RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TPM3P06753 285 aa22.29■■□□□ 1.16
SCARF1-202ENST00000348987 ATP8B2P98198 1209 aa22.28■■□□□ 1.16
SCARF1-202ENST00000348987 ZSCAN22P10073 491 aaPredicted RBP22.28■■□□□ 1.16
SCARF1-202ENST00000348987 PTGS1P23219 599 aa22.28■■□□□ 1.16
SCARF1-202ENST00000348987 NAA30Q147X3 362 aaPredicted RBP22.28■■□□□ 1.16
SCARF1-202ENST00000348987 IL1RAPL2Q9NP60 686 aa22.28■■□□□ 1.16
SCARF1-202ENST00000348987 GOLGA6L6A8MZA4 724 aa22.27■■□□□ 1.16
SCARF1-202ENST00000348987 TRIM6-TRIM34B2RNG4 842 aa22.27■■□□□ 1.16
SCARF1-202ENST00000348987 GNAI3P08754 354 aa22.27■■□□□ 1.16
SCARF1-202ENST00000348987 CHMLP26374 656 aa22.27■■□□□ 1.16
SCARF1-202ENST00000348987 PDE4CQ08493 712 aa22.27■■□□□ 1.16
SCARF1-202ENST00000348987 IL25Q9H293 177 aa22.27■■□□□ 1.16
SCARF1-202ENST00000348987 C16orf45Q96MC5 204 aaPredicted RBP22.27■■□□□ 1.15
SCARF1-202ENST00000348987 HTATSF1O43719 755 aaKnown RBP22.26■■□□□ 1.15
SCARF1-202ENST00000348987 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
SCARF1-202ENST00000348987 LARP6Q9BRS8 491 aaKnown RBP22.26■■□□□ 1.15
SCARF1-202ENST00000348987 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
SCARF1-202ENST00000348987 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
SCARF1-202ENST00000348987 SLFN14P0C7P3 912 aa22.25■■□□□ 1.15
SCARF1-202ENST00000348987 SYT1P21579 422 aa22.25■■□□□ 1.15
SCARF1-202ENST00000348987 BCL11BQ9C0K0 894 aaPredicted RBP22.25■■□□□ 1.15
SCARF1-202ENST00000348987 STX6O43752 255 aa22.24■■□□□ 1.15
SCARF1-202ENST00000348987 HDGFL1Q5TGJ6 251 aa22.24■■□□□ 1.15
SCARF1-202ENST00000348987 DTNBO60941 627 aa22.24■■□□□ 1.15
SCARF1-202ENST00000348987 EIF2S2P20042 333 aaKnown RBP22.24■■□□□ 1.15
SCARF1-202ENST00000348987 GABPB1Q06547 395 aaPredicted RBP22.24■■□□□ 1.15
SCARF1-202ENST00000348987 ESCO1Q5FWF5 840 aa22.24■■□□□ 1.15
SCARF1-202ENST00000348987 DDX41Q9UJV9 622 aaKnown RBP22.24■■□□□ 1.15
SCARF1-202ENST00000348987 SETD1BQ9UPS6 1966 aaKnown RBP22.23■■□□□ 1.15
SCARF1-202ENST00000348987 LRMPQ12912 555 aa22.23■■□□□ 1.15
SCARF1-202ENST00000348987 NUTM1Q86Y26 1132 aa22.23■■□□□ 1.15
SCARF1-202ENST00000348987 LGR6Q9HBX8 967 aa22.23■■□□□ 1.15
SCARF1-202ENST00000348987 PHF8Q9UPP1 1060 aa22.23■■□□□ 1.15
SCARF1-202ENST00000348987 VGLL3A8MV65 326 aa22.22■■□□□ 1.15
SCARF1-202ENST00000348987 MAP4K4O95819 1239 aaPredicted RBP22.22■■□□□ 1.15
SCARF1-202ENST00000348987 F13A1P00488 732 aa22.22■■□□□ 1.15
SCARF1-202ENST00000348987 UBTFL1P0CB47 393 aaPredicted RBP22.22■■□□□ 1.15
SCARF1-202ENST00000348987 XRN1Q8IZH2 1706 aaKnown RBP22.22■■□□□ 1.15
SCARF1-202ENST00000348987 CCDC186Q7Z3E2 898 aa22.22■■□□□ 1.15
SCARF1-202ENST00000348987 ANKLE2Q86XL3 938 aa22.22■■□□□ 1.15
SCARF1-202ENST00000348987 SMTNL1A8MU46 457 aa22.21■■□□□ 1.15
SCARF1-202ENST00000348987 ANXA1P04083 346 aa22.21■■□□□ 1.15
SCARF1-202ENST00000348987 KCNQ3O43525 872 aa22.21■■□□□ 1.15
SCARF1-202ENST00000348987 LRRC37A3O60309 1634 aa22.2■■□□□ 1.14
SCARF1-202ENST00000348987 TNNT1P13805 278 aa22.2■■□□□ 1.14
SCARF1-202ENST00000348987 DNM1Q05193 864 aaKnown RBP22.2■■□□□ 1.14
SCARF1-202ENST00000348987 SYCP1Q15431 976 aa22.2■■□□□ 1.14
SCARF1-202ENST00000348987 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.14
SCARF1-202ENST00000348987 NBPF7P0C2Y1 421 aaPredicted RBP22.2■■□□□ 1.14
SCARF1-202ENST00000348987 CCDC192P0DO97 292 aa22.2■■□□□ 1.14
SCARF1-202ENST00000348987 NBPF6Q5VWK0 638 aa22.2■■□□□ 1.14
SCARF1-202ENST00000348987 LMOD2Q6P5Q4 547 aa22.2■■□□□ 1.14
SCARF1-202ENST00000348987 PPP1R42Q7Z4L9 355 aa22.2■■□□□ 1.14
SCARF1-202ENST00000348987 NBPF4Q96M43 638 aa22.2■■□□□ 1.14
SCARF1-202ENST00000348987 STAP2Q9UGK3 403 aa22.19■■□□□ 1.14
SCARF1-202ENST00000348987 NRBP1Q9UHY1 535 aa22.19■■□□□ 1.14
SCARF1-202ENST00000348987 ORAI2Q96SN7 254 aa22.19■■□□□ 1.14
SCARF1-202ENST00000348987 MORC2Q9Y6X9 1032 aaPredicted RBP22.19■■□□□ 1.14
SCARF1-202ENST00000348987 LUZP1Q86V48 1076 aa22.18■■□□□ 1.14
SCARF1-202ENST00000348987 KIF18AQ8NI77 898 aa22.18■■□□□ 1.14
SCARF1-202ENST00000348987 IL17RAQ96F46 866 aa22.18■■□□□ 1.14
SCARF1-202ENST00000348987 NAP1L2Q9ULW6 460 aaPredicted RBP22.18■■□□□ 1.14
SCARF1-202ENST00000348987 SURF6O75683 361 aaKnown RBP22.18■■□□□ 1.14
SCARF1-202ENST00000348987 HSPA4P34932 840 aa22.18■■□□□ 1.14
SCARF1-202ENST00000348987 DRC7Q8IY82 874 aa22.18■■□□□ 1.14
SCARF1-202ENST00000348987 SSH3Q8TE77 659 aa22.18■■□□□ 1.14
SCARF1-202ENST00000348987 SOS1Q07889 1333 aaPredicted RBP22.18■■□□□ 1.14
SCARF1-202ENST00000348987 PSME1Q06323 249 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 CCDC112Q8NEF3 446 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 LRRC59Q96AG4 307 aaKnown RBP22.17■■□□□ 1.14
SCARF1-202ENST00000348987 CHPF2Q9P2E5 772 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 CHMP3Q9Y3E7 222 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 ATP6V1DQ9Y5K8 247 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 KCNJ4P48050 445 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 AK2P54819 239 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 TERF2Q15554 542 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 FAM200AQ8TCP9 573 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 SMC3Q9UQE7 1217 aa22.17■■□□□ 1.14
SCARF1-202ENST00000348987 MARF1Q9Y4F3 1742 aaKnown RBP22.17■■□□□ 1.14
SCARF1-202ENST00000348987 CAMK4Q16566 473 aa22.16■■□□□ 1.14
SCARF1-202ENST00000348987 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.15■■□□□ 1.14
SCARF1-202ENST00000348987 PI4KAP2A4QPH2 592 aa22.15■■□□□ 1.14
SCARF1-202ENST00000348987 SRGAP3O43295 1099 aa22.15■■□□□ 1.14
SCARF1-202ENST00000348987 RUFY3Q7L099 469 aa22.15■■□□□ 1.14
SCARF1-202ENST00000348987 PI4KAP1Q8N8J0 262 aa22.15■■□□□ 1.14
SCARF1-202ENST00000348987 EIF4A1P60842 406 aaKnown RBP22.14■■□□□ 1.14
SCARF1-202ENST00000348987 IRX5P78411 483 aaPredicted RBP22.14■■□□□ 1.14
SCARF1-202ENST00000348987 ZNF592Q92610 1267 aa22.14■■□□□ 1.14
SCARF1-202ENST00000348987 ZSCAN25Q6NSZ9 544 aa22.14■■□□□ 1.13
SCARF1-202ENST00000348987 TTC14Q96N46 770 aa22.14■■□□□ 1.13
SCARF1-202ENST00000348987 PAXBP1Q9Y5B6 917 aa22.14■■□□□ 1.13
SCARF1-202ENST00000348987 MRVI1Q9Y6F6 885 aa22.14■■□□□ 1.13
SCARF1-202ENST00000348987 CDK11BP21127 795 aaKnown RBP22.13■■□□□ 1.13
SCARF1-202ENST00000348987 ANKARQ7Z5J8 1434 aa22.13■■□□□ 1.13
SCARF1-202ENST00000348987 TUBGCP6Q96RT7 1819 aa22.13■■□□□ 1.13
SCARF1-202ENST00000348987 TPD52L1Q16890 204 aaPredicted RBP22.13■■□□□ 1.13
SCARF1-202ENST00000348987 RHPN1Q8TCX5 695 aa22.13■■□□□ 1.13
SCARF1-202ENST00000348987 LIMCH1Q9UPQ0 1083 aa22.13■■□□□ 1.13
SCARF1-202ENST00000348987 SNX14Q9Y5W7 946 aa22.13■■□□□ 1.13
SCARF1-202ENST00000348987 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms