RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SLAIN2Q9P270 581 aa12.56□□□□□ -0.4
SMPD4-201ENST00000351288 HSP90AB4PQ58FF6 505 aa12.56□□□□□ -0.4
SMPD4-201ENST00000351288 ZCRB1Q8TBF4 217 aaKnown RBP12.56□□□□□ -0.4
SMPD4-201ENST00000351288 FMNL2Q96PY5 1086 aa12.56□□□□□ -0.4
SMPD4-201ENST00000351288 KDRP35968 1356 aa12.56□□□□□ -0.4
SMPD4-201ENST00000351288 STK3Q13188 491 aa12.56□□□□□ -0.4
SMPD4-201ENST00000351288 LARP1Q6PKG0 1096 aaKnown RBP12.55□□□□□ -0.4
SMPD4-201ENST00000351288 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
SMPD4-201ENST00000351288 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
SMPD4-201ENST00000351288 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
SMPD4-201ENST00000351288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-201ENST00000351288 DIP2AQ14689 1571 aa12.55□□□□□ -0.4
SMPD4-201ENST00000351288 REREQ9P2R6 1566 aa12.55□□□□□ -0.4
SMPD4-201ENST00000351288 VPS37CA5D8V6 355 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-201ENST00000351288 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
SMPD4-201ENST00000351288 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
SMPD4-201ENST00000351288 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
SMPD4-201ENST00000351288 SYCE3A1L190 88 aa12.54□□□□□ -0.4
SMPD4-201ENST00000351288 NASPP49321 788 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-201ENST00000351288 FKBP4Q02790 459 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMPD4-201ENST00000351288 BICDL1Q6ZP65 573 aa12.54□□□□□ -0.4
SMPD4-201ENST00000351288 TOMM22Q9NS69 142 aa12.54□□□□□ -0.4
SMPD4-201ENST00000351288 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-201ENST00000351288 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
SMPD4-201ENST00000351288 BICC1Q9H694 974 aaKnown RBP12.54□□□□□ -0.4
SMPD4-201ENST00000351288 LMBRD1Q9NUN5 540 aa12.54□□□□□ -0.4
SMPD4-201ENST00000351288 GRM8O00222 908 aa12.53□□□□□ -0.4
SMPD4-201ENST00000351288 WASHC4Q2M389 1173 aa12.53□□□□□ -0.4
SMPD4-201ENST00000351288 GPT2Q8TD30 523 aa12.53□□□□□ -0.4
SMPD4-201ENST00000351288 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
SMPD4-201ENST00000351288 EDC3Q96F86 508 aaKnown RBP12.53□□□□□ -0.4
SMPD4-201ENST00000351288 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
SMPD4-201ENST00000351288 KIF24Q5T7B8 1368 aa12.53□□□□□ -0.4
SMPD4-201ENST00000351288 IBTKQ9P2D0 1353 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-201ENST00000351288 APPP05067 770 aa12.52□□□□□ -0.4
SMPD4-201ENST00000351288 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-201ENST00000351288 NUCB2P80303 420 aa12.52□□□□□ -0.4
SMPD4-201ENST00000351288 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-201ENST00000351288 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.4
SMPD4-201ENST00000351288 LMBR1LQ6UX01 489 aa12.52□□□□□ -0.41
SMPD4-201ENST00000351288 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
SMPD4-201ENST00000351288 PIK3C2AO00443 1686 aa12.52□□□□□ -0.41
SMPD4-201ENST00000351288 RUFY2Q8WXA3 655 aa12.52□□□□□ -0.41
SMPD4-201ENST00000351288 ERBB3P21860 1342 aa12.52□□□□□ -0.41
SMPD4-201ENST00000351288 NRKQ7Z2Y5 1582 aa12.51□□□□□ -0.41
SMPD4-201ENST00000351288 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
SMPD4-201ENST00000351288 SUCLG2Q96I99 432 aa12.51□□□□□ -0.41
SMPD4-201ENST00000351288 JAKMIP1Q96N16 626 aaKnown RBP12.51□□□□□ -0.41
SMPD4-201ENST00000351288 CHGBP05060 677 aa12.51□□□□□ -0.41
SMPD4-201ENST00000351288 SKOR2Q2VWA4 1001 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-201ENST00000351288 BEND3Q5T5X7 828 aa12.51□□□□□ -0.41
SMPD4-201ENST00000351288 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
SMPD4-201ENST00000351288 RBSNQ9H1K0 784 aa12.51□□□□□ -0.41
SMPD4-201ENST00000351288 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
SMPD4-201ENST00000351288 TMEM63CQ9P1W3 806 aa12.51□□□□□ -0.41
SMPD4-201ENST00000351288 GADD45BO75293 160 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-201ENST00000351288 KLHL40Q2TBA0 621 aa12.5□□□□□ -0.41
SMPD4-201ENST00000351288 SALL3Q9BXA9 1300 aa12.5□□□□□ -0.41
SMPD4-201ENST00000351288 GOLGA6L4A6NEF3 574 aa12.5□□□□□ -0.41
SMPD4-201ENST00000351288 ESPNB1AK53 854 aa12.5□□□□□ -0.41
SMPD4-201ENST00000351288 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-201ENST00000351288 OSBPL3Q9H4L5 887 aa12.5□□□□□ -0.41
SMPD4-201ENST00000351288 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMPD4-201ENST00000351288 PTMAP06454 111 aaKnown RBP12.5□□□□□ -0.41
SMPD4-201ENST00000351288 PHKG2P15735 406 aa12.5□□□□□ -0.41
SMPD4-201ENST00000351288 CASTP20810 708 aaKnown RBP12.5□□□□□ -0.41
SMPD4-201ENST00000351288 SSH3Q8TE77 659 aa12.5□□□□□ -0.41
SMPD4-201ENST00000351288 CHMP4CQ96CF2 233 aa12.5□□□□□ -0.41
SMPD4-201ENST00000351288 PRKCSHP14314 528 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-201ENST00000351288 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 TLR7Q9NYK1 1049 aaKnown RBP12.49□□□□□ -0.41
SMPD4-201ENST00000351288 IL2RBP14784 551 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 CCDC57Q2TAC2 916 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
SMPD4-201ENST00000351288 PTH1RQ03431 593 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 HSP90AB3PQ58FF7 597 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 FERMT3Q86UX7 667 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 PI4K2BQ8TCG2 481 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 CNNM1Q9NRU3 951 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 ECHDC1Q9NTX5 307 aa12.49□□□□□ -0.41
SMPD4-201ENST00000351288 CYP27B1O15528 508 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 DCAF5Q96JK2 942 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 CYP2E1P05181 493 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-201ENST00000351288 KCNQ4P56696 695 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 TIMM10P62072 90 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 ADCK5Q3MIX3 580 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 EXOC5O00471 708 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 LARGE1O95461 756 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 NECAB1Q8N987 351 aa12.48□□□□□ -0.41
SMPD4-201ENST00000351288 TOPAZ1Q8N9V7 1692 aa12.47□□□□□ -0.41
SMPD4-201ENST00000351288 FIBPO43427 364 aa12.47□□□□□ -0.41
SMPD4-201ENST00000351288 FAM227BQ96M60 508 aa12.47□□□□□ -0.41
SMPD4-201ENST00000351288 LRRC2Q9BYS8 371 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms