RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 MRC1P22897 1456 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 HMOX1P09601 288 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 IL13P35225 146 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 ST5P78524 1137 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
RTN3-204ENST00000354497 VSIG10Q8N0Z9 540 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 ANKRD31Q8N7Z5 1873 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 CNBD1Q8NA66 436 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 ABHD8Q96I13 439 aa15.21■□□□□ 0.03
RTN3-204ENST00000354497 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
RTN3-204ENST00000354497 FER1L6Q2WGJ9 1857 aa15.2■□□□□ 0.02
RTN3-204ENST00000354497 EIF5P55010 431 aaKnown RBP15.2■□□□□ 0.02
RTN3-204ENST00000354497 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
RTN3-204ENST00000354497 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
RTN3-204ENST00000354497 WBP1LQ9NX94 342 aa15.2■□□□□ 0.02
RTN3-204ENST00000354497 DICER1Q9UPY3 1922 aaKnown RBP15.2■□□□□ 0.02
RTN3-204ENST00000354497 STYK1Q6J9G0 422 aa15.19■□□□□ 0.02
RTN3-204ENST00000354497 SETDB2Q96T68 719 aa15.19■□□□□ 0.02
RTN3-204ENST00000354497 CACNA1SQ13698 1873 aa15.19■□□□□ 0.02
RTN3-204ENST00000354497 HSPA8P11142 646 aaKnown RBP15.18■□□□□ 0.02
RTN3-204ENST00000354497 PAXIP1Q6ZW49 1069 aaPredicted RBP15.18■□□□□ 0.02
RTN3-204ENST00000354497 HACL1Q9UJ83 578 aa15.18■□□□□ 0.02
RTN3-204ENST00000354497 ABT1Q9ULW3 272 aaKnown RBP15.18■□□□□ 0.02
RTN3-204ENST00000354497 SCN7AQ01118 1682 aa15.18■□□□□ 0.02
RTN3-204ENST00000354497 ZNF541Q9H0D2 1346 aa15.18■□□□□ 0.02
RTN3-204ENST00000354497 CCDC85CA6NKD9 419 aa15.17■□□□□ 0.02
RTN3-204ENST00000354497 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
RTN3-204ENST00000354497 DEFB115Q30KQ5 88 aa15.17■□□□□ 0.02
RTN3-204ENST00000354497 MASTLQ96GX5 879 aa15.17■□□□□ 0.02
RTN3-204ENST00000354497 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
RTN3-204ENST00000354497 ITGBL1O95965 494 aaPredicted RBP15.17■□□□□ 0.02
RTN3-204ENST00000354497 SRGNP10124 158 aa15.17■□□□□ 0.02
RTN3-204ENST00000354497 EPHX2P34913 555 aa15.17■□□□□ 0.02
RTN3-204ENST00000354497 GRM1Q13255 1194 aa15.17■□□□□ 0.02
RTN3-204ENST00000354497 CCDC93Q567U6 631 aa15.17■□□□□ 0.02
RTN3-204ENST00000354497 MAP1SQ66K74 1059 aaPredicted RBP15.17■□□□□ 0.02
RTN3-204ENST00000354497 ZNF277Q9NRM2 450 aaPredicted RBP15.17■□□□□ 0.02
RTN3-204ENST00000354497 SLX4Q8IY92 1834 aa15.16■□□□□ 0.02
RTN3-204ENST00000354497 MAP2K1Q02750 393 aaPredicted RBP15.16■□□□□ 0.02
RTN3-204ENST00000354497 RNF123Q5XPI4 1314 aa15.15■□□□□ 0.02
RTN3-204ENST00000354497 WDR33Q9C0J8 1336 aaKnown RBP15.15■□□□□ 0.02
RTN3-204ENST00000354497 RASSF10A6NK89 507 aa15.15■□□□□ 0.02
RTN3-204ENST00000354497 CNTROBQ8N137 903 aa15.15■□□□□ 0.02
RTN3-204ENST00000354497 ZNF496Q96IT1 587 aaPredicted RBP15.15■□□□□ 0.02
RTN3-204ENST00000354497 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
RTN3-204ENST00000354497 KNSTRNQ9Y448 316 aa15.15■□□□□ 0.02
RTN3-204ENST00000354497 SCN4AP35499 1836 aa15.15■□□□□ 0.02
RTN3-204ENST00000354497 UBR2Q8IWV8 1755 aa15.14■□□□□ 0.01
RTN3-204ENST00000354497 HEG1Q9ULI3 1381 aa15.14■□□□□ 0.01
RTN3-204ENST00000354497 VIRMAQ69YN4 1812 aaKnown RBP15.14■□□□□ 0.01
RTN3-204ENST00000354497 A1BGP04217 495 aa15.14■□□□□ 0.01
RTN3-204ENST00000354497 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
RTN3-204ENST00000354497 FKBP4Q02790 459 aaKnown RBP eCLIP15.14■□□□□ 0.01
RTN3-204ENST00000354497 MLLT1Q03111 559 aaPredicted RBP15.14■□□□□ 0.01
RTN3-204ENST00000354497 TEFQ10587 303 aa15.14■□□□□ 0.01
RTN3-204ENST00000354497 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
RTN3-204ENST00000354497 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
RTN3-204ENST00000354497 PNMA8AQ86V59 439 aaPredicted RBP15.13■□□□□ 0.01
RTN3-204ENST00000354497 DZIP3Q86Y13 1208 aaKnown RBP15.13■□□□□ 0.01
RTN3-204ENST00000354497 BEGAINQ9BUH8 593 aa15.13■□□□□ 0.01
RTN3-204ENST00000354497 TEX13AQ9BXU3 409 aaPredicted RBP15.13■□□□□ 0.01
RTN3-204ENST00000354497 OLFM4Q6UX06 510 aa15.12■□□□□ 0.01
RTN3-204ENST00000354497 FAM177BA6PVY3 158 aa15.11■□□□□ 0.01
RTN3-204ENST00000354497 NPR1P16066 1061 aa15.11■□□□□ 0.01
RTN3-204ENST00000354497 PIP4K2AP48426 406 aaPredicted RBP15.11■□□□□ 0.01
RTN3-204ENST00000354497 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
RTN3-204ENST00000354497 FMNL2Q96PY5 1086 aa15.11■□□□□ 0.01
RTN3-204ENST00000354497 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
RTN3-204ENST00000354497 ARFGEF2Q9Y6D5 1785 aa15.11■□□□□ 0.01
RTN3-204ENST00000354497 HSPA5P11021 654 aaKnown RBP15.1■□□□□ 0.01
RTN3-204ENST00000354497 IARSP41252 1262 aaKnown RBP15.09■□□□□ 0.01
RTN3-204ENST00000354497 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
RTN3-204ENST00000354497 RTKN2Q8IZC4 609 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 SYNE4Q8N205 404 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 C7orf43Q8WVR3 580 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 CAPNS2Q96L46 248 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 PCGF6Q9BYE7 350 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
RTN3-204ENST00000354497 ADAMTSL1Q8N6G6 1762 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 DIAPH1O60610 1272 aaKnown RBP15.09■□□□□ 0.01
RTN3-204ENST00000354497 LMOD1P29536 600 aaPredicted RBP15.09■□□□□ 0.01
RTN3-204ENST00000354497 CYP4F22Q6NT55 531 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 DDX21Q9NR30 783 aaKnown RBP eCLIP15.09■□□□□ 0.01
RTN3-204ENST00000354497 ZNF652Q9Y2D9 606 aa15.09■□□□□ 0.01
RTN3-204ENST00000354497 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
RTN3-204ENST00000354497 ECE1P42892 770 aa15.08■□□□□ 0
RTN3-204ENST00000354497 FMR1Q06787 632 aaKnown RBP eCLIP15.08■□□□□ 0
RTN3-204ENST00000354497 GPC2Q8N158 579 aa15.08■□□□□ 0
RTN3-204ENST00000354497 JDP2Q8WYK2 163 aa15.08■□□□□ 0
RTN3-204ENST00000354497 BCORQ6W2J9 1755 aa15.07■□□□□ 0
RTN3-204ENST00000354497 U2SURPO15042 1029 aaKnown RBP15.07■□□□□ 0
RTN3-204ENST00000354497 GTF2E1P29083 439 aaPredicted RBP15.07■□□□□ 0
RTN3-204ENST00000354497 EIF6P56537 245 aaKnown RBP15.07■□□□□ 0
RTN3-204ENST00000354497 IL17REQ8NFR9 667 aa15.07■□□□□ 0
RTN3-204ENST00000354497 GPR101Q96P66 508 aaPredicted RBP15.07■□□□□ 0
RTN3-204ENST00000354497 BTBD11A6QL63 1104 aa15.06■□□□□ 0
RTN3-204ENST00000354497 FZD9O00144 591 aa15.06■□□□□ 0
RTN3-204ENST00000354497 KCNQ3O43525 872 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms