RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 ELP1O95163 1332 aa12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 PSMA5P28066 241 aa12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 KRT85P78386 507 aa12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 CLASRPQ8N2M8 674 aaKnown RBP12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 TTC12Q9H892 705 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 SOX12O15370 315 aa12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 OS9Q13438 667 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 UTP14CQ5TAP6 766 aaKnown RBP12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 MTMR6Q9Y217 621 aa12.07□□□□□ -0.48
TRAPPC6B-202ENST00000347691 USP54Q70EL1 1684 aa12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 NGDNQ8NEJ9 315 aaKnown RBP12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 KIAA1524Q8TCG1 905 aa12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 FAM200AQ8TCP9 573 aa12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 IL25Q9H293 177 aa12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 MLECQ14165 292 aa12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
TRAPPC6B-202ENST00000347691 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 MTX1Q13505 466 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 MAP3K11Q16584 847 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 DNAAF4Q8WXU2 420 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 EVI5LQ96CN4 794 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ZNF830Q96NB3 372 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ECHDC1Q9NTX5 307 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 PIK3C2AO00443 1686 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ADGRL3Q9HAR2 1447 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 MAP4K4O95819 1239 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 DNM1Q05193 864 aaKnown RBP12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 IL17REQ8NFR9 667 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 SCAND2PQ9GZW5 306 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 NUP62CLQ9H1M0 184 aa12.05□□□□□ -0.48
TRAPPC6B-202ENST00000347691 CAVIN2O95810 425 aa12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 RNF20Q5VTR2 975 aa12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 DIP2AQ14689 1571 aa12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 VPS37CA5D8V6 355 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 HOXC9P31274 260 aa12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 DDX19AQ9NUU7 478 aaKnown RBP12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 PRDM4Q9UKN5 801 aa12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
TRAPPC6B-202ENST00000347691 GOLGA6L4A6NEF3 574 aa12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 IFIT2P09913 472 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ALDH8A1Q9H2A2 487 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 SPG7Q9UQ90 795 aa12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 ALDH1L1O75891 902 aa12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 NWD1Q149M9 1564 aa12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 SYCP1Q15431 976 aa12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 BEND3Q5T5X7 828 aa12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 KCNJ4P48050 445 aa12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 GTPBP4Q9BZE4 634 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-202ENST00000347691 CEMIPQ8WUJ3 1361 aa12.02□□□□□ -0.48
TRAPPC6B-202ENST00000347691 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.48
TRAPPC6B-202ENST00000347691 MED1Q15648 1581 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-202ENST00000347691 NUTM2FA1L443 756 aa12.02□□□□□ -0.49
TRAPPC6B-202ENST00000347691 NLRP6P59044 892 aa12.02□□□□□ -0.49
TRAPPC6B-202ENST00000347691 DMTNQ08495 405 aa12.02□□□□□ -0.49
TRAPPC6B-202ENST00000347691 EID1Q9Y6B2 187 aa12.02□□□□□ -0.49
TRAPPC6B-202ENST00000347691 KDM3BQ7LBC6 1761 aa12.02□□□□□ -0.49
TRAPPC6B-202ENST00000347691 NPHP3Q7Z494 1330 aa12.02□□□□□ -0.49
TRAPPC6B-202ENST00000347691 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 PDCL2Q8N4E4 241 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 TYRO3Q06418 890 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 ZNF710Q8N1W2 664 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 TNMDQ9H2S6 317 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 HMG20BQ9P0W2 317 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 LARGE1O95461 756 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 NBPF7P0C2Y1 421 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 EIF4A1P60842 406 aaKnown RBP12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 SNRKQ9NRH2 765 aa12.01□□□□□ -0.49
TRAPPC6B-202ENST00000347691 CREB3L3Q68CJ9 461 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 RBM8AQ9Y5S9 174 aaKnown RBP12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 PI4KAP2A4QPH2 592 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 CTIFO43310 598 aaKnown RBP12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 PTH1RQ03431 593 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 ME3Q16798 604 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 MPNDQ8N594 471 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 PI4KAP1Q8N8J0 262 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 MAP4K1Q92918 833 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 KCNF1Q9H3M0 494 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 SLIT1O75093 1534 aa12□□□□□ -0.49
TRAPPC6B-202ENST00000347691 BLOC1S2Q6QNY1 142 aa11.99□□□□□ -0.49
TRAPPC6B-202ENST00000347691 FEZ1Q99689 392 aa11.99□□□□□ -0.49
TRAPPC6B-202ENST00000347691 C9orf78Q9NZ63 289 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC6B-202ENST00000347691 EIF2S2P20042 333 aaKnown RBP11.99□□□□□ -0.49
TRAPPC6B-202ENST00000347691 KRT32Q14532 448 aa11.99□□□□□ -0.49
TRAPPC6B-202ENST00000347691 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
TRAPPC6B-202ENST00000347691 RBM43Q6ZSC3 357 aaKnown RBP11.99□□□□□ -0.49
TRAPPC6B-202ENST00000347691 ANKRD7Q92527 254 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms