RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ZNF622Q969S3 477 aaKnown RBP eCLIP21.83■■□□□ 1.08
SMPD1-201ENST00000342245 ZBTB9Q96C00 473 aa21.83■■□□□ 1.08
SMPD1-201ENST00000342245 NPM1P06748 294 aaKnown RBP eCLIP21.82■■□□□ 1.08
SMPD1-201ENST00000342245 GSDMDP57764 484 aa21.82■■□□□ 1.08
SMPD1-201ENST00000342245 CCDC93Q567U6 631 aa21.82■■□□□ 1.08
SMPD1-201ENST00000342245 C10orf67Q8IYJ2 551 aa21.82■■□□□ 1.08
SMPD1-201ENST00000342245 TTC14Q96N46 770 aa21.82■■□□□ 1.08
SMPD1-201ENST00000342245 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
SMPD1-201ENST00000342245 GOLGA6L19H0YKK7 550 aa21.82■■□□□ 1.08
SMPD1-201ENST00000342245 ERCC6LQ2NKX8 1250 aa21.82■■□□□ 1.08
SMPD1-201ENST00000342245 SRRTQ9BXP5 876 aaKnown RBP21.82■■□□□ 1.08
SMPD1-201ENST00000342245 SALL3Q9BXA9 1300 aa21.82■■□□□ 1.08
SMPD1-201ENST00000342245 CPSF1Q10570 1443 aaKnown RBP21.82■■□□□ 1.08
SMPD1-201ENST00000342245 A0A1B0GUL7 405 aa21.81■■□□□ 1.08
SMPD1-201ENST00000342245 USP27XA6NNY8 438 aa21.81■■□□□ 1.08
SMPD1-201ENST00000342245 SRLQ86TD4 932 aa21.81■■□□□ 1.08
SMPD1-201ENST00000342245 ZSCAN31Q96LW9 406 aaPredicted RBP21.81■■□□□ 1.08
SMPD1-201ENST00000342245 CLSTN2Q9H4D0 955 aa21.81■■□□□ 1.08
SMPD1-201ENST00000342245 LMTK2Q8IWU2 1503 aa21.81■■□□□ 1.08
SMPD1-201ENST00000342245 AOX1Q06278 1338 aa21.81■■□□□ 1.08
SMPD1-201ENST00000342245 CFAP65Q6ZU64 1925 aaKnown RBP21.81■■□□□ 1.08
SMPD1-201ENST00000342245 TTC21BQ7Z4L5 1316 aa21.81■■□□□ 1.08
SMPD1-201ENST00000342245 APBB1O00213 710 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 PRKAR2BP31323 418 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 KCNJ6P48051 423 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 SNW1Q13573 536 aaKnown RBP21.8■■□□□ 1.08
SMPD1-201ENST00000342245 EXOC4Q96A65 974 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 TULP4Q9NRJ4 1543 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 NPATQ14207 1427 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 LOC102724159A0A0B4J2E5 919 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 PWP2Q15269 919 aaKnown RBP21.8■■□□□ 1.08
SMPD1-201ENST00000342245 ARHGAP29Q52LW3 1261 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 TMEM132EQ6IEE7 984 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 SIRT1Q96EB6 747 aa21.8■■□□□ 1.08
SMPD1-201ENST00000342245 SCAND2PQ9GZW5 306 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-201ENST00000342245 SH2B1Q9NRF2 756 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-201ENST00000342245 IVLP07476 585 aa21.79■■□□□ 1.08
SMPD1-201ENST00000342245 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMPD1-201ENST00000342245 ADGRB3O60242 1522 aa21.79■■□□□ 1.08
SMPD1-201ENST00000342245 NPHP3Q7Z494 1330 aa21.79■■□□□ 1.08
SMPD1-201ENST00000342245 GOLGA6L4A6NEF3 574 aa21.79■■□□□ 1.08
SMPD1-201ENST00000342245 CCZ1BP86790 482 aa21.79■■□□□ 1.08
SMPD1-201ENST00000342245 CCZ1P86791 482 aaPredicted RBP21.79■■□□□ 1.08
SMPD1-201ENST00000342245 CCDC69A6NI79 296 aa21.78■■□□□ 1.08
SMPD1-201ENST00000342245 UBXN4Q92575 508 aa21.78■■□□□ 1.08
SMPD1-201ENST00000342245 SMARCE1Q969G3 411 aa21.78■■□□□ 1.08
SMPD1-201ENST00000342245 STAP2Q9UGK3 403 aa21.78■■□□□ 1.08
SMPD1-201ENST00000342245 PSDA5PKW4 1024 aaPredicted RBP21.78■■□□□ 1.08
SMPD1-201ENST00000342245 APPP05067 770 aa21.78■■□□□ 1.08
SMPD1-201ENST00000342245 AK2P54819 239 aa21.78■■□□□ 1.08
SMPD1-201ENST00000342245 FRMPD1Q5SYB0 1578 aa21.77■■□□□ 1.08
SMPD1-201ENST00000342245 POLR3GO15318 223 aaPredicted RBP21.77■■□□□ 1.08
SMPD1-201ENST00000342245 GJB2P29033 226 aa21.77■■□□□ 1.08
SMPD1-201ENST00000342245 CAMK4Q16566 473 aa21.77■■□□□ 1.08
SMPD1-201ENST00000342245 RRP15Q9Y3B9 282 aaKnown RBP21.77■■□□□ 1.08
SMPD1-201ENST00000342245 ELL2O00472 640 aaPredicted RBP21.77■■□□□ 1.07
SMPD1-201ENST00000342245 TRIM66O15016 1216 aa21.77■■□□□ 1.07
SMPD1-201ENST00000342245 CCP110O43303 1012 aa21.77■■□□□ 1.07
SMPD1-201ENST00000342245 IMPACTQ9P2X3 320 aa21.77■■□□□ 1.07
SMPD1-201ENST00000342245 ORC3Q9UBD5 711 aaPredicted RBP21.77■■□□□ 1.07
SMPD1-201ENST00000342245 POGZQ7Z3K3 1410 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 A0A1W2PP64 1363 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 MSH6P52701 1360 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 TTC21AQ8NDW8 1320 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 ADGRL3Q9HAR2 1447 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 LIG1P18858 919 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 NUTM2DQ5VT03 806 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-201ENST00000342245 TTC6Q86TZ1 520 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 DACT1Q9NYF0 836 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 PLEKHG2Q9H7P9 1386 aa21.76■■□□□ 1.07
SMPD1-201ENST00000342245 NRDCO43847 1150 aa21.75■■□□□ 1.07
SMPD1-201ENST00000342245 RUFY3Q7L099 469 aa21.75■■□□□ 1.07
SMPD1-201ENST00000342245 CKAP2LQ8IYA6 745 aa21.75■■□□□ 1.07
SMPD1-201ENST00000342245 RILPL2Q969X0 211 aa21.75■■□□□ 1.07
SMPD1-201ENST00000342245 JRKLQ9Y4A0 524 aa21.75■■□□□ 1.07
SMPD1-201ENST00000342245 PDCP20941 246 aa21.75■■□□□ 1.07
SMPD1-201ENST00000342245 CCDC158Q5M9N0 1113 aa21.75■■□□□ 1.07
SMPD1-201ENST00000342245 LRRCC1Q9C099 1032 aa21.75■■□□□ 1.07
SMPD1-201ENST00000342245 CDK12Q9NYV4 1490 aaPredicted RBP21.75■■□□□ 1.07
SMPD1-201ENST00000342245 CASTP20810 708 aaKnown RBP21.74■■□□□ 1.07
SMPD1-201ENST00000342245 MAGEA9P43362 315 aa21.74■■□□□ 1.07
SMPD1-201ENST00000342245 TTC31Q49AM3 519 aaPredicted RBP21.74■■□□□ 1.07
SMPD1-201ENST00000342245 GGNBP2Q9H3C7 697 aa21.74■■□□□ 1.07
SMPD1-201ENST00000342245 LCMT1Q9UIC8 334 aa21.74■■□□□ 1.07
SMPD1-201ENST00000342245 NPHP1O15259 732 aa21.74■■□□□ 1.07
SMPD1-201ENST00000342245 CHMP4CQ96CF2 233 aa21.74■■□□□ 1.07
SMPD1-201ENST00000342245 TRMT1Q9NXH9 659 aaKnown RBP21.74■■□□□ 1.07
SMPD1-201ENST00000342245 SNX14Q9Y5W7 946 aa21.74■■□□□ 1.07
SMPD1-201ENST00000342245 PPLO60437 1756 aa21.74■■□□□ 1.07
SMPD1-201ENST00000342245 OAS2P29728 719 aaKnown RBP21.73■■□□□ 1.07
SMPD1-201ENST00000342245 SLC52A1Q9NWF4 448 aa21.73■■□□□ 1.07
SMPD1-201ENST00000342245 ST5P78524 1137 aa21.73■■□□□ 1.07
SMPD1-201ENST00000342245 DNAJC25Q9H1X3 360 aa21.73■■□□□ 1.07
SMPD1-201ENST00000342245 TERF2IPQ9NYB0 399 aa21.73■■□□□ 1.07
SMPD1-201ENST00000342245 PHLPP2Q6ZVD8 1323 aa21.73■■□□□ 1.07
SMPD1-201ENST00000342245 EFCAB8A8MWE9 144 aa21.72■■□□□ 1.07
SMPD1-201ENST00000342245 ACTN2P35609 894 aa21.72■■□□□ 1.07
SMPD1-201ENST00000342245 RAPGEF3O95398 923 aa21.72■■□□□ 1.07
SMPD1-201ENST00000342245 SMC1AQ14683 1233 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms