RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 C9orf78Q9NZ63 289 aaPredicted RBP19.03■□□□□ 0.64
PDE8B-204ENST00000342343 HEG1Q9ULI3 1381 aa19.03■□□□□ 0.64
PDE8B-204ENST00000342343 CSPP1Q1MSJ5 1256 aa19.03■□□□□ 0.64
PDE8B-204ENST00000342343 TMX3Q96JJ7 454 aa19.03■□□□□ 0.64
PDE8B-204ENST00000342343 TMEM63CQ9P1W3 806 aa19.03■□□□□ 0.64
PDE8B-204ENST00000342343 KSR2Q6VAB6 950 aa19.02■□□□□ 0.64
PDE8B-204ENST00000342343 FAM13BQ9NYF5 915 aa19.02■□□□□ 0.64
PDE8B-204ENST00000342343 SYCE3A1L190 88 aa19.02■□□□□ 0.63
PDE8B-204ENST00000342343 OS9Q13438 667 aaPredicted RBP19.01■□□□□ 0.63
PDE8B-204ENST00000342343 CCDC39Q9UFE4 941 aa19.01■□□□□ 0.63
PDE8B-204ENST00000342343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.01■□□□□ 0.63
PDE8B-204ENST00000342343 PDIA6Q15084 440 aa19■□□□□ 0.63
PDE8B-204ENST00000342343 AOX1Q06278 1338 aa19■□□□□ 0.63
PDE8B-204ENST00000342343 MBD3O95983 291 aa19■□□□□ 0.63
PDE8B-204ENST00000342343 PIP4K2AP48426 406 aaPredicted RBP19■□□□□ 0.63
PDE8B-204ENST00000342343 CHRNA2Q15822 529 aa19■□□□□ 0.63
PDE8B-204ENST00000342343 NFATC2IPQ8NCF5 419 aa19■□□□□ 0.63
PDE8B-204ENST00000342343 MYL6BP14649 208 aa18.99■□□□□ 0.63
PDE8B-204ENST00000342343 KAZALD1Q96I82 304 aa18.99■□□□□ 0.63
PDE8B-204ENST00000342343 UQCRHLA0A096LP55 91 aa18.98■□□□□ 0.63
PDE8B-204ENST00000342343 UQCRHP07919 91 aa18.98■□□□□ 0.63
PDE8B-204ENST00000342343 MCCP23508 829 aa18.98■□□□□ 0.63
PDE8B-204ENST00000342343 RAPGEF4Q8WZA2 1011 aa18.98■□□□□ 0.63
PDE8B-204ENST00000342343 SUCLG2Q96I99 432 aa18.98■□□□□ 0.63
PDE8B-204ENST00000342343 NSFL1CQ9UNZ2 370 aaKnown RBP18.98■□□□□ 0.63
PDE8B-204ENST00000342343 ZNF790Q6PG37 636 aa18.98■□□□□ 0.63
PDE8B-204ENST00000342343 CHMP4AQ9BY43 222 aa18.98■□□□□ 0.63
PDE8B-204ENST00000342343 CWC27Q6UX04 472 aaKnown RBP18.97■□□□□ 0.63
PDE8B-204ENST00000342343 SIPA1L3O60292 1781 aaPredicted RBP18.97■□□□□ 0.63
PDE8B-204ENST00000342343 MTX1Q13505 466 aa18.97■□□□□ 0.63
PDE8B-204ENST00000342343 HYPKQ9NX55 129 aa18.97■□□□□ 0.63
PDE8B-204ENST00000342343 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
PDE8B-204ENST00000342343 ALDH1L1O75891 902 aa18.97■□□□□ 0.63
PDE8B-204ENST00000342343 ATF3P18847 181 aa18.97■□□□□ 0.63
PDE8B-204ENST00000342343 MCM2P49736 904 aa18.97■□□□□ 0.63
PDE8B-204ENST00000342343 DDX21Q9NR30 783 aaKnown RBP eCLIP18.97■□□□□ 0.63
PDE8B-204ENST00000342343 SPG7Q9UQ90 795 aa18.97■□□□□ 0.63
PDE8B-204ENST00000342343 TMEM94Q12767 1356 aa18.97■□□□□ 0.63
PDE8B-204ENST00000342343 KDM6AO15550 1401 aaPredicted RBP18.96■□□□□ 0.63
PDE8B-204ENST00000342343 SGSM2O43147 1006 aa18.96■□□□□ 0.63
PDE8B-204ENST00000342343 NPHP3Q7Z494 1330 aa18.96■□□□□ 0.63
PDE8B-204ENST00000342343 BICC1Q9H694 974 aaKnown RBP18.96■□□□□ 0.63
PDE8B-204ENST00000342343 IGKV5-2P06315 115 aa18.96■□□□□ 0.63
PDE8B-204ENST00000342343 CSB-PGBD3P0DP91 1061 aa18.96■□□□□ 0.63
PDE8B-204ENST00000342343 HSPA4P34932 840 aa18.96■□□□□ 0.63
PDE8B-204ENST00000342343 JARID2Q92833 1246 aaPredicted RBP18.96■□□□□ 0.63
PDE8B-204ENST00000342343 SLC52A2Q9HAB3 445 aa18.96■□□□□ 0.63
PDE8B-204ENST00000342343 OVOS2A0A0G2JMS6 1433 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 PHKG2P15735 406 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 ANAPC15P60006 121 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 RNF214Q8ND24 703 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 KLHDC4Q8TBB5 520 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 LARP6Q9BRS8 491 aaKnown RBP18.95■□□□□ 0.62
PDE8B-204ENST00000342343 MEGF6O75095 1541 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 GRM8O00222 908 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 DYNC1I1O14576 645 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 RASEFQ8IZ41 740 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 CNTROBQ8N137 903 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 LINS1Q8NG48 757 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 ZNF496Q96IT1 587 aaPredicted RBP18.95■□□□□ 0.62
PDE8B-204ENST00000342343 ALS2Q96Q42 1657 aa18.95■□□□□ 0.62
PDE8B-204ENST00000342343 BRD1O95696 1058 aa18.94■□□□□ 0.62
PDE8B-204ENST00000342343 HSP90AB4PQ58FF6 505 aa18.94■□□□□ 0.62
PDE8B-204ENST00000342343 MTERF4Q7Z6M4 381 aaKnown RBP18.94■□□□□ 0.62
PDE8B-204ENST00000342343 CLASRPQ8N2M8 674 aaKnown RBP18.94■□□□□ 0.62
PDE8B-204ENST00000342343 MST1RQ04912 1400 aa18.94■□□□□ 0.62
PDE8B-204ENST00000342343 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
PDE8B-204ENST00000342343 RIC3Q7Z5B4 369 aa18.94■□□□□ 0.62
PDE8B-204ENST00000342343 LSG1Q9H089 658 aaKnown RBP18.94■□□□□ 0.62
PDE8B-204ENST00000342343 USP16Q9Y5T5 823 aa18.94■□□□□ 0.62
PDE8B-204ENST00000342343 CUL4AQ13619 759 aa18.93■□□□□ 0.62
PDE8B-204ENST00000342343 XAGE3Q8WTP9 111 aa18.93■□□□□ 0.62
PDE8B-204ENST00000342343 SIL1Q9H173 461 aa18.93■□□□□ 0.62
PDE8B-204ENST00000342343 SASH1O94885 1247 aa18.93■□□□□ 0.62
PDE8B-204ENST00000342343 COPS6Q7L5N1 327 aa18.93■□□□□ 0.62
PDE8B-204ENST00000342343 CYP27B1O15528 508 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 SASS6Q6UVJ0 657 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 SYAP1Q96A49 352 aaPredicted RBP18.92■□□□□ 0.62
PDE8B-204ENST00000342343 TSPY26PQ9H489 355 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 SNX14Q9Y5W7 946 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 RAD50Q92878 1312 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 DTNBO60941 627 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
PDE8B-204ENST00000342343 CPA1P15085 419 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 AACSQ86V21 672 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 CCDC8Q9H0W5 538 aaPredicted RBP18.92■□□□□ 0.62
PDE8B-204ENST00000342343 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
PDE8B-204ENST00000342343 C5P01031 1676 aa18.91■□□□□ 0.62
PDE8B-204ENST00000342343 EPHA10Q5JZY3 1008 aa18.91■□□□□ 0.62
PDE8B-204ENST00000342343 TLR7Q9NYK1 1049 aaKnown RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 USP42Q9H9J4 1324 aaKnown RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
PDE8B-204ENST00000342343 GLRX3O76003 335 aaKnown RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 DDX58O95786 925 aaKnown RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 IFIT2P09913 472 aaKnown RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 FOXD4L6Q3SYB3 417 aaPredicted RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 FOXD4L3Q6VB84 417 aaPredicted RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 EAF2Q96CJ1 260 aaPredicted RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 INTS4Q96HW7 963 aaKnown RBP18.91■□□□□ 0.62
PDE8B-204ENST00000342343 ADAMTS7Q9UKP4 1686 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms