RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 ATP10DQ9P241 1426 aa20.71■□□□□ 0.91
SNED1-202ENST00000342631 IRX6P78412 446 aaPredicted RBP20.7■□□□□ 0.91
SNED1-202ENST00000342631 FKBP8Q14318 412 aa20.7■□□□□ 0.91
SNED1-202ENST00000342631 TMEM57Q8N5G2 664 aa20.7■□□□□ 0.91
SNED1-202ENST00000342631 F6X3S4 739 aa20.7■□□□□ 0.9
SNED1-202ENST00000342631 MAP3K2Q9Y2U5 619 aa20.7■□□□□ 0.9
SNED1-202ENST00000342631 RGL2O15211 777 aa20.69■□□□□ 0.9
SNED1-202ENST00000342631 AK7Q96M32 723 aa20.69■□□□□ 0.9
SNED1-202ENST00000342631 CAMKK2Q96RR4 588 aa20.69■□□□□ 0.9
SNED1-202ENST00000342631 CRBNQ96SW2 442 aa20.69■□□□□ 0.9
SNED1-202ENST00000342631 COG6Q9Y2V7 657 aa20.69■□□□□ 0.9
SNED1-202ENST00000342631 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
SNED1-202ENST00000342631 IBTKQ9P2D0 1353 aaPredicted RBP20.69■□□□□ 0.9
SNED1-202ENST00000342631 COL15A1P39059 1388 aa20.69■□□□□ 0.9
SNED1-202ENST00000342631 ERVV-1B6SEH8 477 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 TTLL7Q6ZT98 887 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 ITPRIPQ8IWB1 547 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 ZNF330Q9Y3S2 320 aaPredicted RBP20.68■□□□□ 0.9
SNED1-202ENST00000342631 NUP188Q5SRE5 1749 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 ARFGEF2Q9Y6D5 1785 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 ADRA2BP18089 450 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 NEXNQ0ZGT2 675 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 SLC4A10Q6U841 1118 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 METTL22Q9BUU2 404 aaPredicted RBP20.68■□□□□ 0.9
SNED1-202ENST00000342631 MAP3K15Q6ZN16 1313 aa20.68■□□□□ 0.9
SNED1-202ENST00000342631 GNPATO15228 680 aa20.67■□□□□ 0.9
SNED1-202ENST00000342631 DZIP3Q86Y13 1208 aaKnown RBP20.67■□□□□ 0.9
SNED1-202ENST00000342631 LINS1Q8NG48 757 aa20.66■□□□□ 0.9
SNED1-202ENST00000342631 SRCIN1Q9C0H9 1055 aa20.66■□□□□ 0.9
SNED1-202ENST00000342631 ALDH1L1O75891 902 aa20.66■□□□□ 0.9
SNED1-202ENST00000342631 BEND3Q5T5X7 828 aa20.66■□□□□ 0.9
SNED1-202ENST00000342631 EN1Q05925 392 aaPredicted RBP20.65■□□□□ 0.9
SNED1-202ENST00000342631 HSP90AB3PQ58FF7 597 aa20.65■□□□□ 0.9
SNED1-202ENST00000342631 EXOC6Q8TAG9 804 aa20.65■□□□□ 0.9
SNED1-202ENST00000342631 UBR3Q6ZT12 1888 aa20.65■□□□□ 0.9
SNED1-202ENST00000342631 SSFA2P28290 1259 aa20.64■□□□□ 0.89
SNED1-202ENST00000342631 GIGYF2Q6Y7W6 1299 aaKnown RBP20.64■□□□□ 0.89
SNED1-202ENST00000342631 ZBTB3Q9H5J0 574 aa20.64■□□□□ 0.89
SNED1-202ENST00000342631 EZH2Q15910 746 aaKnown RBP20.63■□□□□ 0.89
SNED1-202ENST00000342631 ARXQ96QS3 562 aa20.63■□□□□ 0.89
SNED1-202ENST00000342631 GTF3C3Q9Y5Q9 886 aa20.63■□□□□ 0.89
SNED1-202ENST00000342631 ZBTB7BO15156 539 aaPredicted RBP20.63■□□□□ 0.89
SNED1-202ENST00000342631 TRAPPC3LQ5T215 181 aa20.63■□□□□ 0.89
SNED1-202ENST00000342631 CLEC4GQ6UXB4 293 aa20.63■□□□□ 0.89
SNED1-202ENST00000342631 TBC1D2BQ9UPU7 963 aa20.63■□□□□ 0.89
SNED1-202ENST00000342631 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
SNED1-202ENST00000342631 TRIM28Q13263 835 aaKnown RBP20.62■□□□□ 0.89
SNED1-202ENST00000342631 TCIRG1Q13488 830 aa20.62■□□□□ 0.89
SNED1-202ENST00000342631 AKT1S1Q96B36 256 aa20.62■□□□□ 0.89
SNED1-202ENST00000342631 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
SNED1-202ENST00000342631 NUP98P52948 1817 aa20.61■□□□□ 0.89
SNED1-202ENST00000342631 CAMTA2O94983 1202 aa20.61■□□□□ 0.89
SNED1-202ENST00000342631 FLAD1Q8NFF5 587 aa20.61■□□□□ 0.89
SNED1-202ENST00000342631 MYD88Q99836 296 aa20.61■□□□□ 0.89
SNED1-202ENST00000342631 NARFQ9UHQ1 456 aa20.61■□□□□ 0.89
SNED1-202ENST00000342631 ANKRD36CQ5JPF3 1778 aa20.61■□□□□ 0.89
SNED1-202ENST00000342631 IGKV5-2P06315 115 aa20.6■□□□□ 0.89
SNED1-202ENST00000342631 GNAI3P08754 354 aa20.6■□□□□ 0.89
SNED1-202ENST00000342631 ZBTB40Q9NUA8 1239 aa20.6■□□□□ 0.89
SNED1-202ENST00000342631 HDAC5Q9UQL6 1122 aa20.6■□□□□ 0.89
SNED1-202ENST00000342631 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
SNED1-202ENST00000342631 NEURL1BA8MQ27 555 aa20.59■□□□□ 0.89
SNED1-202ENST00000342631 ZPR1O75312 459 aa20.59■□□□□ 0.89
SNED1-202ENST00000342631 CCDC191Q8NCU4 936 aa20.59■□□□□ 0.89
SNED1-202ENST00000342631 ARHGEF1Q92888 912 aaKnown RBP20.59■□□□□ 0.89
SNED1-202ENST00000342631 ISCA1Q9BUE6 129 aa20.59■□□□□ 0.89
SNED1-202ENST00000342631 AFDNP55196 1824 aaKnown RBP20.59■□□□□ 0.89
SNED1-202ENST00000342631 C4AP0C0L4 1744 aa20.59■□□□□ 0.89
SNED1-202ENST00000342631 RFC4P35249 363 aa20.59■□□□□ 0.89
SNED1-202ENST00000342631 DEFB132Q7Z7B7 95 aa20.59■□□□□ 0.89
SNED1-202ENST00000342631 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.88
SNED1-202ENST00000342631 TFCP2L1Q9NZI6 479 aa20.58■□□□□ 0.88
SNED1-202ENST00000342631 GCKRQ14397 625 aa20.57■□□□□ 0.88
SNED1-202ENST00000342631 HLFQ16534 295 aa20.57■□□□□ 0.88
SNED1-202ENST00000342631 CWF19L2Q2TBE0 894 aaKnown RBP20.57■□□□□ 0.88
SNED1-202ENST00000342631 UPF1Q92900 1129 aaKnown RBP eCLIP20.57■□□□□ 0.88
SNED1-202ENST00000342631 USP44Q9H0E7 712 aa20.57■□□□□ 0.88
SNED1-202ENST00000342631 USP42Q9H9J4 1324 aaKnown RBP20.57■□□□□ 0.88
SNED1-202ENST00000342631 ZNF827Q17R98 1081 aa20.57■□□□□ 0.88
SNED1-202ENST00000342631 CWC25Q9NXE8 425 aaPredicted RBP20.57■□□□□ 0.88
SNED1-202ENST00000342631 PPP4R2Q9NY27 417 aa20.57■□□□□ 0.88
SNED1-202ENST00000342631 QSER1Q2KHR3 1735 aa20.56■□□□□ 0.88
SNED1-202ENST00000342631 UTYO14607 1347 aa20.56■□□□□ 0.88
SNED1-202ENST00000342631 ZNF34Q8IZ26 560 aa20.56■□□□□ 0.88
SNED1-202ENST00000342631 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
SNED1-202ENST00000342631 C9orf78Q9NZ63 289 aaPredicted RBP20.56■□□□□ 0.88
SNED1-202ENST00000342631 GRM8O00222 908 aa20.55■□□□□ 0.88
SNED1-202ENST00000342631 PHF14O94880 888 aa20.55■□□□□ 0.88
SNED1-202ENST00000342631 AMIGO3Q86WK7 504 aa20.55■□□□□ 0.88
SNED1-202ENST00000342631 MEIS3Q99687 375 aa20.55■□□□□ 0.88
SNED1-202ENST00000342631 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
SNED1-202ENST00000342631 SLC15A2Q16348 729 aa20.55■□□□□ 0.88
SNED1-202ENST00000342631 PARP10Q53GL7 1025 aa20.55■□□□□ 0.88
SNED1-202ENST00000342631 UBTFL1P0CB47 393 aaPredicted RBP20.54■□□□□ 0.88
SNED1-202ENST00000342631 USPL1Q5W0Q7 1092 aa20.54■□□□□ 0.88
SNED1-202ENST00000342631 TUBGCP6Q96RT7 1819 aa20.54■□□□□ 0.88
SNED1-202ENST00000342631 GNAI2P04899 355 aa20.53■□□□□ 0.88
SNED1-202ENST00000342631 NLRP10Q86W26 655 aa20.53■□□□□ 0.88
SNED1-202ENST00000342631 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.88
SNED1-202ENST00000342631 SRP68Q9UHB9 627 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms