RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ZNF500O60304 480 aaPredicted RBP13.14□□□□□ -0.31
SND1-201ENST00000354725 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
SND1-201ENST00000354725 FLT4P35916 1363 aa13.14□□□□□ -0.31
SND1-201ENST00000354725 NUTM2BA6NNL0 878 aaPredicted RBP13.14□□□□□ -0.31
SND1-201ENST00000354725 NUTM2EB1AL46 878 aaPredicted RBP13.14□□□□□ -0.31
SND1-201ENST00000354725 NUTM2AQ8IVF1 878 aaPredicted RBP13.14□□□□□ -0.31
SND1-201ENST00000354725 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 CRB1P82279 1406 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 IL13P35225 146 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
SND1-201ENST00000354725 VPS72Q15906 364 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 ERBB3P21860 1342 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
SND1-201ENST00000354725 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
SND1-201ENST00000354725 RAB3GAP1Q15042 981 aa13.12□□□□□ -0.31
SND1-201ENST00000354725 EMILIN1Q9Y6C2 1016 aa13.12□□□□□ -0.31
SND1-201ENST00000354725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
SND1-201ENST00000354725 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
SND1-201ENST00000354725 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
SND1-201ENST00000354725 CHRNA2Q15822 529 aa13.12□□□□□ -0.31
SND1-201ENST00000354725 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
SND1-201ENST00000354725 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
SND1-201ENST00000354725 CAPN2P17655 700 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 LOC102724159A0A0B4J2E5 919 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
SND1-201ENST00000354725 PWP2Q15269 919 aaKnown RBP13.11□□□□□ -0.31
SND1-201ENST00000354725 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 C8orf37Q96NL8 207 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 SPATA31A1Q5TZJ5 1347 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 WDR17Q8IZU2 1322 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
SND1-201ENST00000354725 TULP2O00295 520 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
SND1-201ENST00000354725 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
SND1-201ENST00000354725 PHACTR3Q96KR7 559 aa13.1□□□□□ -0.31
SND1-201ENST00000354725 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
SND1-201ENST00000354725 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
SND1-201ENST00000354725 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
SND1-201ENST00000354725 EGFL6Q8IUX8 553 aa13.1□□□□□ -0.31
SND1-201ENST00000354725 FOSBP53539 338 aa13.09□□□□□ -0.31
SND1-201ENST00000354725 GAS2L3Q86XJ1 694 aa13.09□□□□□ -0.31
SND1-201ENST00000354725 ZNF710Q8N1W2 664 aa13.09□□□□□ -0.31
SND1-201ENST00000354725 CACNA1FO60840 1977 aa13.09□□□□□ -0.31
SND1-201ENST00000354725 KDRP35968 1356 aa13.09□□□□□ -0.31
SND1-201ENST00000354725 AK9Q5TCS8 1911 aa13.08□□□□□ -0.31
SND1-201ENST00000354725 CCDC66A2RUB6 948 aa13.08□□□□□ -0.31
SND1-201ENST00000354725 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.31
SND1-201ENST00000354725 PRDM11Q9NQV5 511 aa13.08□□□□□ -0.31
SND1-201ENST00000354725 USP21Q9UK80 565 aa13.08□□□□□ -0.31
SND1-201ENST00000354725 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
SND1-201ENST00000354725 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
SND1-201ENST00000354725 PRKAR2BP31323 418 aa13.08□□□□□ -0.32
SND1-201ENST00000354725 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
SND1-201ENST00000354725 MEGF6O75095 1541 aa13.08□□□□□ -0.32
SND1-201ENST00000354725 GOLIM4O00461 696 aa13.08□□□□□ -0.32
SND1-201ENST00000354725 HS1BP3Q53T59 392 aa13.08□□□□□ -0.32
SND1-201ENST00000354725 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
SND1-201ENST00000354725 TSPYL1Q9H0U9 437 aa13.08□□□□□ -0.32
SND1-201ENST00000354725 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
SND1-201ENST00000354725 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
SND1-201ENST00000354725 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
SND1-201ENST00000354725 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
SND1-201ENST00000354725 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
SND1-201ENST00000354725 BANK1Q8NDB2 785 aa13.07□□□□□ -0.32
SND1-201ENST00000354725 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
SND1-201ENST00000354725 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
SND1-201ENST00000354725 MBIPQ9NS73 344 aa13.07□□□□□ -0.32
SND1-201ENST00000354725 TBC1D9Q6ZT07 1266 aa13.07□□□□□ -0.32
SND1-201ENST00000354725 IGSF1Q8N6C5 1336 aa13.06□□□□□ -0.32
SND1-201ENST00000354725 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
SND1-201ENST00000354725 ADRA2BP18089 450 aa13.06□□□□□ -0.32
SND1-201ENST00000354725 EIF4A2Q14240 407 aaKnown RBP13.06□□□□□ -0.32
SND1-201ENST00000354725 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
SND1-201ENST00000354725 KIF3AQ9Y496 699 aa13.06□□□□□ -0.32
SND1-201ENST00000354725 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
SND1-201ENST00000354725 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
SND1-201ENST00000354725 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
SND1-201ENST00000354725 GNAI1P63096 354 aa13.05□□□□□ -0.32
SND1-201ENST00000354725 ANKRD24Q8TF21 1146 aa13.05□□□□□ -0.32
SND1-201ENST00000354725 LNPKQ9C0E8 428 aa13.05□□□□□ -0.32
SND1-201ENST00000354725 BCL9O00512 1426 aa13.05□□□□□ -0.32
SND1-201ENST00000354725 CYP2E1P05181 493 aaPredicted RBP13.05□□□□□ -0.32
SND1-201ENST00000354725 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
SND1-201ENST00000354725 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
SND1-201ENST00000354725 THRAP3Q9Y2W1 955 aaKnown RBP13.05□□□□□ -0.32
SND1-201ENST00000354725 NHSQ6T4R5 1651 aa13.05□□□□□ -0.32
SND1-201ENST00000354725 INTS3Q68E01 1043 aaKnown RBP13.05□□□□□ -0.32
SND1-201ENST00000354725 TRPC5Q9UL62 973 aaPredicted RBP13.05□□□□□ -0.32
SND1-201ENST00000354725 RGPD3A6NKT7 1758 aaPredicted RBP13.05□□□□□ -0.32
SND1-201ENST00000354725 RGPD4Q7Z3J3 1758 aa13.05□□□□□ -0.32
SND1-201ENST00000354725 SCN11AQ9UI33 1791 aa13.05□□□□□ -0.32
SND1-201ENST00000354725 NBPF6Q5VWK0 638 aa13.04□□□□□ -0.32
SND1-201ENST00000354725 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
SND1-201ENST00000354725 CEP120Q8N960 986 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms