RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 F13A1P00488 732 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 ANXA1P04083 346 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 C14orf37Q86TY3 774 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 PHF8Q9UPP1 1060 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 OS9Q13438 667 aaPredicted RBP29.48■■■□□ 2.31
CPNE1-202ENST00000352393 NCAPD2Q15021 1401 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 RUFY2Q8WXA3 655 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 KCNB2Q92953 911 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 HYPKQ9NX55 129 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 SMC3Q9UQE7 1217 aa29.48■■■□□ 2.31
CPNE1-202ENST00000352393 OVOS2A0A0G2JMS6 1433 aa29.47■■■□□ 2.31
CPNE1-202ENST00000352393 LARGE1O95461 756 aa29.47■■■□□ 2.31
CPNE1-202ENST00000352393 CASTP20810 708 aaKnown RBP29.47■■■□□ 2.31
CPNE1-202ENST00000352393 UBE2HP62256 183 aa29.47■■■□□ 2.31
CPNE1-202ENST00000352393 AKAP4Q5JQC9 854 aa29.47■■■□□ 2.31
CPNE1-202ENST00000352393 CLASRPQ8N2M8 674 aaKnown RBP29.47■■■□□ 2.31
CPNE1-202ENST00000352393 ECHDC1Q9NTX5 307 aa29.47■■■□□ 2.31
CPNE1-202ENST00000352393 BTBD11A6QL63 1104 aa29.46■■■□□ 2.31
CPNE1-202ENST00000352393 ALDH1L1O75891 902 aa29.46■■■□□ 2.31
CPNE1-202ENST00000352393 TEFQ10587 303 aa29.46■■■□□ 2.31
CPNE1-202ENST00000352393 PXDNQ92626 1479 aa29.46■■■□□ 2.31
CPNE1-202ENST00000352393 CPA1P15085 419 aa29.45■■■□□ 2.31
CPNE1-202ENST00000352393 PTH1RQ03431 593 aa29.45■■■□□ 2.31
CPNE1-202ENST00000352393 LARP6Q9BRS8 491 aaKnown RBP29.45■■■□□ 2.31
CPNE1-202ENST00000352393 TM6SF1Q9BZW5 370 aa29.45■■■□□ 2.31
CPNE1-202ENST00000352393 DBF4Q9UBU7 674 aaPredicted RBP29.45■■■□□ 2.31
CPNE1-202ENST00000352393 LETM1O95202 739 aaPredicted RBP29.45■■■□□ 2.3
CPNE1-202ENST00000352393 VPS53Q5VIR6 699 aa29.45■■■□□ 2.3
CPNE1-202ENST00000352393 ZNF530Q6P9A1 599 aaPredicted RBP29.45■■■□□ 2.3
CPNE1-202ENST00000352393 SIPA1L3O60292 1781 aaPredicted RBP29.45■■■□□ 2.3
CPNE1-202ENST00000352393 PLPPR3Q6T4P5 718 aa29.44■■■□□ 2.3
CPNE1-202ENST00000352393 ATP6V1DQ9Y5K8 247 aa29.44■■■□□ 2.3
CPNE1-202ENST00000352393 PDCL3Q9H2J4 239 aa29.44■■■□□ 2.3
CPNE1-202ENST00000352393 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.44■■■□□ 2.32e-10■□□□□ 8.4
CPNE1-202ENST00000352393 PTMAP06454 111 aaKnown RBP29.43■■■□□ 2.3
CPNE1-202ENST00000352393 ERC1Q8IUD2 1116 aa29.43■■■□□ 2.3
CPNE1-202ENST00000352393 ZSWIM6Q9HCJ5 1215 aa29.43■■■□□ 2.3
CPNE1-202ENST00000352393 HEG1Q9ULI3 1381 aa29.43■■■□□ 2.3
CPNE1-202ENST00000352393 KLHL34Q8N239 644 aa29.42■■■□□ 2.3
CPNE1-202ENST00000352393 GPATCH3Q96I76 525 aa29.42■■■□□ 2.3
CPNE1-202ENST00000352393 ADCK5Q3MIX3 580 aa29.42■■■□□ 2.3
CPNE1-202ENST00000352393 JAKMIP1Q96N16 626 aaKnown RBP29.42■■■□□ 2.3
CPNE1-202ENST00000352393 MAP3K2Q9Y2U5 619 aa29.42■■■□□ 2.3
CPNE1-202ENST00000352393 ZSCAN31Q96LW9 406 aaPredicted RBP29.41■■■□□ 2.3
CPNE1-202ENST00000352393 SH2B1Q9NRF2 756 aaPredicted RBP29.41■■■□□ 2.3
CPNE1-202ENST00000352393 PDRG1Q9NUG6 133 aa29.41■■■□□ 2.3
CPNE1-202ENST00000352393 CAMTA1Q9Y6Y1 1673 aa29.41■■■□□ 2.3
CPNE1-202ENST00000352393 PLEKHO1Q53GL0 409 aaPredicted RBP29.41■■■□□ 2.3
CPNE1-202ENST00000352393 PRPF40BQ6NWY9 871 aaKnown RBP29.41■■■□□ 2.3
CPNE1-202ENST00000352393 CCDC83Q8IWF9 413 aa29.41■■■□□ 2.3
CPNE1-202ENST00000352393 MTMR6Q9Y217 621 aa29.41■■■□□ 2.3
CPNE1-202ENST00000352393 GJB2P29033 226 aa29.4■■■□□ 2.3
CPNE1-202ENST00000352393 KSR2Q6VAB6 950 aa29.4■■■□□ 2.3
CPNE1-202ENST00000352393 MPRIPQ6WCQ1 1025 aa29.4■■■□□ 2.3
CPNE1-202ENST00000352393 EVI5LQ96CN4 794 aa29.4■■■□□ 2.3
CPNE1-202ENST00000352393 CCDC171Q6TFL3 1326 aa29.4■■■□□ 2.3
CPNE1-202ENST00000352393 RNMTO43148 476 aaKnown RBP29.39■■■□□ 2.3
CPNE1-202ENST00000352393 FIBPO43427 364 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 KIAA2012Q0VF49 1180 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 ST3GAL1Q11201 340 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 C9orf78Q9NZ63 289 aaPredicted RBP29.39■■■□□ 2.3
CPNE1-202ENST00000352393 PA2G4Q9UQ80 394 aaKnown RBP29.39■■■□□ 2.3
CPNE1-202ENST00000352393 UQCRHLA0A096LP55 91 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 UQCRHP07919 91 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 IFIT2P09913 472 aaKnown RBP29.39■■■□□ 2.3
CPNE1-202ENST00000352393 NECTIN1Q15223 517 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 PROSER3Q2NL68 480 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 KCNH5Q8NCM2 988 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 LRRC59Q96AG4 307 aaKnown RBP29.39■■■□□ 2.3
CPNE1-202ENST00000352393 CYP46A1Q9Y6A2 500 aa29.39■■■□□ 2.3
CPNE1-202ENST00000352393 USP25Q9UHP3 1055 aa29.38■■■□□ 2.29
CPNE1-202ENST00000352393 GIGYF1O75420 1035 aaPredicted RBP29.38■■■□□ 2.29
CPNE1-202ENST00000352393 FUCA2Q9BTY2 467 aa29.38■■■□□ 2.29
CPNE1-202ENST00000352393 ADAMTS7Q9UKP4 1686 aa29.38■■■□□ 2.29
CPNE1-202ENST00000352393 HDAC5Q9UQL6 1122 aa29.38■■■□□ 2.29
CPNE1-202ENST00000352393 HCLS1P14317 486 aaPredicted RBP29.37■■■□□ 2.29
CPNE1-202ENST00000352393 AMOTQ4VCS5 1084 aa29.37■■■□□ 2.29
CPNE1-202ENST00000352393 SASS6Q6UVJ0 657 aa29.37■■■□□ 2.29
CPNE1-202ENST00000352393 AACSQ86V21 672 aa29.36■■■□□ 2.29
CPNE1-202ENST00000352393 LMTK3Q96Q04 1460 aa29.36■■■□□ 2.29
CPNE1-202ENST00000352393 UTYO14607 1347 aa29.35■■■□□ 2.29
CPNE1-202ENST00000352393 CWF19L2Q2TBE0 894 aaKnown RBP29.35■■■□□ 2.29
CPNE1-202ENST00000352393 SNRKQ9NRH2 765 aa29.35■■■□□ 2.29
CPNE1-202ENST00000352393 SLIT3O75094 1523 aa29.35■■■□□ 2.29
CPNE1-202ENST00000352393 DNM1Q05193 864 aaKnown RBP29.34■■■□□ 2.29
CPNE1-202ENST00000352393 RBM8AQ9Y5S9 174 aaKnown RBP29.34■■■□□ 2.29
CPNE1-202ENST00000352393 ADCY5O95622 1261 aa29.33■■■□□ 2.29
CPNE1-202ENST00000352393 ME3Q16798 604 aa29.33■■■□□ 2.29
CPNE1-202ENST00000352393 CREB3L3Q68CJ9 461 aa29.33■■■□□ 2.29
CPNE1-202ENST00000352393 KAZALD1Q96I82 304 aa29.33■■■□□ 2.29
CPNE1-202ENST00000352393 MRC1P22897 1456 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 HIP1O00291 1037 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 ZKSCAN1P17029 563 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-202ENST00000352393 C1orf141Q5JVX7 400 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 LINS1Q8NG48 757 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 SUCLG2Q96I99 432 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 ZBTB7CA1YPR0 619 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 GRM8O00222 908 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 DYNC1I1O14576 645 aa29.32■■■□□ 2.28
CPNE1-202ENST00000352393 SASH1O94885 1247 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms