RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 KCNJ4P48050 445 aa18.6■□□□□ 0.57
LRP8-202ENST00000347547 TPD52L1Q16890 204 aaPredicted RBP18.6■□□□□ 0.57
LRP8-202ENST00000347547 SH2B1Q9NRF2 756 aaPredicted RBP18.6■□□□□ 0.57
LRP8-202ENST00000347547 TULP2O00295 520 aa18.6■□□□□ 0.57
LRP8-202ENST00000347547 GNAI3P08754 354 aa18.6■□□□□ 0.57
LRP8-202ENST00000347547 RBM6P78332 1123 aaKnown RBP18.6■□□□□ 0.57
LRP8-202ENST00000347547 CDK11BP21127 795 aaKnown RBP18.59■□□□□ 0.57
LRP8-202ENST00000347547 DRC7Q8IY82 874 aa18.59■□□□□ 0.57
LRP8-202ENST00000347547 HYPKQ9NX55 129 aa18.59■□□□□ 0.57
LRP8-202ENST00000347547 NRBP1Q9UHY1 535 aa18.59■□□□□ 0.57
LRP8-202ENST00000347547 CEP170BQ9Y4F5 1589 aaPredicted RBP18.59■□□□□ 0.57
LRP8-202ENST00000347547 CAVIN2O95810 425 aa18.59■□□□□ 0.57
LRP8-202ENST00000347547 LTKP29376 864 aa18.59■□□□□ 0.57
LRP8-202ENST00000347547 TPRNQ4KMQ1 711 aa18.59■□□□□ 0.57
LRP8-202ENST00000347547 CACTINQ8WUQ7 758 aaKnown RBP18.59■□□□□ 0.57
LRP8-202ENST00000347547 ERO1AQ96HE7 468 aa18.59■□□□□ 0.57
LRP8-202ENST00000347547 TRIM5Q9C035 493 aa18.59■□□□□ 0.57
LRP8-202ENST00000347547 KRT85P78386 507 aa18.58■□□□□ 0.56
LRP8-202ENST00000347547 RNF20Q5VTR2 975 aa18.58■□□□□ 0.56
LRP8-202ENST00000347547 NYAP1Q6ZVC0 841 aa18.58■□□□□ 0.56
LRP8-202ENST00000347547 WAPLQ7Z5K2 1190 aa18.58■□□□□ 0.56
LRP8-202ENST00000347547 DDX19AQ9NUU7 478 aaKnown RBP18.58■□□□□ 0.56
LRP8-202ENST00000347547 CRB1P82279 1406 aa18.58■□□□□ 0.56
LRP8-202ENST00000347547 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.56
LRP8-202ENST00000347547 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
LRP8-202ENST00000347547 VPS53Q5VIR6 699 aa18.57■□□□□ 0.56
LRP8-202ENST00000347547 TTC6Q86TZ1 520 aa18.57■□□□□ 0.56
LRP8-202ENST00000347547 RASEFQ8IZ41 740 aa18.57■□□□□ 0.56
LRP8-202ENST00000347547 DNAJC2Q99543 621 aaKnown RBP18.57■□□□□ 0.56
LRP8-202ENST00000347547 KCND1Q9NSA2 647 aa18.57■□□□□ 0.56
LRP8-202ENST00000347547 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
LRP8-202ENST00000347547 ADGRL3Q9HAR2 1447 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 ZBTB22O15209 634 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 LIG1P18858 919 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 SLC4A10Q6U841 1118 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 KIF1BPQ96EK5 621 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 TM6SF1Q9BZW5 370 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 TNMDQ9H2S6 317 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 LARGE1O95461 756 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 SARM1Q6SZW1 724 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 CLIP2Q9UDT6 1046 aa18.56■□□□□ 0.56
LRP8-202ENST00000347547 ZNF215Q9UL58 517 aaPredicted RBP18.56■□□□□ 0.56
LRP8-202ENST00000347547 F6X3S4 739 aa18.55■□□□□ 0.56
LRP8-202ENST00000347547 HDGFP51858 240 aaKnown RBP18.55■□□□□ 0.56
LRP8-202ENST00000347547 G2E3Q7L622 706 aa18.55■□□□□ 0.56
LRP8-202ENST00000347547 CCDC83Q8IWF9 413 aa18.55■□□□□ 0.56
LRP8-202ENST00000347547 CLSTN2Q9H4D0 955 aa18.55■□□□□ 0.56
LRP8-202ENST00000347547 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
LRP8-202ENST00000347547 KCNB2Q92953 911 aa18.55■□□□□ 0.56
LRP8-202ENST00000347547 TSPYL1Q9H0U9 437 aa18.55■□□□□ 0.56
LRP8-202ENST00000347547 FBXO38Q6PIJ6 1188 aa18.54■□□□□ 0.56
LRP8-202ENST00000347547 LRRC8AQ8IWT6 810 aa18.54■□□□□ 0.56
LRP8-202ENST00000347547 PI4K2BQ8TCG2 481 aa18.54■□□□□ 0.56
LRP8-202ENST00000347547 CCDC144BQ3MJ40 725 aa18.54■□□□□ 0.56
LRP8-202ENST00000347547 CCDC144CPQ8IYA2 1237 aa18.54■□□□□ 0.56
LRP8-202ENST00000347547 SOS1Q07889 1333 aaPredicted RBP18.54■□□□□ 0.56
LRP8-202ENST00000347547 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
LRP8-202ENST00000347547 TTC21BQ7Z4L5 1316 aa18.54■□□□□ 0.56
LRP8-202ENST00000347547 N4BP2Q86UW6 1770 aaPredicted RBP18.53■□□□□ 0.56
LRP8-202ENST00000347547 RAB11FIP3O75154 756 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 PTPN14Q15678 1187 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 NME9Q86XW9 330 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 SIRT1Q96EB6 747 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 MRFAP1L1Q96HT8 127 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 SCAND2PQ9GZW5 306 aaPredicted RBP18.53■□□□□ 0.56
LRP8-202ENST00000347547 DIP2AQ14689 1571 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 KIF2AO00139 706 aaPredicted RBP18.53■□□□□ 0.56
LRP8-202ENST00000347547 CASTP20810 708 aaKnown RBP18.53■□□□□ 0.56
LRP8-202ENST00000347547 CAMK4Q16566 473 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 XRN1Q8IZH2 1706 aaKnown RBP18.53■□□□□ 0.56
LRP8-202ENST00000347547 ZSWIM6Q9HCJ5 1215 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 DACT1Q9NYF0 836 aa18.53■□□□□ 0.56
LRP8-202ENST00000347547 ERBB3P21860 1342 aa18.52■□□□□ 0.56
LRP8-202ENST00000347547 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.52■□□□□ 0.56
LRP8-202ENST00000347547 VPS37CA5D8V6 355 aaPredicted RBP18.52■□□□□ 0.56
LRP8-202ENST00000347547 ST3GAL1Q11201 340 aa18.52■□□□□ 0.56
LRP8-202ENST00000347547 MCM10Q7L590 875 aa18.52■□□□□ 0.56
LRP8-202ENST00000347547 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
LRP8-202ENST00000347547 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
LRP8-202ENST00000347547 PTPRUQ92729 1446 aa18.52■□□□□ 0.55
LRP8-202ENST00000347547 SLU7O95391 586 aaKnown RBP18.52■□□□□ 0.55
LRP8-202ENST00000347547 PDCP20941 246 aa18.52■□□□□ 0.55
LRP8-202ENST00000347547 CYP2C19P33261 490 aa18.52■□□□□ 0.55
LRP8-202ENST00000347547 ZNF165P49910 485 aa18.52■□□□□ 0.55
LRP8-202ENST00000347547 COG3Q96JB2 828 aa18.52■□□□□ 0.55
LRP8-202ENST00000347547 ITSN1Q15811 1721 aa18.51■□□□□ 0.55
LRP8-202ENST00000347547 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
LRP8-202ENST00000347547 CKAP2LQ8IYA6 745 aa18.51■□□□□ 0.55
LRP8-202ENST00000347547 CNTROBQ8N137 903 aa18.51■□□□□ 0.55
LRP8-202ENST00000347547 LARP6Q9BRS8 491 aaKnown RBP18.51■□□□□ 0.55
LRP8-202ENST00000347547 SETD1BQ9UPS6 1966 aaKnown RBP18.51■□□□□ 0.55
LRP8-202ENST00000347547 CHD2O14647 1828 aaKnown RBP18.51■□□□□ 0.55
LRP8-202ENST00000347547 H2AFXP16104 143 aaPredicted RBP18.5■□□□□ 0.55
LRP8-202ENST00000347547 BMS1Q14692 1282 aaKnown RBP18.5■□□□□ 0.55
LRP8-202ENST00000347547 SSH3Q8TE77 659 aa18.5■□□□□ 0.55
LRP8-202ENST00000347547 ZNF592Q92610 1267 aa18.5■□□□□ 0.55
LRP8-202ENST00000347547 ELF2Q15723 593 aa18.5■□□□□ 0.55
LRP8-202ENST00000347547 CYP46A1Q9Y6A2 500 aa18.5■□□□□ 0.55
LRP8-202ENST00000347547 ZNF446Q9NWS9 450 aa18.49■□□□□ 0.55
LRP8-202ENST00000347547 USP27XA6NNY8 438 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms