RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 C14orf37Q86TY3 774 aa21.29■■□□□ 1
VHL-202ENST00000345392 RHPN1Q8TCX5 695 aa21.29■■□□□ 1
VHL-202ENST00000345392 ATP6V1DQ9Y5K8 247 aa21.29■■□□□ 1
VHL-202ENST00000345392 TOPAZ1Q8N9V7 1692 aa21.29■■□□□ 1
VHL-202ENST00000345392 VPS37CA5D8V6 355 aaPredicted RBP21.28■■□□□ 1
VHL-202ENST00000345392 SSH3Q8TE77 659 aa21.28■■□□□ 1
VHL-202ENST00000345392 MTMR6Q9Y217 621 aa21.28■■□□□ 1
VHL-202ENST00000345392 AOX1Q06278 1338 aa21.28■■□□□ 1
VHL-202ENST00000345392 THEMISQ8N1K5 641 aaPredicted RBP21.27■■□□□ 1
VHL-202ENST00000345392 PHAXQ9H814 394 aaKnown RBP21.27■■□□□ 1
VHL-202ENST00000345392 SBNO1A3KN83 1393 aa21.27■■□□□ 1
VHL-202ENST00000345392 NALCNQ8IZF0 1738 aa21.27■■□□□ 1
VHL-202ENST00000345392 RGPD8O14715 1765 aaPredicted RBP21.27■■□□□ 1
VHL-202ENST00000345392 ADCK5Q3MIX3 580 aa21.27■■□□□ 1
VHL-202ENST00000345392 HYPKQ9NX55 129 aa21.27■■□□□ 1
VHL-202ENST00000345392 IGSF1Q8N6C5 1336 aa21.26■□□□□ 0.99
VHL-202ENST00000345392 EPB41L2O43491 1005 aaKnown RBP21.26■□□□□ 0.99
VHL-202ENST00000345392 IL17REQ8NFR9 667 aa21.26■□□□□ 0.99
VHL-202ENST00000345392 SETD1BQ9UPS6 1966 aaKnown RBP21.26■□□□□ 0.99
VHL-202ENST00000345392 CAMK4Q16566 473 aa21.26■□□□□ 0.99
VHL-202ENST00000345392 CNTROBQ8N137 903 aa21.26■□□□□ 0.99
VHL-202ENST00000345392 PDCL2Q8N4E4 241 aa21.26■□□□□ 0.99
VHL-202ENST00000345392 SRGAP3O43295 1099 aa21.25■□□□□ 0.99
VHL-202ENST00000345392 RBM33Q96EV2 1170 aaKnown RBP21.25■□□□□ 0.99
VHL-202ENST00000345392 GNAT3A8MTJ3 354 aa21.24■□□□□ 0.99
VHL-202ENST00000345392 PTH1RQ03431 593 aa21.24■□□□□ 0.99
VHL-202ENST00000345392 CHAF1AQ13111 956 aaPredicted RBP21.24■□□□□ 0.99
VHL-202ENST00000345392 NECAB1Q8N987 351 aa21.24■□□□□ 0.99
VHL-202ENST00000345392 JAKMIP1Q96N16 626 aaKnown RBP21.24■□□□□ 0.99
VHL-202ENST00000345392 PLEKHG1Q9ULL1 1385 aa21.24■□□□□ 0.99
VHL-202ENST00000345392 EIF2S2P20042 333 aaKnown RBP21.24■□□□□ 0.99
VHL-202ENST00000345392 PTGS1P23219 599 aa21.24■□□□□ 0.99
VHL-202ENST00000345392 UTP14CQ5TAP6 766 aaKnown RBP21.24■□□□□ 0.99
VHL-202ENST00000345392 FAM173BQ6P4H8 233 aa21.24■□□□□ 0.99
VHL-202ENST00000345392 KDRP35968 1356 aa21.24■□□□□ 0.99
VHL-202ENST00000345392 FMN2Q9NZ56 1722 aa21.24■□□□□ 0.99
VHL-202ENST00000345392 CCDC192P0DO97 292 aa21.23■□□□□ 0.99
VHL-202ENST00000345392 PRPF40BQ6NWY9 871 aaKnown RBP21.23■□□□□ 0.99
VHL-202ENST00000345392 DIAPH3Q9NSV4 1193 aa21.23■□□□□ 0.99
VHL-202ENST00000345392 PDRG1Q9NUG6 133 aa21.23■□□□□ 0.99
VHL-202ENST00000345392 RAB11FIP3O75154 756 aa21.23■□□□□ 0.99
VHL-202ENST00000345392 U2AF2P26368 475 aaKnown RBP eCLIP21.23■□□□□ 0.99
VHL-202ENST00000345392 FERMT3Q86UX7 667 aa21.23■□□□□ 0.99
VHL-202ENST00000345392 NBPF7P0C2Y1 421 aaPredicted RBP21.22■□□□□ 0.99
VHL-202ENST00000345392 HOXC9P31274 260 aa21.22■□□□□ 0.99
VHL-202ENST00000345392 LUZP1Q86V48 1076 aa21.22■□□□□ 0.99
VHL-202ENST00000345392 EID1Q9Y6B2 187 aa21.22■□□□□ 0.99
VHL-202ENST00000345392 TTC21AQ8NDW8 1320 aa21.22■□□□□ 0.99
VHL-202ENST00000345392 ANXA1P04083 346 aa21.22■□□□□ 0.99
VHL-202ENST00000345392 ST3GAL1Q11201 340 aa21.22■□□□□ 0.99
VHL-202ENST00000345392 KIF1BPQ96EK5 621 aa21.22■□□□□ 0.99
VHL-202ENST00000345392 ME3Q16798 604 aa21.21■□□□□ 0.99
VHL-202ENST00000345392 GOLGA6L6A8MZA4 724 aa21.21■□□□□ 0.99
VHL-202ENST00000345392 LIG1P18858 919 aa21.21■□□□□ 0.99
VHL-202ENST00000345392 POLA2Q14181 598 aa21.21■□□□□ 0.99
VHL-202ENST00000345392 TTC6Q86TZ1 520 aa21.21■□□□□ 0.99
VHL-202ENST00000345392 CKAP2LQ8IYA6 745 aa21.21■□□□□ 0.99
VHL-202ENST00000345392 XRN1Q8IZH2 1706 aaKnown RBP21.2■□□□□ 0.99
VHL-202ENST00000345392 IGSF3O75054 1194 aa21.2■□□□□ 0.98
VHL-202ENST00000345392 LRMPQ12912 555 aa21.2■□□□□ 0.98
VHL-202ENST00000345392 HDGFL1Q5TGJ6 251 aa21.2■□□□□ 0.98
VHL-202ENST00000345392 ABTB2Q8N961 1025 aa21.2■□□□□ 0.98
VHL-202ENST00000345392 COL9A3Q14050 684 aaPredicted RBP21.19■□□□□ 0.98
VHL-202ENST00000345392 PIK3C2AO00443 1686 aa21.19■□□□□ 0.98
VHL-202ENST00000345392 TPM3P06753 285 aa21.19■□□□□ 0.98
VHL-202ENST00000345392 FAM200AQ8TCP9 573 aa21.19■□□□□ 0.98
VHL-202ENST00000345392 NRBP1Q9UHY1 535 aa21.19■□□□□ 0.98
VHL-202ENST00000345392 MRVI1Q9Y6F6 885 aa21.19■□□□□ 0.98
VHL-202ENST00000345392 VPS53Q5VIR6 699 aa21.18■□□□□ 0.98
VHL-202ENST00000345392 LARP1BQ659C4 914 aaKnown RBP21.18■□□□□ 0.98
VHL-202ENST00000345392 CCDC186Q7Z3E2 898 aa21.18■□□□□ 0.98
VHL-202ENST00000345392 CYP46A1Q9Y6A2 500 aa21.18■□□□□ 0.98
VHL-202ENST00000345392 TYRO3Q06418 890 aa21.18■□□□□ 0.98
VHL-202ENST00000345392 OS9Q13438 667 aaPredicted RBP21.18■□□□□ 0.98
VHL-202ENST00000345392 MAP3K11Q16584 847 aa21.18■□□□□ 0.98
VHL-202ENST00000345392 ANKRD7Q92527 254 aa21.18■□□□□ 0.98
VHL-202ENST00000345392 CDC37L1Q7L3B6 337 aa21.17■□□□□ 0.98
VHL-202ENST00000345392 DRC7Q8IY82 874 aa21.17■□□□□ 0.98
VHL-202ENST00000345392 C16orf45Q96MC5 204 aaPredicted RBP21.17■□□□□ 0.98
VHL-202ENST00000345392 NUP62CLQ9H1M0 184 aa21.17■□□□□ 0.98
VHL-202ENST00000345392 KCNQ3O43525 872 aa21.17■□□□□ 0.98
VHL-202ENST00000345392 CTIFO43310 598 aaKnown RBP21.16■□□□□ 0.98
VHL-202ENST00000345392 TAF7Q15545 349 aaPredicted RBP21.16■□□□□ 0.98
VHL-202ENST00000345392 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
VHL-202ENST00000345392 ZSWIM6Q9HCJ5 1215 aa21.16■□□□□ 0.98
VHL-202ENST00000345392 TPCN1Q9ULQ1 816 aa21.16■□□□□ 0.98
VHL-202ENST00000345392 MAP3K5Q99683 1374 aa21.16■□□□□ 0.98
VHL-202ENST00000345392 DIP2AQ14689 1571 aa21.16■□□□□ 0.98
VHL-202ENST00000345392 FAM208AQ9UK61 1670 aaKnown RBP21.16■□□□□ 0.98
VHL-202ENST00000345392 KCNA6P17658 529 aa21.16■□□□□ 0.98
VHL-202ENST00000345392 TCEANC2Q96MN5 208 aa21.16■□□□□ 0.98
VHL-202ENST00000345392 TFIP11Q9UBB9 837 aaKnown RBP21.16■□□□□ 0.98
VHL-202ENST00000345392 KRT85P78386 507 aa21.15■□□□□ 0.98
VHL-202ENST00000345392 ANO6Q4KMQ2 910 aa21.15■□□□□ 0.98
VHL-202ENST00000345392 ANKLE2Q86XL3 938 aa21.15■□□□□ 0.98
VHL-202ENST00000345392 ZSCAN31Q96LW9 406 aaPredicted RBP21.15■□□□□ 0.98
VHL-202ENST00000345392 GTPBP4Q9BZE4 634 aaKnown RBP21.15■□□□□ 0.98
VHL-202ENST00000345392 LGR6Q9HBX8 967 aa21.15■□□□□ 0.98
VHL-202ENST00000345392 SH2B1Q9NRF2 756 aaPredicted RBP21.15■□□□□ 0.98
VHL-202ENST00000345392 DACT1Q9NYF0 836 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms