438 1527 aa11.44□□□□□ -0.58
GABPA-201ENST00000354828 PAF1Q8N7H5 531 aa11.44□□□□□ -0.58
GABPA-201ENST00000354828 SLC52A2Q9HAB3 445 aa11.44□□□□□ -0.58
GABPA-201ENST00000354828 MATR3P43243 847 aaKnown RBP eCLIP11.44□□□□□ -0.58
GABPA-201ENST00000354828 CWF19L2Q2TBE0 894 aaKnown RBP11.44□□□□□ -0.58
GABPA-201ENST00000354828 SHROOM2Q13796 1616 aa11.43□□□□□ -0.58
GABPA-201ENST00000354828 IFIT3O14879 490 aaKnown RBP11.43□□□□□ -0.58
GABPA-201ENST00000354828 A1BGP04217 495 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms