RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
SNX18-202ENST00000343017 PLCD3Q8N3E9 789 aa18.13■□□□□ 0.49
SNX18-202ENST00000343017 LSG1Q9H089 658 aaKnown RBP18.13■□□□□ 0.49
SNX18-202ENST00000343017 PREX1Q8TCU6 1659 aa18.13■□□□□ 0.49
SNX18-202ENST00000343017 SGSM2O43147 1006 aa18.13■□□□□ 0.49
SNX18-202ENST00000343017 ST3GAL1Q11201 340 aa18.13■□□□□ 0.49
SNX18-202ENST00000343017 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
SNX18-202ENST00000343017 RAD50Q92878 1312 aa18.13■□□□□ 0.49
SNX18-202ENST00000343017 CPSF1Q10570 1443 aaKnown RBP18.12■□□□□ 0.49
SNX18-202ENST00000343017 TRMT1Q9NXH9 659 aaKnown RBP18.12■□□□□ 0.49
SNX18-202ENST00000343017 CEP135Q66GS9 1140 aa18.12■□□□□ 0.49
SNX18-202ENST00000343017 IL17RAQ96F46 866 aa18.12■□□□□ 0.49
SNX18-202ENST00000343017 DNAJC25Q9H1X3 360 aa18.12■□□□□ 0.49
SNX18-202ENST00000343017 TNMDQ9H2S6 317 aa18.12■□□□□ 0.49
SNX18-202ENST00000343017 TAF3Q5VWG9 929 aa18.12■□□□□ 0.49
SNX18-202ENST00000343017 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
SNX18-202ENST00000343017 CLIP2Q9UDT6 1046 aa18.12■□□□□ 0.49
SNX18-202ENST00000343017 CDC37L1Q7L3B6 337 aa18.11■□□□□ 0.49
SNX18-202ENST00000343017 COG3Q96JB2 828 aa18.11■□□□□ 0.49
SNX18-202ENST00000343017 SSH2Q76I76 1423 aa18.11■□□□□ 0.49
SNX18-202ENST00000343017 EIF4A2Q14240 407 aaKnown RBP18.11■□□□□ 0.49
SNX18-202ENST00000343017 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
SNX18-202ENST00000343017 TSPYL4Q9UJ04 414 aa18.11■□□□□ 0.49
SNX18-202ENST00000343017 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
SNX18-202ENST00000343017 PTH1RQ03431 593 aa18.1■□□□□ 0.49
SNX18-202ENST00000343017 ME3Q16798 604 aa18.1■□□□□ 0.49
SNX18-202ENST00000343017 TCEANC2Q96MN5 208 aa18.1■□□□□ 0.49
SNX18-202ENST00000343017 A0A087WWV3 80 aa18.1■□□□□ 0.49
SNX18-202ENST00000343017 HAP1P54257 671 aaPredicted RBP18.1■□□□□ 0.49
SNX18-202ENST00000343017 ELF2Q15723 593 aa18.1■□□□□ 0.49
SNX18-202ENST00000343017 LARP1BQ659C4 914 aaKnown RBP18.1■□□□□ 0.49
SNX18-202ENST00000343017 PRPF40BQ6NWY9 871 aaKnown RBP18.1■□□□□ 0.49
SNX18-202ENST00000343017 KRT222Q8N1A0 295 aa18.1■□□□□ 0.49
SNX18-202ENST00000343017 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
SNX18-202ENST00000343017 SURF6O75683 361 aaKnown RBP18.09■□□□□ 0.49
SNX18-202ENST00000343017 FBXO38Q6PIJ6 1188 aa18.09■□□□□ 0.49
SNX18-202ENST00000343017 PLA2G4DQ86XP0 818 aa18.09■□□□□ 0.49
SNX18-202ENST00000343017 PAXBP1Q9Y5B6 917 aa18.09■□□□□ 0.49
SNX18-202ENST00000343017 METP08581 1390 aa18.09■□□□□ 0.49
SNX18-202ENST00000343017 A2ML1A8K2U0 1454 aa18.09■□□□□ 0.49
SNX18-202ENST00000343017 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
SNX18-202ENST00000343017 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
SNX18-202ENST00000343017 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
SNX18-202ENST00000343017 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
SNX18-202ENST00000343017 SYCP1Q15431 976 aa18.09■□□□□ 0.49
SNX18-202ENST00000343017 TNRQ92752 1358 aa18.08■□□□□ 0.49
SNX18-202ENST00000343017 ZNF165P49910 485 aa18.08■□□□□ 0.49
SNX18-202ENST00000343017 PI4K2BQ8TCG2 481 aa18.08■□□□□ 0.49
SNX18-202ENST00000343017 GOLGA6L4A6NEF3 574 aa18.07■□□□□ 0.48
SNX18-202ENST00000343017 NR1I2O75469 434 aa18.07■□□□□ 0.48
SNX18-202ENST00000343017 LTKP29376 864 aa18.07■□□□□ 0.48
SNX18-202ENST00000343017 KRT85P78386 507 aa18.07■□□□□ 0.48
SNX18-202ENST00000343017 FLIIQ13045 1269 aa18.07■□□□□ 0.48
SNX18-202ENST00000343017 GNAI3P08754 354 aa18.06■□□□□ 0.48
SNX18-202ENST00000343017 HSP90AB2PQ58FF8 381 aa18.06■□□□□ 0.48
SNX18-202ENST00000343017 ZNF397Q8NF99 534 aaPredicted RBP18.06■□□□□ 0.48
SNX18-202ENST00000343017 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
SNX18-202ENST00000343017 FILIP1Q7Z7B0 1213 aa18.06■□□□□ 0.48
SNX18-202ENST00000343017 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
SNX18-202ENST00000343017 USP44Q9H0E7 712 aa18.05■□□□□ 0.48
SNX18-202ENST00000343017 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
SNX18-202ENST00000343017 STK31Q9BXU1 1019 aa18.05■□□□□ 0.48
SNX18-202ENST00000343017 ZNF446Q9NWS9 450 aa18.05■□□□□ 0.48
SNX18-202ENST00000343017 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
SNX18-202ENST00000343017 PPP1R42Q7Z4L9 355 aa18.05■□□□□ 0.48
SNX18-202ENST00000343017 LRRC8AQ8IWT6 810 aa18.05■□□□□ 0.48
SNX18-202ENST00000343017 PTPN14Q15678 1187 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 GTF3C6Q969F1 213 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 SPATA32Q96LK8 384 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 CDK12Q9NYV4 1490 aaPredicted RBP18.04■□□□□ 0.48
SNX18-202ENST00000343017 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 STK3Q13188 491 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 LRRN4CLQ8ND94 238 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 RHPN1Q8TCX5 695 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 RBM33Q96EV2 1170 aaKnown RBP18.04■□□□□ 0.48
SNX18-202ENST00000343017 TIGD1Q96MW7 591 aa18.04■□□□□ 0.48
SNX18-202ENST00000343017 SKILP12757 684 aa18.03■□□□□ 0.48
SNX18-202ENST00000343017 TDRD7Q8NHU6 1098 aaKnown RBP18.03■□□□□ 0.48
SNX18-202ENST00000343017 CYP46A1Q9Y6A2 500 aa18.03■□□□□ 0.48
SNX18-202ENST00000343017 CAPN2P17655 700 aa18.03■□□□□ 0.48
SNX18-202ENST00000343017 TUBGCP6Q96RT7 1819 aa18.03■□□□□ 0.48
SNX18-202ENST00000343017 UBTFL1P0CB47 393 aaPredicted RBP18.03■□□□□ 0.48
SNX18-202ENST00000343017 CEBPZQ03701 1054 aaKnown RBP18.03■□□□□ 0.48
SNX18-202ENST00000343017 BICD2Q8TD16 824 aa18.03■□□□□ 0.48
SNX18-202ENST00000343017 CCDC66A2RUB6 948 aa18.02■□□□□ 0.48
SNX18-202ENST00000343017 LARP1Q6PKG0 1096 aaKnown RBP18.02■□□□□ 0.48
SNX18-202ENST00000343017 DDX11Q96FC9 970 aa18.02■□□□□ 0.48
SNX18-202ENST00000343017 PGBD1Q96JS3 809 aa18.02■□□□□ 0.48
SNX18-202ENST00000343017 MTHFSDQ2M296 383 aaKnown RBP18.02■□□□□ 0.47
SNX18-202ENST00000343017 CNTROBQ8N137 903 aa18.02■□□□□ 0.47
SNX18-202ENST00000343017 NUDT16Q96DE0 195 aaKnown RBP18.02■□□□□ 0.47
SNX18-202ENST00000343017 ERBB3P21860 1342 aa18.02■□□□□ 0.47
SNX18-202ENST00000343017 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.47
SNX18-202ENST00000343017 CRB1P82279 1406 aa18.02■□□□□ 0.47
SNX18-202ENST00000343017 WASLO00401 505 aaPredicted RBP18.01■□□□□ 0.47
SNX18-202ENST00000343017 C11orf57Q6ZUT1 292 aaPredicted RBP18.01■□□□□ 0.47
SNX18-202ENST00000343017 LEO1Q8WVC0 666 aaPredicted RBP18.01■□□□□ 0.47
SNX18-202ENST00000343017 CLSTN2Q9H4D0 955 aa18.01■□□□□ 0.47
SNX18-202ENST00000343017 ERCC6LQ2NKX8 1250 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms