RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-202ENST00000354537 ZNF710Q8N1W2 664 aa13.64□□□□□ -0.23
CAPN9-202ENST00000354537 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-202ENST00000354537 HIP1O00291 1037 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 SRGAP3O43295 1099 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 PDCP20941 246 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 SNRKQ9NRH2 765 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 DIP2BQ9P265 1576 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 CHD2O14647 1828 aaKnown RBP13.63□□□□□ -0.23
CAPN9-202ENST00000354537 FIBPO43427 364 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 CASTP20810 708 aaKnown RBP13.63□□□□□ -0.23
CAPN9-202ENST00000354537 ERC1Q8IUD2 1116 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 FAM200AQ8TCP9 573 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 GPATCH3Q96I76 525 aa13.63□□□□□ -0.23
CAPN9-202ENST00000354537 ADGRL3Q9HAR2 1447 aa13.62□□□□□ -0.23
CAPN9-202ENST00000354537 SYCP1Q15431 976 aa13.62□□□□□ -0.23
CAPN9-202ENST00000354537 BEND3Q5T5X7 828 aa13.62□□□□□ -0.23
CAPN9-202ENST00000354537 TCHHQ07283 1943 aa13.62□□□□□ -0.23
CAPN9-202ENST00000354537 DNM1Q05193 864 aaKnown RBP13.62□□□□□ -0.23
CAPN9-202ENST00000354537 GIMAP6Q6P9H5 292 aa13.62□□□□□ -0.23
CAPN9-202ENST00000354537 ESF1Q9H501 851 aaKnown RBP13.62□□□□□ -0.23
CAPN9-202ENST00000354537 CEMIPQ8WUJ3 1361 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 MED1Q15648 1581 aaPredicted RBP13.61□□□□□ -0.23
CAPN9-202ENST00000354537 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
CAPN9-202ENST00000354537 PSMA5P28066 241 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 KRT85P78386 507 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 DMTNQ08495 405 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 NECTIN1Q15223 517 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 ANKRD1Q15327 319 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 CWC27Q6UX04 472 aaKnown RBP13.61□□□□□ -0.23
CAPN9-202ENST00000354537 CLASRPQ8N2M8 674 aaKnown RBP13.61□□□□□ -0.23
CAPN9-202ENST00000354537 EVI5LQ96CN4 794 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 ECHDC1Q9NTX5 307 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 CTIFO43310 598 aaKnown RBP13.61□□□□□ -0.23
CAPN9-202ENST00000354537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.61□□□□□ -0.23
CAPN9-202ENST00000354537 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 DNAAF4Q8WXU2 420 aa13.61□□□□□ -0.23
CAPN9-202ENST00000354537 GTPBP4Q9BZE4 634 aaKnown RBP13.61□□□□□ -0.23
CAPN9-202ENST00000354537 CAVIN2O95810 425 aa13.6□□□□□ -0.23
CAPN9-202ENST00000354537 HOXC9P31274 260 aa13.6□□□□□ -0.23
CAPN9-202ENST00000354537 MAP3K11Q16584 847 aa13.6□□□□□ -0.23
CAPN9-202ENST00000354537 ANKRD7Q92527 254 aa13.6□□□□□ -0.23
CAPN9-202ENST00000354537 JAKMIP1Q96N16 626 aaKnown RBP13.6□□□□□ -0.23
CAPN9-202ENST00000354537 KCNF1Q9H3M0 494 aa13.6□□□□□ -0.23
CAPN9-202ENST00000354537 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
CAPN9-202ENST00000354537 ALDH1L1O75891 902 aa13.59□□□□□ -0.23
CAPN9-202ENST00000354537 MAP4K4O95819 1239 aaPredicted RBP13.59□□□□□ -0.23
CAPN9-202ENST00000354537 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
CAPN9-202ENST00000354537 RBM43Q6ZSC3 357 aaKnown RBP13.59□□□□□ -0.23
CAPN9-202ENST00000354537 SCAND2PQ9GZW5 306 aaPredicted RBP13.59□□□□□ -0.23
CAPN9-202ENST00000354537 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
CAPN9-202ENST00000354537 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
CAPN9-202ENST00000354537 AP5Z1O43299 807 aa13.59□□□□□ -0.23
CAPN9-202ENST00000354537 LARGE1O95461 756 aa13.59□□□□□ -0.23
CAPN9-202ENST00000354537 NUP62CLQ9H1M0 184 aa13.59□□□□□ -0.23
CAPN9-202ENST00000354537 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
CAPN9-202ENST00000354537 DDX19AQ9NUU7 478 aaKnown RBP13.59□□□□□ -0.23
CAPN9-202ENST00000354537 SPG7Q9UQ90 795 aa13.59□□□□□ -0.23
CAPN9-202ENST00000354537 EIF4A1P60842 406 aaKnown RBP13.58□□□□□ -0.23
CAPN9-202ENST00000354537 NECTIN2Q92692 538 aa13.58□□□□□ -0.23
CAPN9-202ENST00000354537 MAP4K1Q92918 833 aa13.58□□□□□ -0.23
CAPN9-202ENST00000354537 NBPF7P0C2Y1 421 aaPredicted RBP13.58□□□□□ -0.24
CAPN9-202ENST00000354537 LARP1BQ659C4 914 aaKnown RBP13.58□□□□□ -0.24
CAPN9-202ENST00000354537 PTH1RQ03431 593 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 ST3GAL1Q11201 340 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 ME3Q16798 604 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
CAPN9-202ENST00000354537 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
CAPN9-202ENST00000354537 PYCARDQ9ULZ3 195 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 GIGYF1O75420 1035 aaPredicted RBP13.57□□□□□ -0.24
CAPN9-202ENST00000354537 ZSCAN20P17040 1043 aaPredicted RBP13.57□□□□□ -0.24
CAPN9-202ENST00000354537 TYRO3Q06418 890 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 ADCK5Q3MIX3 580 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 MRVI1Q9Y6F6 885 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 NPHP3Q7Z494 1330 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
CAPN9-202ENST00000354537 SOX12O15370 315 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 MLECQ14165 292 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 RNF20Q5VTR2 975 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 CREB3L3Q68CJ9 461 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 TTC6Q86TZ1 520 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 C17orf53Q8N3J3 647 aaPredicted RBP13.56□□□□□ -0.24
CAPN9-202ENST00000354537 PDCL2Q8N4E4 241 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 FEZ1Q99689 392 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
CAPN9-202ENST00000354537 OS9Q13438 667 aaPredicted RBP13.56□□□□□ -0.24
CAPN9-202ENST00000354537 TDRD7Q8NHU6 1098 aaKnown RBP13.56□□□□□ -0.24
CAPN9-202ENST00000354537 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
CAPN9-202ENST00000354537 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
CAPN9-202ENST00000354537 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
CAPN9-202ENST00000354537 CDC25BP30305 580 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
CAPN9-202ENST00000354537 PI4KAP2A4QPH2 592 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 PLA2G4DQ86XP0 818 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 MPNDQ8N594 471 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 PI4KAP1Q8N8J0 262 aa13.55□□□□□ -0.24
CAPN9-202ENST00000354537 CLSTN2Q9H4D0 955 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms