RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 CFAP44Q96MT7 982 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 SMC3Q9UQE7 1217 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 PDE1AP54750 535 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 CCDC83Q8IWF9 413 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 TNMDQ9H2S6 317 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 MEIS3Q99687 375 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 TFIP11Q9UBB9 837 aaKnown RBP19.18■□□□□ 0.66
MBD1-204ENST00000347968 AGLP35573 1532 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 ABCC4O15439 1325 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 H2AFXP16104 143 aaPredicted RBP19.18■□□□□ 0.66
MBD1-204ENST00000347968 OAS2P29728 719 aaKnown RBP19.18■□□□□ 0.66
MBD1-204ENST00000347968 LMAN1P49257 510 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 CEP85Q6P2H3 762 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 PLA2G4DQ86XP0 818 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 UNC5CLQ8IV45 518 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.18■□□□□ 0.66
MBD1-204ENST00000347968 PRAM1Q96QH2 718 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 SETBP1Q9Y6X0 1596 aa19.18■□□□□ 0.66
MBD1-204ENST00000347968 ZNF165P49910 485 aa19.17■□□□□ 0.66
MBD1-204ENST00000347968 TWISTNBQ3B726 338 aaPredicted RBP19.17■□□□□ 0.66
MBD1-204ENST00000347968 NYAP1Q6ZVC0 841 aa19.17■□□□□ 0.66
MBD1-204ENST00000347968 TTC6Q86TZ1 520 aa19.17■□□□□ 0.66
MBD1-204ENST00000347968 CCDC69A6NI79 296 aa19.16■□□□□ 0.66
MBD1-204ENST00000347968 HTATSF1O43719 755 aaKnown RBP19.16■□□□□ 0.66
MBD1-204ENST00000347968 PRKAR2BP31323 418 aa19.16■□□□□ 0.66
MBD1-204ENST00000347968 TXLNBQ8N3L3 684 aa19.16■□□□□ 0.66
MBD1-204ENST00000347968 RRP15Q9Y3B9 282 aaKnown RBP19.16■□□□□ 0.66
MBD1-204ENST00000347968 QRICH2Q9H0J4 1663 aa19.16■□□□□ 0.66
MBD1-204ENST00000347968 ANKRD44Q8N8A2 993 aa19.16■□□□□ 0.66
MBD1-204ENST00000347968 AK2P54819 239 aa19.15■□□□□ 0.66
MBD1-204ENST00000347968 SKIDA1Q1XH10 827 aa19.15■□□□□ 0.66
MBD1-204ENST00000347968 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
MBD1-204ENST00000347968 CT47A1Q5JQC4 288 aaPredicted RBP19.15■□□□□ 0.66
MBD1-204ENST00000347968 TMCO3Q6UWJ1 677 aa19.15■□□□□ 0.66
MBD1-204ENST00000347968 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
MBD1-204ENST00000347968 RTL1A6NKG5 1358 aa19.15■□□□□ 0.66
MBD1-204ENST00000347968 GJB2P29033 226 aa19.14■□□□□ 0.66
MBD1-204ENST00000347968 FOXR1Q6PIV2 292 aa19.14■□□□□ 0.66
MBD1-204ENST00000347968 PACS2Q86VP3 889 aa19.14■□□□□ 0.66
MBD1-204ENST00000347968 YY1AP1Q9H869 796 aa19.14■□□□□ 0.66
MBD1-204ENST00000347968 RGS12O14924 1447 aa19.14■□□□□ 0.66
MBD1-204ENST00000347968 SASH3O75995 380 aa19.14■□□□□ 0.65
MBD1-204ENST00000347968 DCTN1Q14203 1278 aa19.14■□□□□ 0.65
MBD1-204ENST00000347968 REREQ9P2R6 1566 aa19.14■□□□□ 0.65
MBD1-204ENST00000347968 BRD2P25440 801 aaKnown RBP19.14■□□□□ 0.65
MBD1-204ENST00000347968 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
MBD1-204ENST00000347968 CCDC171Q6TFL3 1326 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 SRLQ86TD4 932 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 CCAR2Q8N163 923 aaKnown RBP19.13■□□□□ 0.65
MBD1-204ENST00000347968 NECAB1Q8N987 351 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 JRKLQ9Y4A0 524 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 IL16Q14005 1332 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 CASTP20810 708 aaKnown RBP19.13■□□□□ 0.65
MBD1-204ENST00000347968 SLFNL1Q499Z3 407 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 RUFY3Q7L099 469 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
MBD1-204ENST00000347968 FAM83GA6ND36 823 aa19.12■□□□□ 0.65
MBD1-204ENST00000347968 MTMR6Q9Y217 621 aa19.12■□□□□ 0.65
MBD1-204ENST00000347968 A2ML1A8K2U0 1454 aa19.12■□□□□ 0.65
MBD1-204ENST00000347968 CHMLP26374 656 aa19.12■□□□□ 0.65
MBD1-204ENST00000347968 TPM4P67936 248 aa19.12■□□□□ 0.65
MBD1-204ENST00000347968 MYCBPQ99417 103 aaPredicted RBP19.12■□□□□ 0.65
MBD1-204ENST00000347968 EVC2Q86UK5 1308 aa19.12■□□□□ 0.65
MBD1-204ENST00000347968 GOLGA6L4A6NEF3 574 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 LMOD3Q0VAK6 560 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 SNW1Q13573 536 aaKnown RBP19.11■□□□□ 0.65
MBD1-204ENST00000347968 MUM1L1Q5H9M0 696 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 ERCC4Q92889 916 aaPredicted RBP19.11■□□□□ 0.65
MBD1-204ENST00000347968 PLEKHA4Q9H4M7 779 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 KNDC1Q76NI1 1749 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 RIMS2Q9UQ26 1411 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 MYO3AQ8NEV4 1616 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 CCZ1BP86790 482 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 CCZ1P86791 482 aaPredicted RBP19.11■□□□□ 0.65
MBD1-204ENST00000347968 TSGA10IPQ3SY00 556 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 SLC4A10Q6U841 1118 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 RASEFQ8IZ41 740 aa19.11■□□□□ 0.65
MBD1-204ENST00000347968 MMP14P50281 582 aa19.1■□□□□ 0.65
MBD1-204ENST00000347968 FAM177A1Q8N128 213 aaPredicted RBP19.1■□□□□ 0.65
MBD1-204ENST00000347968 ARHGAP45Q92619 1136 aa19.1■□□□□ 0.65
MBD1-204ENST00000347968 NCAPGQ9BPX3 1015 aa19.1■□□□□ 0.65
MBD1-204ENST00000347968 API5Q9BZZ5 524 aaKnown RBP19.1■□□□□ 0.65
MBD1-204ENST00000347968 ADGRB2O60241 1585 aa19.1■□□□□ 0.65
MBD1-204ENST00000347968 NR1I2O75469 434 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 IFIT2P09913 472 aaKnown RBP19.09■□□□□ 0.65
MBD1-204ENST00000347968 UBXN4Q92575 508 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 PTCH1Q13635 1447 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 YTHDC2Q9H6S0 1430 aaKnown RBP19.09■□□□□ 0.65
MBD1-204ENST00000347968 TULP4Q9NRJ4 1543 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 ARHGEF28Q8N1W1 1705 aaKnown RBP19.09■□□□□ 0.65
MBD1-204ENST00000347968 C11orf57Q6ZUT1 292 aaPredicted RBP19.09■□□□□ 0.65
MBD1-204ENST00000347968 CREBRFQ8IUR6 639 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 GOLGA6L19H0YKK7 550 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 DIAPH1O60610 1272 aaKnown RBP19.09■□□□□ 0.65
MBD1-204ENST00000347968 GUCY2CP25092 1073 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 REXO1L1PQ8IX06 675 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 BANK1Q8NDB2 785 aa19.09■□□□□ 0.65
MBD1-204ENST00000347968 ATP6V1DQ9Y5K8 247 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms